RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 ZNF815PA8K554 130 aa20.81■□□□□ 0.92
CBX4-201ENST00000269397 HOXA3O43365 443 aaPredicted RBP20.81■□□□□ 0.92
CBX4-201ENST00000269397 KLK9Q2XQG4 91 aa20.81■□□□□ 0.92
CBX4-201ENST00000269397 KLK9Q9UKQ9 250 aa20.81■□□□□ 0.92
CBX4-201ENST00000269397 ASIPP42127 132 aa20.81■□□□□ 0.92
CBX4-201ENST00000269397 SCGB1D4Q6XE38 83 aa20.81■□□□□ 0.92
CBX4-201ENST00000269397 C9orf139Q6ZV77 190 aa20.81■□□□□ 0.92
CBX4-201ENST00000269397 SLC25A16P16260 332 aa20.8■□□□□ 0.92
CBX4-201ENST00000269397 ARL3P36405 182 aa20.8■□□□□ 0.92
CBX4-201ENST00000269397 OR10J6PQ8NGY7 276 aa20.8■□□□□ 0.92
CBX4-201ENST00000269397 TRAV21A0A0B4J279 112 aa20.8■□□□□ 0.92
CBX4-201ENST00000269397 J3QR89 54 aa20.8■□□□□ 0.92
CBX4-201ENST00000269397 SPOCK3Q9BQ16 436 aa20.8■□□□□ 0.92
CBX4-201ENST00000269397 MRPL16Q9NX20 251 aaKnown RBP20.8■□□□□ 0.92
CBX4-201ENST00000269397 A0A1B0GWB2 263 aa20.79■□□□□ 0.92
CBX4-201ENST00000269397 C20orf78Q9BR46 151 aa20.79■□□□□ 0.92
CBX4-201ENST00000269397 TRAV41A0A0B4J266 112 aa20.79■□□□□ 0.92
CBX4-201ENST00000269397 DUSP14O95147 198 aaKnown RBP20.79■□□□□ 0.92
CBX4-201ENST00000269397 MUC4Q99102 2169 aa20.78■□□□□ 0.92
CBX4-201ENST00000269397 NPFFO15130 113 aa20.78■□□□□ 0.92
CBX4-201ENST00000269397 LINC00477Q96M19 166 aa20.78■□□□□ 0.92
CBX4-201ENST00000269397 SRSF9Q13242 221 aaKnown RBP eCLIP20.77■□□□□ 0.92
CBX4-201ENST00000269397 LINC01549A6NIU2 74 aa20.77■□□□□ 0.92
CBX4-201ENST00000269397 IGHV3-11P01762 117 aa20.77■□□□□ 0.92
CBX4-201ENST00000269397 BPESC1Q9GZL8 116 aa20.77■□□□□ 0.92
CBX4-201ENST00000269397 UBTD1Q9HAC8 227 aa20.76■□□□□ 0.91
CBX4-201ENST00000269397 WFDC12Q8WWY7 111 aa20.75■□□□□ 0.91
CBX4-201ENST00000269397 LENEPQ9Y5L5 61 aa20.75■□□□□ 0.91
CBX4-201ENST00000269397 LOC107984156A0A0G2JMH3 177 aa20.74■□□□□ 0.91
CBX4-201ENST00000269397 RNASE3P12724 160 aaKnown RBP20.74■□□□□ 0.91
CBX4-201ENST00000269397 ARL17AQ8IVW1 177 aa20.74■□□□□ 0.91
CBX4-201ENST00000269397 JPT2Q9H910 190 aa20.74■□□□□ 0.91
CBX4-201ENST00000269397 HIVEP3Q5T1R4 2406 aa20.74■□□□□ 0.91
CBX4-201ENST00000269397 SRD5A1P18405 259 aa20.74■□□□□ 0.91
CBX4-201ENST00000269397 APOMO95445 188 aa20.73■□□□□ 0.91
CBX4-201ENST00000269397 CRYGDP07320 174 aa20.73■□□□□ 0.91
CBX4-201ENST00000269397 LINC01619G3V211 115 aa20.73■□□□□ 0.91
CBX4-201ENST00000269397 ZFP2Q6ZN57 461 aa20.73■□□□□ 0.91
CBX4-201ENST00000269397 SPATA25Q9BR10 227 aa20.73■□□□□ 0.91
CBX4-201ENST00000269397 BRD3OSQ6XYD6 125 aa20.72■□□□□ 0.91
CBX4-201ENST00000269397 C11orf86A6NJI1 115 aa20.72■□□□□ 0.91
CBX4-201ENST00000269397 NDUFS8O00217 210 aa20.72■□□□□ 0.91
CBX4-201ENST00000269397 SOCS3O14543 225 aa20.72■□□□□ 0.91
CBX4-201ENST00000269397 LMO4P61968 165 aa20.72■□□□□ 0.91
CBX4-201ENST00000269397 TSHBP01222 138 aa20.71■□□□□ 0.91
CBX4-201ENST00000269397 COX6B1P14854 86 aa20.71■□□□□ 0.91
CBX4-201ENST00000269397 PSMB2P49721 201 aa20.71■□□□□ 0.91
CBX4-201ENST00000269397 OVOL1O14753 267 aa20.71■□□□□ 0.91
CBX4-201ENST00000269397 RPL39P62891 51 aaKnown RBP20.71■□□□□ 0.91
CBX4-201ENST00000269397 TP53TG1Q9Y2A0 90 aa20.71■□□□□ 0.91
CBX4-201ENST00000269397 SMCPP49901 116 aaPredicted RBP20.7■□□□□ 0.9
CBX4-201ENST00000269397 CIDEAO60543 219 aa20.69■□□□□ 0.9
CBX4-201ENST00000269397 TSPAN13O95857 204 aa20.69■□□□□ 0.9
CBX4-201ENST00000269397 ZNF418Q8TF45 676 aaPredicted RBP20.69■□□□□ 0.9
CBX4-201ENST00000269397 A0A087WWL8 130 aa20.68■□□□□ 0.9
CBX4-201ENST00000269397 FAM223BA6NKX1 122 aa20.68■□□□□ 0.9
CBX4-201ENST00000269397 FAM223AQ8IWN6 122 aa20.68■□□□□ 0.9
CBX4-201ENST00000269397 MOB4Q9Y3A3 225 aa20.68■□□□□ 0.9
CBX4-201ENST00000269397 PTH2Q96A98 100 aa20.68■□□□□ 0.9
CBX4-201ENST00000269397 ABCA2Q9BZC7 2435 aa20.67■□□□□ 0.9
CBX4-201ENST00000269397 IGLV4-69A0A075B6H9 119 aa20.67■□□□□ 0.9
CBX4-201ENST00000269397 LY6EQ16553 131 aa20.67■□□□□ 0.9
CBX4-201ENST00000269397 CLEC2AQ6UVW9 174 aa20.67■□□□□ 0.9
CBX4-201ENST00000269397 DLX4Q92988 240 aaPredicted RBP20.67■□□□□ 0.9
CBX4-201ENST00000269397 NBL1P41271 181 aa20.66■□□□□ 0.9
CBX4-201ENST00000269397 C19orf54Q5BKX5 351 aa20.66■□□□□ 0.9
CBX4-201ENST00000269397 CFAP126Q5VTH2 177 aa20.66■□□□□ 0.9
CBX4-201ENST00000269397 TMEM238LA0A1B0GVL6 79 aa20.66■□□□□ 0.9
CBX4-201ENST00000269397 A6NJY4 79 aa20.66■□□□□ 0.9
CBX4-201ENST00000269397 SCGB1A1P11684 91 aa20.66■□□□□ 0.9
CBX4-201ENST00000269397 EDN2P20800 178 aa20.66■□□□□ 0.9
CBX4-201ENST00000269397 UBE2D1P51668 147 aa20.66■□□□□ 0.9
CBX4-201ENST00000269397 TGFAP01135 160 aa20.65■□□□□ 0.9
CBX4-201ENST00000269397 Q6ZS46 218 aa20.65■□□□□ 0.9
CBX4-201ENST00000269397 NFE4Q86UQ8 179 aa20.65■□□□□ 0.9
CBX4-201ENST00000269397 F5H697 171 aa20.64■□□□□ 0.9
CBX4-201ENST00000269397 NDUFA4O00483 81 aa20.64■□□□□ 0.9
CBX4-201ENST00000269397 LINC00315P59091 139 aa20.64■□□□□ 0.9
CBX4-201ENST00000269397 FOXI1Q12951 378 aa20.64■□□□□ 0.9
CBX4-201ENST00000269397 TSPEAR-AS2P59090 65 aa20.64■□□□□ 0.89
CBX4-201ENST00000269397 FAM19A4Q96LR4 140 aa20.64■□□□□ 0.89
CBX4-201ENST00000269397 CD7P09564 240 aa20.63■□□□□ 0.89
CBX4-201ENST00000269397 KIF25-AS1Q9Y6Z4 181 aa20.63■□□□□ 0.89
CBX4-201ENST00000269397 TMEM170BQ5T4T1 132 aa20.63■□□□□ 0.89
CBX4-201ENST00000269397 SYT8Q8NBV8 401 aa20.62■□□□□ 0.89
CBX4-201ENST00000269397 RHPN1-AS1Q9BWJ2 59 aa20.62■□□□□ 0.89
CBX4-201ENST00000269397 C1QTNF4Q9BXJ3 329 aa20.62■□□□□ 0.89
CBX4-201ENST00000269397 A0A0J9YY99 117 aa20.62■□□□□ 0.89
CBX4-201ENST00000269397 IGIPA6NJ69 53 aa20.62■□□□□ 0.89
CBX4-201ENST00000269397 SUMO4Q6EEV6 95 aa20.62■□□□□ 0.89
CBX4-201ENST00000269397 PF4V1P10720 104 aa20.61■□□□□ 0.89
CBX4-201ENST00000269397 CRYBG3Q68DQ2 2970 aa20.61■□□□□ 0.89
CBX4-201ENST00000269397 FAM74A4Q5TZK3 123 aa20.61■□□□□ 0.89
CBX4-201ENST00000269397 ATP6V0BQ99437 205 aa20.6■□□□□ 0.89
CBX4-201ENST00000269397 PMVKQ15126 192 aa20.6■□□□□ 0.89
CBX4-201ENST00000269397 NDUFA11Q86Y39 141 aa20.6■□□□□ 0.89
CBX4-201ENST00000269397 PPP1R17O96001 155 aa20.59■□□□□ 0.89
CBX4-201ENST00000269397 MED14OSP0DP75 135 aa20.59■□□□□ 0.89
CBX4-201ENST00000269397 KLRB1Q12918 225 aa20.59■□□□□ 0.89
CBX4-201ENST00000269397 ZNRF2Q8NHG8 242 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms