RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 F8P00451 2351 aa15.37■□□□□ 0.05
LYSMD2-201ENST00000267838 LYZL1Q6UWQ5 148 aa15.37■□□□□ 0.05
LYSMD2-201ENST00000267838 C11orf21Q9P2W6 132 aa15.37■□□□□ 0.05
LYSMD2-201ENST00000267838 COX11Q9Y6N1 276 aa15.37■□□□□ 0.05
LYSMD2-201ENST00000267838 J3KRW8 73 aa15.36■□□□□ 0.05
LYSMD2-201ENST00000267838 TMEM61Q8N0U2 210 aa15.36■□□□□ 0.05
LYSMD2-201ENST00000267838 U3KQK5 164 aa15.36■□□□□ 0.05
LYSMD2-201ENST00000267838 TRAV2A0A0B4J234 112 aa15.36■□□□□ 0.05
LYSMD2-201ENST00000267838 IGKV3D-20A0A0C4DH25 116 aa15.36■□□□□ 0.05
LYSMD2-201ENST00000267838 IGLC6P0CF74 106 aa15.36■□□□□ 0.05
LYSMD2-201ENST00000267838 DEFB114Q30KQ6 69 aa15.36■□□□□ 0.05
LYSMD2-201ENST00000267838 FER1L6-AS1Q8NA97 138 aa15.36■□□□□ 0.05
LYSMD2-201ENST00000267838 PMCHL2Q9BQD1 86 aa15.36■□□□□ 0.05
LYSMD2-201ENST00000267838 SCRT2Q9NQ03 307 aa15.36■□□□□ 0.05
LYSMD2-201ENST00000267838 A0A0J9YX75 114 aa15.35■□□□□ 0.05
LYSMD2-201ENST00000267838 hDV102S1A0JD36 115 aa15.35■□□□□ 0.05
LYSMD2-201ENST00000267838 ADARB2-AS1A8MUL3 147 aa15.35■□□□□ 0.05
LYSMD2-201ENST00000267838 Q6ZQT7 251 aa15.35■□□□□ 0.05
LYSMD2-201ENST00000267838 APRG1Q8IVJ8 170 aa15.35■□□□□ 0.05
LYSMD2-201ENST00000267838 NSD1Q96L73 2696 aaPredicted RBP15.35■□□□□ 0.05
LYSMD2-201ENST00000267838 FAM104BQ5XKR9 115 aa15.34■□□□□ 0.05
LYSMD2-201ENST00000267838 ZNF747Q9BV97 191 aa15.34■□□□□ 0.05
LYSMD2-201ENST00000267838 TRAV21A0A0B4J279 112 aa15.34■□□□□ 0.05
LYSMD2-201ENST00000267838 C12orf54Q6X4T0 127 aa15.34■□□□□ 0.05
LYSMD2-201ENST00000267838 ORMDL3Q8N138 153 aa15.34■□□□□ 0.05
LYSMD2-201ENST00000267838 RNASE4P34096 147 aaKnown RBP15.33■□□□□ 0.04
LYSMD2-201ENST00000267838 NSUN5P1Q3KNT7 163 aa15.33■□□□□ 0.04
LYSMD2-201ENST00000267838 PRELID3AQ96N28 172 aa15.33■□□□□ 0.04
LYSMD2-201ENST00000267838 FN1P02751 2386 aaKnown RBP15.32■□□□□ 0.04
LYSMD2-201ENST00000267838 KRTAP10-3P60369 221 aa15.32■□□□□ 0.04
LYSMD2-201ENST00000267838 CD300EQ496F6 205 aaPredicted RBP15.32■□□□□ 0.04
LYSMD2-201ENST00000267838 FOXI2Q6ZQN5 318 aa15.32■□□□□ 0.04
LYSMD2-201ENST00000267838 ODF3Q96PU9 254 aa15.32■□□□□ 0.04
LYSMD2-201ENST00000267838 KLLNB2CW77 178 aa15.31■□□□□ 0.04
LYSMD2-201ENST00000267838 D6R8Y8 96 aa15.31■□□□□ 0.04
LYSMD2-201ENST00000267838 KIR3DS1Q14943 382 aa15.31■□□□□ 0.04
LYSMD2-201ENST00000267838 SIGLEC8Q9NYZ4 499 aa15.31■□□□□ 0.04
LYSMD2-201ENST00000267838 DUSP14O95147 198 aaKnown RBP15.31■□□□□ 0.04
LYSMD2-201ENST00000267838 PTTG1IPP53801 180 aa15.31■□□□□ 0.04
LYSMD2-201ENST00000267838 UBE2V1Q13404 147 aa15.31■□□□□ 0.04
LYSMD2-201ENST00000267838 MUC21A0A0G2JKD1 596 aa15.3■□□□□ 0.04
LYSMD2-201ENST00000267838 MUC21A0A140T8X8 626 aa15.3■□□□□ 0.04
LYSMD2-201ENST00000267838 LEPP41159 167 aa15.3■□□□□ 0.04
LYSMD2-201ENST00000267838 MUC21Q5SSG8 566 aa15.3■□□□□ 0.04
LYSMD2-201ENST00000267838 NDUFA11Q86Y39 141 aa15.3■□□□□ 0.04
LYSMD2-201ENST00000267838 TRAV25A0A0B4J276 109 aa15.29■□□□□ 0.04
LYSMD2-201ENST00000267838 DEFB131AP59861 70 aa15.29■□□□□ 0.04
LYSMD2-201ENST00000267838 SPAG8Q99932 426 aaPredicted RBP15.29■□□□□ 0.04
LYSMD2-201ENST00000267838 H0Y8G0 127 aa15.29■□□□□ 0.04
LYSMD2-201ENST00000267838 IGKV3-20P01619 116 aa15.29■□□□□ 0.04
LYSMD2-201ENST00000267838 IFI27P40305 119 aaPredicted RBP15.29■□□□□ 0.04
LYSMD2-201ENST00000267838 MPV17L2Q567V2 206 aa15.29■□□□□ 0.04
LYSMD2-201ENST00000267838 CNFNQ9BYD5 112 aa15.29■□□□□ 0.04
LYSMD2-201ENST00000267838 TIMM8BQ9Y5J9 83 aaPredicted RBP15.29■□□□□ 0.04
LYSMD2-201ENST00000267838 COX8AP10176 69 aa15.28■□□□□ 0.04
LYSMD2-201ENST00000267838 MRPL51Q4U2R6 128 aaKnown RBP15.28■□□□□ 0.04
LYSMD2-201ENST00000267838 BVES-AS1Q5T3Y7 98 aa15.28■□□□□ 0.04
LYSMD2-201ENST00000267838 AMN1Q8IY45 258 aa15.28■□□□□ 0.04
LYSMD2-201ENST00000267838 TWIST1Q15672 202 aa15.27■□□□□ 0.04
LYSMD2-201ENST00000267838 LGALS9BQ3B8N2 356 aa15.27■□□□□ 0.04
LYSMD2-201ENST00000267838 LGALS9CQ6DKI2 356 aa15.27■□□□□ 0.04
LYSMD2-201ENST00000267838 NUDT3O95989 172 aa15.26■□□□□ 0.03
LYSMD2-201ENST00000267838 HBDP02042 147 aa15.26■□□□□ 0.03
LYSMD2-201ENST00000267838 MAP6D1Q9H9H5 199 aa15.26■□□□□ 0.03
LYSMD2-201ENST00000267838 ZNF256Q9Y2P7 627 aaPredicted RBP15.26■□□□□ 0.03
LYSMD2-201ENST00000267838 KNCNA6PVL3 124 aa15.26■□□□□ 0.03
LYSMD2-201ENST00000267838 PPBPP02775 128 aa15.26■□□□□ 0.03
LYSMD2-201ENST00000267838 ANXA2RQ3ZCQ2 193 aa15.26■□□□□ 0.03
LYSMD2-201ENST00000267838 CBY1Q9Y3M2 126 aa15.26■□□□□ 0.03
LYSMD2-201ENST00000267838 A0A096LNJ9 63 aa15.25■□□□□ 0.03
LYSMD2-201ENST00000267838 C7orf71A4D174 169 aa15.25■□□□□ 0.03
LYSMD2-201ENST00000267838 CCL25O15444 150 aa15.25■□□□□ 0.03
LYSMD2-201ENST00000267838 CKS2P33552 79 aa15.25■□□□□ 0.03
LYSMD2-201ENST00000267838 DEFB125Q8N687 156 aa15.25■□□□□ 0.03
LYSMD2-201ENST00000267838 LOC389332A0A1B0GUA5 103 aa15.24■□□□□ 0.03
LYSMD2-201ENST00000267838 HLA-DRB4P13762 266 aa15.24■□□□□ 0.03
LYSMD2-201ENST00000267838 CDKN1BP46527 198 aa15.24■□□□□ 0.03
LYSMD2-201ENST00000267838 AMTNQ6UX39 209 aa15.24■□□□□ 0.03
LYSMD2-201ENST00000267838 HLA-DRB4X5D2U9 266 aa15.24■□□□□ 0.03
LYSMD2-201ENST00000267838 SETD2Q9BYW2 2564 aaPredicted RBP15.24■□□□□ 0.03
LYSMD2-201ENST00000267838 TRAV12-3A0A0B4J271 114 aa15.24■□□□□ 0.03
LYSMD2-201ENST00000267838 SNAI2O43623 268 aa15.24■□□□□ 0.03
LYSMD2-201ENST00000267838 SAP30O75446 220 aa15.24■□□□□ 0.03
LYSMD2-201ENST00000267838 MSRB1Q9NZV6 116 aa15.24■□□□□ 0.03
LYSMD2-201ENST00000267838 H3BVH4 76 aa15.23■□□□□ 0.03
LYSMD2-201ENST00000267838 SPINK13Q1W4C9 94 aa15.23■□□□□ 0.03
LYSMD2-201ENST00000267838 MCRIP2Q9BUT9 160 aaKnown RBP15.23■□□□□ 0.03
LYSMD2-201ENST00000267838 AGRNO00468 2067 aa15.22■□□□□ 0.03
LYSMD2-201ENST00000267838 MAST4O15021 2626 aa15.22■□□□□ 0.03
LYSMD2-201ENST00000267838 TEP1Q99973 2627 aaKnown RBP15.22■□□□□ 0.03
LYSMD2-201ENST00000267838 TRAV12-2A0A075B6T6 113 aa15.22■□□□□ 0.03
LYSMD2-201ENST00000267838 A8MTW9 85 aa15.22■□□□□ 0.03
LYSMD2-201ENST00000267838 H3BMM0 161 aa15.22■□□□□ 0.03
LYSMD2-201ENST00000267838 NCR2O95944 276 aa15.22■□□□□ 0.03
LYSMD2-201ENST00000267838 ASIPP42127 132 aa15.22■□□□□ 0.03
LYSMD2-201ENST00000267838 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.22■□□□□ 0.03
LYSMD2-201ENST00000267838 MAP1LC3AQ9H492 121 aa15.22■□□□□ 0.03
LYSMD2-201ENST00000267838 WNK1Q9H4A3 2382 aa15.22■□□□□ 0.03
LYSMD2-201ENST00000267838 TAX1BP3O14907 124 aa15.21■□□□□ 0.03
LYSMD2-201ENST00000267838 FAM159AQ6UWV7 190 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms