RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 ORMDL3Q8N138 153 aa8.53□□□□□ -1.04
SCAF11-201ENST00000266589 LINC00482Q8N8I6 264 aa8.53□□□□□ -1.04
SCAF11-201ENST00000266589 RNF185Q96GF1 192 aa8.53□□□□□ -1.04
SCAF11-201ENST00000266589 OR11H12B2RN74 326 aa8.53□□□□□ -1.04
SCAF11-201ENST00000266589 CRXO43186 299 aaPredicted RBP8.53□□□□□ -1.04
SCAF11-201ENST00000266589 RAB4AP20338 218 aa8.53□□□□□ -1.04
SCAF11-201ENST00000266589 EVI2AP22794 236 aa8.53□□□□□ -1.04
SCAF11-201ENST00000266589 AMTP48728 403 aa8.53□□□□□ -1.04
SCAF11-201ENST00000266589 SMIM15Q7Z3B0 74 aa8.53□□□□□ -1.04
SCAF11-201ENST00000266589 SCRT2Q9NQ03 307 aa8.53□□□□□ -1.04
SCAF11-201ENST00000266589 U3KQK5 164 aa8.53□□□□□ -1.04
SCAF11-201ENST00000266589 IGHV1OR15-1A0A075B7D0 117 aa8.52□□□□□ -1.05
SCAF11-201ENST00000266589 HSBP1O75506 76 aa8.52□□□□□ -1.05
SCAF11-201ENST00000266589 NIT1Q86X76 327 aa8.52□□□□□ -1.05
SCAF11-201ENST00000266589 OR2K2Q8NGT1 345 aa8.52□□□□□ -1.05
SCAF11-201ENST00000266589 URB1-AS1Q96HZ7 61 aa8.52□□□□□ -1.05
SCAF11-201ENST00000266589 PRELID3AQ96N28 172 aa8.52□□□□□ -1.05
SCAF11-201ENST00000266589 SMKR1H3BMG3 65 aa8.52□□□□□ -1.05
SCAF11-201ENST00000266589 NCR2O95944 276 aa8.52□□□□□ -1.05
SCAF11-201ENST00000266589 RBMY1A1P0DJD3 496 aaKnown RBP8.52□□□□□ -1.05
SCAF11-201ENST00000266589 RBMY1CP0DJD4 496 aa8.52□□□□□ -1.05
SCAF11-201ENST00000266589 CKS2P33552 79 aa8.52□□□□□ -1.05
SCAF11-201ENST00000266589 RBMY1FQ15415 496 aaKnown RBP8.52□□□□□ -1.05
SCAF11-201ENST00000266589 Q8N1Y9 231 aa8.52□□□□□ -1.05
SCAF11-201ENST00000266589 FAM19A2Q8N3H0 131 aa8.52□□□□□ -1.05
SCAF11-201ENST00000266589 STHQ8IWL8 128 aa8.51□□□□□ -1.05
SCAF11-201ENST00000266589 NIPBLQ6KC79 2804 aaeCLIP8.51□□□□□ -1.054e-6■■■■■ 30.6
SCAF11-201ENST00000266589 IGHV3-16A0A0C4DH30 117 aa8.5□□□□□ -1.05
SCAF11-201ENST00000266589 LINC00614P0C842 121 aa8.5□□□□□ -1.05
SCAF11-201ENST00000266589 Q6ZWC4 215 aa8.5□□□□□ -1.05
SCAF11-201ENST00000266589 CHCHD1Q96BP2 118 aaKnown RBP8.5□□□□□ -1.05
SCAF11-201ENST00000266589 CITED1Q99966 193 aa8.5□□□□□ -1.05
SCAF11-201ENST00000266589 NIT2Q9NQR4 276 aa8.5□□□□□ -1.05
SCAF11-201ENST00000266589 NXPH4O95158 308 aa8.5□□□□□ -1.05
SCAF11-201ENST00000266589 NPYP01303 97 aa8.5□□□□□ -1.05
SCAF11-201ENST00000266589 PPBPP02775 128 aa8.5□□□□□ -1.05
SCAF11-201ENST00000266589 CMC4P56277 68 aaPredicted RBP8.5□□□□□ -1.05
SCAF11-201ENST00000266589 JOSD1Q15040 202 aaPredicted RBP8.5□□□□□ -1.05
SCAF11-201ENST00000266589 CDPF1Q6NVV7 123 aa8.5□□□□□ -1.05
SCAF11-201ENST00000266589 CLUHP3Q96NS8 147 aa8.5□□□□□ -1.05
SCAF11-201ENST00000266589 MDFICQ9P1T7 246 aa8.5□□□□□ -1.05
SCAF11-201ENST00000266589 GAS8-AS1O95177 125 aa8.49□□□□□ -1.05
SCAF11-201ENST00000266589 BEAN1Q3B7T3 259 aa8.49□□□□□ -1.05
SCAF11-201ENST00000266589 TRPT1Q86TN4 253 aaKnown RBP8.49□□□□□ -1.05
SCAF11-201ENST00000266589 C9orf85Q96MD7 179 aa8.49□□□□□ -1.05
SCAF11-201ENST00000266589 MUC4Q99102 2169 aa8.49□□□□□ -1.05
SCAF11-201ENST00000266589 TRGV11A0A075B6L2 103 aa8.49□□□□□ -1.05
SCAF11-201ENST00000266589 LOC389332A0A1B0GUA5 103 aa8.49□□□□□ -1.05
SCAF11-201ENST00000266589 CBY3A6NI87 242 aa8.49□□□□□ -1.05
SCAF11-201ENST00000266589 BTF3P20290 206 aaKnown RBP8.49□□□□□ -1.05
SCAF11-201ENST00000266589 PMCHL1Q16048 86 aa8.49□□□□□ -1.05
SCAF11-201ENST00000266589 C14orf178Q8N769 122 aaPredicted RBP8.49□□□□□ -1.05
SCAF11-201ENST00000266589 PRSS3P2Q8NHM4 247 aa8.49□□□□□ -1.05
SCAF11-201ENST00000266589 AP1S3Q96PC3 154 aa8.49□□□□□ -1.05
SCAF11-201ENST00000266589 INSP01308 110 aa8.48□□□□□ -1.05
SCAF11-201ENST00000266589 HTN1P15515 57 aa8.48□□□□□ -1.05
SCAF11-201ENST00000266589 IFI27P40305 119 aaPredicted RBP8.48□□□□□ -1.05
SCAF11-201ENST00000266589 FA2HQ7L5A8 372 aa8.48□□□□□ -1.05
SCAF11-201ENST00000266589 FAM110AQ9BQ89 295 aa8.48□□□□□ -1.05
SCAF11-201ENST00000266589 WFDC10AQ9H1F0 79 aa8.48□□□□□ -1.05
SCAF11-201ENST00000266589 DPH3P1Q9H4G8 78 aa8.48□□□□□ -1.05
SCAF11-201ENST00000266589 TRAV26-2A0A0B4J265 109 aa8.47□□□□□ -1.05
SCAF11-201ENST00000266589 IGHV1-24A0A0C4DH33 117 aa8.47□□□□□ -1.05
SCAF11-201ENST00000266589 TNFRSF6BO95407 300 aa8.47□□□□□ -1.05
SCAF11-201ENST00000266589 GATA1P15976 413 aaPredicted RBP8.47□□□□□ -1.05
SCAF11-201ENST00000266589 SPATA3Q8NHX4 192 aa8.47□□□□□ -1.05
SCAF11-201ENST00000266589 AP5S1Q9NUS5 200 aa8.47□□□□□ -1.05
SCAF11-201ENST00000266589 C19orf73Q9NVV2 129 aa8.47□□□□□ -1.05
SCAF11-201ENST00000266589 LAMTOR2Q9Y2Q5 125 aa8.47□□□□□ -1.05
SCAF11-201ENST00000266589 TENM1Q9UKZ4 2725 aa8.47□□□□□ -1.05
SCAF11-201ENST00000266589 C20orf144Q9BQM9 153 aa8.47□□□□□ -1.05
SCAF11-201ENST00000266589 MAP1LC3AQ9H492 121 aa8.47□□□□□ -1.05
SCAF11-201ENST00000266589 XCL2Q9UBD3 114 aa8.47□□□□□ -1.05
SCAF11-201ENST00000266589 SCGB1D1O95968 90 aa8.46□□□□□ -1.05
SCAF11-201ENST00000266589 MGPP08493 103 aa8.46□□□□□ -1.05
SCAF11-201ENST00000266589 KRTDAPP60985 99 aa8.46□□□□□ -1.05
SCAF11-201ENST00000266589 SYT8Q8NBV8 401 aa8.46□□□□□ -1.05
SCAF11-201ENST00000266589 MRAP2Q96G30 205 aa8.46□□□□□ -1.05
SCAF11-201ENST00000266589 LINC01587Q99440 93 aa8.46□□□□□ -1.05
SCAF11-201ENST00000266589 PRM2P04554 102 aa8.45□□□□□ -1.06
SCAF11-201ENST00000266589 NUTF2P61970 127 aaKnown RBP8.45□□□□□ -1.06
SCAF11-201ENST00000266589 C9orf66Q5T8R8 295 aa8.45□□□□□ -1.06
SCAF11-201ENST00000266589 JPT2Q9H910 190 aa8.45□□□□□ -1.06
SCAF11-201ENST00000266589 SMIM17P0DL12 118 aa8.45□□□□□ -1.06
SCAF11-201ENST00000266589 INSL3P51460 131 aa8.45□□□□□ -1.06
SCAF11-201ENST00000266589 NRACQ8N912 160 aa8.45□□□□□ -1.06
SCAF11-201ENST00000266589 TEP1Q99973 2627 aaKnown RBP8.44□□□□□ -1.06
SCAF11-201ENST00000266589 PCP4L1A6NKN8 68 aa8.44□□□□□ -1.06
SCAF11-201ENST00000266589 KRTAP24-1Q3LI83 254 aa8.44□□□□□ -1.06
SCAF11-201ENST00000266589 LINC00467Q9BRT7 94 aa8.44□□□□□ -1.06
SCAF11-201ENST00000266589 TMEM208Q9BTX3 173 aa8.44□□□□□ -1.06
SCAF11-201ENST00000266589 KIF25-AS1Q9Y6Z4 181 aa8.44□□□□□ -1.06
SCAF11-201ENST00000266589 JMJD1CQ15652 2540 aa8.44□□□□□ -1.06
SCAF11-201ENST00000266589 A0A087WWL8 130 aa8.44□□□□□ -1.06
SCAF11-201ENST00000266589 C3orf79P0CE67 100 aa8.44□□□□□ -1.06
SCAF11-201ENST00000266589 LEPROTL1O95214 131 aa8.43□□□□□ -1.06
SCAF11-201ENST00000266589 RPL35AP18077 110 aaKnown RBP8.43□□□□□ -1.06
SCAF11-201ENST00000266589 ZNF415Q09FC8 603 aa8.43□□□□□ -1.06
SCAF11-201ENST00000266589 ZNF876PQ49A33 203 aa8.43□□□□□ -1.06
SCAF11-201ENST00000266589 C1orf158Q8N1D5 194 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms