RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 C5orf30Q96GV9 206 aa10.74□□□□□ -0.69
CDH1-201ENST00000261769 C20orf144Q9BQM9 153 aa10.74□□□□□ -0.69
CDH1-201ENST00000261769 SMIM2Q9BVW6 85 aa10.74□□□□□ -0.69
CDH1-201ENST00000261769 ZC2HC1BQ5TFG8 222 aa10.74□□□□□ -0.69
CDH1-201ENST00000261769 PMVKQ15126 192 aa10.74□□□□□ -0.69
CDH1-201ENST00000261769 DEFB135Q30KP9 77 aa10.74□□□□□ -0.69
CDH1-201ENST00000261769 NHP2Q9NX24 153 aaKnown RBP10.74□□□□□ -0.69
CDH1-201ENST00000261769 HIST1H2BLQ99880 126 aa10.74□□□□□ -0.69
CDH1-201ENST00000261769 V9GYV3 84 aa10.74□□□□□ -0.69
CDH1-201ENST00000261769 PATE2Q6UY27 113 aa10.73□□□□□ -0.69
CDH1-201ENST00000261769 LEPROTO15243 131 aa10.73□□□□□ -0.69
CDH1-201ENST00000261769 CHAC1Q9BUX1 264 aa10.73□□□□□ -0.69
CDH1-201ENST00000261769 UBE2CO00762 179 aa10.73□□□□□ -0.69
CDH1-201ENST00000261769 EGR2P11161 476 aaPredicted RBP10.72□□□□□ -0.69
CDH1-201ENST00000261769 SYS1-DBNDD2H3BUS1 97 aa10.72□□□□□ -0.69
CDH1-201ENST00000261769 IGLV2-14P01704 120 aa10.72□□□□□ -0.69
CDH1-201ENST00000261769 HILS1P60008 231 aa10.72□□□□□ -0.69
CDH1-201ENST00000261769 C1orf43Q9BWL3 253 aa10.72□□□□□ -0.69
CDH1-201ENST00000261769 ERG28Q9UKR5 140 aa10.72□□□□□ -0.69
CDH1-201ENST00000261769 PCNX3Q9H6A9 2034 aa10.72□□□□□ -0.69
CDH1-201ENST00000261769 IGKV2D-24A0A075B6R9 120 aa10.72□□□□□ -0.69
CDH1-201ENST00000261769 SMIM27A0A1W2PRY6 76 aa10.72□□□□□ -0.69
CDH1-201ENST00000261769 DNAJC30Q96LL9 226 aa10.72□□□□□ -0.69
CDH1-201ENST00000261769 CRLF1O75462 422 aa10.72□□□□□ -0.69
CDH1-201ENST00000261769 HSD52Q0P140 79 aa10.72□□□□□ -0.69
CDH1-201ENST00000261769 LGALS9O00182 355 aa10.71□□□□□ -0.69
CDH1-201ENST00000261769 Q0VG73 95 aa10.71□□□□□ -0.69
CDH1-201ENST00000261769 ATP6V0E2Q8NHE4 81 aa10.71□□□□□ -0.69
CDH1-201ENST00000261769 NUP210LQ5VU65 1888 aa10.71□□□□□ -0.69
CDH1-201ENST00000261769 E7EUB6 86 aa10.71□□□□□ -0.69
CDH1-201ENST00000261769 F8WEM9 126 aa10.71□□□□□ -0.69
CDH1-201ENST00000261769 TYMSP04818 313 aa10.71□□□□□ -0.69
CDH1-201ENST00000261769 GYPEP15421 78 aa10.71□□□□□ -0.69
CDH1-201ENST00000261769 CDSNQ15517 529 aa10.71□□□□□ -0.69
CDH1-201ENST00000261769 ADAMTSL5Q6ZMM2 481 aa10.71□□□□□ -0.69
CDH1-201ENST00000261769 UNQ9165/PRO28630Q6UXU0 137 aa10.71□□□□□ -0.7
CDH1-201ENST00000261769 C9JQL5 133 aa10.7□□□□□ -0.7
CDH1-201ENST00000261769 HIST3H2BBQ8N257 126 aa10.7□□□□□ -0.7
CDH1-201ENST00000261769 NKAPP1Q8N9T2 125 aa10.7□□□□□ -0.7
CDH1-201ENST00000261769 SIGLEC8Q9NYZ4 499 aa10.7□□□□□ -0.7
CDH1-201ENST00000261769 LRP4O75096 1905 aa10.7□□□□□ -0.7
CDH1-201ENST00000261769 TRAV26-2A0A0B4J265 109 aa10.7□□□□□ -0.7
CDH1-201ENST00000261769 C9orf47Q6ZRZ4 202 aa10.7□□□□□ -0.7
CDH1-201ENST00000261769 IGKV1OR2-108A0A075B7D4 117 aa10.7□□□□□ -0.7
CDH1-201ENST00000261769 TRBV12-3P01733 135 aa10.7□□□□□ -0.7
CDH1-201ENST00000261769 H3BMM0 161 aa10.7□□□□□ -0.7
CDH1-201ENST00000261769 UBE2WQ96B02 151 aa10.7□□□□□ -0.7
CDH1-201ENST00000261769 ABCA12Q86UK0 2595 aa10.7□□□□□ -0.7
CDH1-201ENST00000261769 USP9XQ93008 2570 aaPredicted RBP10.69□□□□□ -0.7
CDH1-201ENST00000261769 TLN2Q9Y4G6 2542 aa10.69□□□□□ -0.7
CDH1-201ENST00000261769 VWC2LB2RUY7 222 aa10.69□□□□□ -0.7
CDH1-201ENST00000261769 C18orf32Q8TCD1 76 aa10.69□□□□□ -0.7
CDH1-201ENST00000261769 ORAOV1Q8WV07 137 aa10.69□□□□□ -0.7
CDH1-201ENST00000261769 WDR87Q6ZQQ6 2873 aa10.69□□□□□ -0.7
CDH1-201ENST00000261769 A0A087X0K7 114 aa10.69□□□□□ -0.7
CDH1-201ENST00000261769 LINC01548A6NM66 108 aa10.69□□□□□ -0.7
CDH1-201ENST00000261769 LY6LH3BQJ8 138 aa10.69□□□□□ -0.7
CDH1-201ENST00000261769 K7EMI3 77 aa10.69□□□□□ -0.7
CDH1-201ENST00000261769 C3orf79P0CE67 100 aa10.69□□□□□ -0.7
CDH1-201ENST00000261769 HERVK_113P63121 156 aa10.69□□□□□ -0.7
CDH1-201ENST00000261769 PROP1O75360 226 aa10.69□□□□□ -0.7
CDH1-201ENST00000261769 LURAP1LQ8IV03 231 aa10.69□□□□□ -0.7
CDH1-201ENST00000261769 LRRK2Q5S007 2527 aa10.68□□□□□ -0.7
CDH1-201ENST00000261769 NEGR1Q7Z3B1 354 aa10.68□□□□□ -0.7
CDH1-201ENST00000261769 GATD1Q8NB37 220 aa10.68□□□□□ -0.7
CDH1-201ENST00000261769 A0A0J9YX75 114 aa10.68□□□□□ -0.7
CDH1-201ENST00000261769 A0A1B0GWB2 263 aa10.68□□□□□ -0.7
CDH1-201ENST00000261769 CCDC140Q96MF4 163 aa10.68□□□□□ -0.7
CDH1-201ENST00000261769 PSMG3-AS1Q96PY0 264 aa10.68□□□□□ -0.7
CDH1-201ENST00000261769 Q9HAA7 133 aa10.68□□□□□ -0.7
CDH1-201ENST00000261769 SPCS1Q9Y6A9 102 aa10.68□□□□□ -0.7
CDH1-201ENST00000261769 NPC2P61916 151 aa10.67□□□□□ -0.7
CDH1-201ENST00000261769 MAP6D1Q9H9H5 199 aa10.67□□□□□ -0.7
CDH1-201ENST00000261769 F8W735 103 aaPredicted RBP10.67□□□□□ -0.7
CDH1-201ENST00000261769 K7EQD1 137 aa10.67□□□□□ -0.7
CDH1-201ENST00000261769 ADCYAP1P18509 176 aa10.67□□□□□ -0.7
CDH1-201ENST00000261769 DEFB125Q8N687 156 aa10.67□□□□□ -0.7
CDH1-201ENST00000261769 MRPL36Q9P0J6 103 aaKnown RBP10.67□□□□□ -0.7
CDH1-201ENST00000261769 ARHGAP21Q5T5U3 1957 aa10.67□□□□□ -0.7
CDH1-201ENST00000261769 FAM167A-AS1Q96KT0 104 aa10.67□□□□□ -0.7
CDH1-201ENST00000261769 SPRY2O43597 315 aa10.66□□□□□ -0.7
CDH1-201ENST00000261769 NPYP01303 97 aa10.66□□□□□ -0.7
CDH1-201ENST00000261769 DAZ2Q13117 558 aaKnown RBP10.66□□□□□ -0.7
CDH1-201ENST00000261769 DAZ4Q86SG3 579 aaKnown RBP10.66□□□□□ -0.7
CDH1-201ENST00000261769 LINC01006Q8NI28 216 aa10.66□□□□□ -0.7
CDH1-201ENST00000261769 DAZ3Q9NR90 486 aaKnown RBP10.66□□□□□ -0.7
CDH1-201ENST00000261769 OVOL2Q9BRP0 275 aa10.66□□□□□ -0.7
CDH1-201ENST00000261769 ESDP10768 282 aa10.66□□□□□ -0.7
CDH1-201ENST00000261769 ATXN8Q156A1 80 aa10.66□□□□□ -0.7
CDH1-201ENST00000261769 TSPAN13O95857 204 aa10.66□□□□□ -0.7
CDH1-201ENST00000261769 MORN5Q5VZ52 161 aa10.66□□□□□ -0.7
CDH1-201ENST00000261769 PRSS29PA6NIE9 313 aa10.65□□□□□ -0.7
CDH1-201ENST00000261769 DEFB114Q30KQ6 69 aa10.65□□□□□ -0.7
CDH1-201ENST00000261769 Q8N1Y9 231 aa10.65□□□□□ -0.7
CDH1-201ENST00000261769 ZNF625Q96I27 306 aaPredicted RBP10.65□□□□□ -0.7
CDH1-201ENST00000261769 TM2D2Q9BX73 214 aa10.65□□□□□ -0.7
CDH1-201ENST00000261769 TMEM263Q8WUH6 116 aaKnown RBP10.65□□□□□ -0.7
CDH1-201ENST00000261769 HHLA3Q9XRX5 114 aa10.65□□□□□ -0.7
CDH1-201ENST00000261769 PFN2P35080 140 aa10.65□□□□□ -0.7
CDH1-201ENST00000261769 KRTAP10-9P60411 292 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 207.9 ms