RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 C16orf74Q96GX8 76 aa11.19□□□□□ -0.62
CUX2-201ENST00000261726 DAND5Q8N907 189 aa11.19□□□□□ -0.62
CUX2-201ENST00000261726 K7EMI3 77 aa11.19□□□□□ -0.62
CUX2-201ENST00000261726 MRPL23Q16540 153 aaKnown RBP11.19□□□□□ -0.62
CUX2-201ENST00000261726 IGLL5B9A064 214 aa11.19□□□□□ -0.62
CUX2-201ENST00000261726 SIVA1O15304 175 aa11.18□□□□□ -0.62
CUX2-201ENST00000261726 SPART-AS1P0CW21 52 aa11.18□□□□□ -0.62
CUX2-201ENST00000261726 FHL1Q13642 323 aa11.18□□□□□ -0.62
CUX2-201ENST00000261726 Q6ZVH6 145 aa11.18□□□□□ -0.62
CUX2-201ENST00000261726 IGHV2-5P01817 119 aa11.18□□□□□ -0.62
CUX2-201ENST00000261726 LTBP2Q14767 1821 aa11.18□□□□□ -0.62
CUX2-201ENST00000261726 H3BUA1 57 aa11.18□□□□□ -0.62
CUX2-201ENST00000261726 PSMB8P28062 276 aa11.18□□□□□ -0.62
CUX2-201ENST00000261726 COL6A6A6NMZ7 2263 aa11.17□□□□□ -0.62
CUX2-201ENST00000261726 WISP1O95388 367 aa11.17□□□□□ -0.62
CUX2-201ENST00000261726 MUSTN1Q8IVN3 82 aa11.17□□□□□ -0.62
CUX2-201ENST00000261726 NOTCH4Q99466 2003 aa11.17□□□□□ -0.62
CUX2-201ENST00000261726 ATP5G1P05496 136 aa11.17□□□□□ -0.62
CUX2-201ENST00000261726 DEFB4AO15263 64 aa11.17□□□□□ -0.62
CUX2-201ENST00000261726 FANCD2OSQ96PS1 177 aa11.17□□□□□ -0.62
CUX2-201ENST00000261726 SH2D6Q7Z4S9 175 aa11.16□□□□□ -0.62
CUX2-201ENST00000261726 C11orf52Q96A22 123 aa11.16□□□□□ -0.62
CUX2-201ENST00000261726 OPRPNQ99935 248 aaPredicted RBP11.16□□□□□ -0.62
CUX2-201ENST00000261726 PRSS47A8MTI9 375 aa11.16□□□□□ -0.62
CUX2-201ENST00000261726 GRNP28799 593 aaKnown RBP11.16□□□□□ -0.62
CUX2-201ENST00000261726 PROK2Q9HC23 129 aa11.16□□□□□ -0.62
CUX2-201ENST00000261726 SPTBN2O15020 2390 aa11.16□□□□□ -0.62
CUX2-201ENST00000261726 NCOR1P1Q9H4R4 102 aa11.16□□□□□ -0.62
CUX2-201ENST00000261726 IGHV4-38-2P0DP08 117 aa11.15□□□□□ -0.62
CUX2-201ENST00000261726 ZNF747Q9BV97 191 aa11.15□□□□□ -0.62
CUX2-201ENST00000261726 NCOR1O75376 2440 aa11.15□□□□□ -0.62
CUX2-201ENST00000261726 ETV2O00321 342 aaPredicted RBP11.15□□□□□ -0.62
CUX2-201ENST00000261726 RNF183Q96D59 192 aa11.15□□□□□ -0.62
CUX2-201ENST00000261726 NUP210Q8TEM1 1887 aaPredicted RBP11.15□□□□□ -0.62
CUX2-201ENST00000261726 H0Y9J4 135 aa11.15□□□□□ -0.62
CUX2-201ENST00000261726 PROP1O75360 226 aa11.15□□□□□ -0.62
CUX2-201ENST00000261726 SEC61GP60059 68 aa11.15□□□□□ -0.62
CUX2-201ENST00000261726 RBAKDNA6NC62 111 aa11.15□□□□□ -0.62
CUX2-201ENST00000261726 IGFL3Q6UXB1 125 aa11.15□□□□□ -0.62
CUX2-201ENST00000261726 PRSS33Q8NF86 280 aa11.14□□□□□ -0.63
CUX2-201ENST00000261726 TM2D2Q9BX73 214 aa11.14□□□□□ -0.63
CUX2-201ENST00000261726 A0A0B4J2C4 111 aa11.14□□□□□ -0.63
CUX2-201ENST00000261726 IGLV1-44P01699 117 aa11.14□□□□□ -0.63
CUX2-201ENST00000261726 DAZ2Q13117 558 aaKnown RBP11.14□□□□□ -0.63
CUX2-201ENST00000261726 DAZ4Q86SG3 579 aaKnown RBP11.14□□□□□ -0.63
CUX2-201ENST00000261726 DAZ3Q9NR90 486 aaKnown RBP11.14□□□□□ -0.63
CUX2-201ENST00000261726 ACYP1P07311 99 aa11.13□□□□□ -0.63
CUX2-201ENST00000261726 FAM215AQ9Y5M1 114 aa11.13□□□□□ -0.63
CUX2-201ENST00000261726 A0A0J9YXV3 536 aa11.13□□□□□ -0.63
CUX2-201ENST00000261726 NDUFC2O95298 119 aa11.13□□□□□ -0.63
CUX2-201ENST00000261726 IGHV2-70P01814 119 aa11.13□□□□□ -0.63
CUX2-201ENST00000261726 TMEM61Q8N0U2 210 aa11.13□□□□□ -0.63
CUX2-201ENST00000261726 HEATR5AQ86XA9 2040 aa11.13□□□□□ -0.63
CUX2-201ENST00000261726 OBSL1O75147 1896 aa11.13□□□□□ -0.63
CUX2-201ENST00000261726 LRCOL1A6NCL2 159 aa11.13□□□□□ -0.63
CUX2-201ENST00000261726 AJUBAQ96IF1 538 aa11.13□□□□□ -0.63
CUX2-201ENST00000261726 CTSZQ9UBR2 303 aa11.12□□□□□ -0.63
CUX2-201ENST00000261726 NDUFA1O15239 70 aa11.12□□□□□ -0.63
CUX2-201ENST00000261726 DEFB113Q30KQ7 82 aa11.12□□□□□ -0.63
CUX2-201ENST00000261726 C2orf16Q68DN1 1984 aa11.12□□□□□ -0.63
CUX2-201ENST00000261726 HHLA3Q9XRX5 114 aa11.12□□□□□ -0.63
CUX2-201ENST00000261726 WFDC11Q8NEX6 87 aa11.12□□□□□ -0.63
CUX2-201ENST00000261726 A4D1N5 150 aa11.11□□□□□ -0.63
CUX2-201ENST00000261726 FAM236AA0A1B0GUQ0 79 aa11.11□□□□□ -0.63
CUX2-201ENST00000261726 FAM236BA0A1B0GV22 79 aa11.11□□□□□ -0.63
CUX2-201ENST00000261726 DOCK8Q8NF50 2099 aa11.11□□□□□ -0.63
CUX2-201ENST00000261726 H0YGX0 51 aa11.11□□□□□ -0.63
CUX2-201ENST00000261726 C1orf147Q96MC9 270 aaPredicted RBP11.11□□□□□ -0.63
CUX2-201ENST00000261726 PLXNA2O75051 1894 aa11.11□□□□□ -0.63
CUX2-201ENST00000261726 IGHV4-30-2A0A087WSY4 118 aa11.11□□□□□ -0.63
CUX2-201ENST00000261726 CENPVL3A0A0U1RRI6 287 aa11.11□□□□□ -0.63
CUX2-201ENST00000261726 RPL39P62891 51 aaKnown RBP11.11□□□□□ -0.63
CUX2-201ENST00000261726 BLCAPP62952 87 aa11.11□□□□□ -0.63
CUX2-201ENST00000261726 PRR20EP86478 221 aa11.11□□□□□ -0.63
CUX2-201ENST00000261726 PRR20CP86479 221 aa11.11□□□□□ -0.63
CUX2-201ENST00000261726 PRR20DP86480 221 aa11.11□□□□□ -0.63
CUX2-201ENST00000261726 PRR20BP86481 221 aa11.11□□□□□ -0.63
CUX2-201ENST00000261726 PRR20AP86496 221 aa11.11□□□□□ -0.63
CUX2-201ENST00000261726 SPRNQ5BIV9 151 aa11.1□□□□□ -0.63
CUX2-201ENST00000261726 RITA1Q96K30 269 aa11.1□□□□□ -0.63
CUX2-201ENST00000261726 DENND4CQ5VZ89 1909 aa11.1□□□□□ -0.63
CUX2-201ENST00000261726 IGHV4-61A0A0C4DH41 118 aa11.1□□□□□ -0.63
CUX2-201ENST00000261726 IGHV4OR15-8A0A075B7B6 117 aa11.1□□□□□ -0.63
CUX2-201ENST00000261726 A0A087WW49 117 aa11.1□□□□□ -0.63
CUX2-201ENST00000261726 HIGD2BQ4VC39 106 aa11.1□□□□□ -0.63
CUX2-201ENST00000261726 MSRB1Q9NZV6 116 aa11.1□□□□□ -0.63
CUX2-201ENST00000261726 DEFB135Q30KP9 77 aa11.1□□□□□ -0.63
CUX2-201ENST00000261726 USF3Q68DE3 2245 aa11.09□□□□□ -0.63
CUX2-201ENST00000261726 IGKV4-1P06312 121 aa11.09□□□□□ -0.63
CUX2-201ENST00000261726 NRGNQ92686 78 aa11.09□□□□□ -0.63
CUX2-201ENST00000261726 DYSFO75923 2080 aa11.09□□□□□ -0.63
CUX2-201ENST00000261726 LY6G6EA0A0G2JKS1 128 aa11.09□□□□□ -0.63
CUX2-201ENST00000261726 U3KQA8 63 aa11.09□□□□□ -0.63
CUX2-201ENST00000261726 LECT2O14960 151 aa11.09□□□□□ -0.63
CUX2-201ENST00000261726 RNF138Q8WVD3 245 aa11.09□□□□□ -0.63
CUX2-201ENST00000261726 LINC00173Q6ZV60 143 aa11.08□□□□□ -0.64
CUX2-201ENST00000261726 CLEC2BQ92478 149 aa11.08□□□□□ -0.64
CUX2-201ENST00000261726 KAAG1Q9UBP8 84 aa11.08□□□□□ -0.64
CUX2-201ENST00000261726 KLK12Q9UKR0 248 aa11.08□□□□□ -0.64
CUX2-201ENST00000261726 CACNA1BQ00975 2339 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms