RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 IFI27P40305 119 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 KIAA1644Q3SXP7 199 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 PHLDA1Q8WV24 401 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 MBD3L1Q8WWY6 194 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 RPP21Q9H633 154 aaKnown RBP4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 HILPDAQ9Y5L2 63 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 INAFM1C9JVW0 142 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 TGFAP01135 160 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 RPL15P61313 204 aaKnown RBP4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 SLC25A39Q9BZJ4 359 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 TNFRSF6BO95407 300 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 PYYP10082 97 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 MALP21145 153 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 ATP5G3P48201 142 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 MEIG1Q5JSS6 88 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 CITED1Q99966 193 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 IGHV3-21A0A0B4J1V1 117 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 MSMBP08118 114 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 ELANEP08246 267 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 RASL10AQ92737 203 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 MRPL53Q96EL3 112 aaKnown RBP4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 LINC01587Q99440 93 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 CHAC1Q9BUX1 264 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 GFRA4Q9GZZ7 299 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 OSTCQ9NRP0 149 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 UQCR10Q9UDW1 63 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 TGIF2-C20orf24A0A0A6YYL0 155 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 C7orf71A4D174 169 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 C19orf71A6NCJ1 209 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 K7EMI3 77 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 PEX7O00628 323 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 CDK2AP2O75956 126 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 TMEM136Q6ZRR5 245 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 TMEM256Q8N2U0 113 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 K7ERU9 68 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 C5orf64Q2M2E5 130 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 PYGO2Q9BRQ0 406 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 SPXQ9BT56 116 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 IL36BQ9NZH7 164 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 KIF25-AS1Q9Y6Z4 181 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 TRAV8-1A0A0A6YYK1 113 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 A0A1B0GUT8 65 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 FAM231BA6NCW3 169 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 OR11H12B2RN74 326 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 IL4P05112 153 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 LINC01545Q5VT33 79 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 MIR17HGQ75NE6 70 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 TMEM75Q8N9X5 138 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 OR11H1Q8NG94 326 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 OR11H2Q8NH07 326 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 FAM110DQ8TAY7 271 aaPredicted RBP4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 F8WEM9 126 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 BUB3O43684 328 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 TOMM40O96008 361 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 IGHV3-23P01764 117 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 TRGC2P03986 189 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 Q5PR19 223 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 COL5A1-AS1Q5SY13 56 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 TSKUQ8WUA8 353 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 ZMAT4Q9H898 229 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 NIT2Q9NQR4 276 aa4.12□□□□□ -1.75
TOPBP1-201ENST00000260810 TRAV1-1A0A0B4J248 108 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 LEPROTL1O95214 131 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 SRP19P09132 144 aaKnown RBP4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 RPL36AP83881 106 aaKnown RBP4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 AWAT1Q58HT5 328 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 OR10J3Q5JRS4 329 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 LINC00305Q7Z4B0 112 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 FER1L6-AS1Q8NA97 138 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 RPL36ALQ969Q0 106 aaKnown RBP4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 DNAJC30Q96LL9 226 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 SRD5A3Q9H8P0 318 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 IGHV7-4-1A0A0J9YVY3 117 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 HOXA3O43365 443 aaPredicted RBP4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 NBEAP1P0C6P0 100 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 GZMBP10144 247 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 ORMDL3Q8N138 153 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 TMEM242Q9NWH2 141 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 DNAJC9-AS1A6NH13 148 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 C9JCJ5 164 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 TCF21O43680 179 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 SLC25A34Q6PIV7 304 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 ZNF562Q6V9R5 426 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 RNF125Q96EQ8 232 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 CYSLTR1Q9Y271 337 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 KLF12Q9Y4X4 402 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 F11RQ9Y624 299 aaKnown RBP4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 TRGV2A0A075B6R0 118 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 CAMPP49913 170 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 FOXL1Q12952 345 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 PRSS57Q6UWY2 283 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 Q6ZSN1 163 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 ZNF329Q86UD4 541 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 WFDC3Q8IUB2 231 aa4.11□□□□□ -1.75
TOPBP1-201ENST00000260810 TMEM262E9PQX1 116 aa4.1□□□□□ -1.75
TOPBP1-201ENST00000260810 LINC01619G3V211 115 aa4.1□□□□□ -1.75
TOPBP1-201ENST00000260810 DNLZQ5SXM8 178 aa4.1□□□□□ -1.75
TOPBP1-201ENST00000260810 VPS25Q9BRG1 176 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms