RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 Q9H3A6 140 aa12.28□□□□□ -0.44
SDCBP-201ENST00000260130 HLA-DRB4X5D2U9 266 aa12.28□□□□□ -0.44
SDCBP-201ENST00000260130 SPRY2O43597 315 aa12.28□□□□□ -0.44
SDCBP-201ENST00000260130 TCRAP04437 139 aa12.28□□□□□ -0.44
SDCBP-201ENST00000260130 MORN3Q6PF18 240 aaPredicted RBP12.28□□□□□ -0.44
SDCBP-201ENST00000260130 RNF183Q96D59 192 aa12.28□□□□□ -0.44
SDCBP-201ENST00000260130 C19orf71A6NCJ1 209 aa12.27□□□□□ -0.45
SDCBP-201ENST00000260130 OR2D3Q8NGH3 330 aa12.27□□□□□ -0.45
SDCBP-201ENST00000260130 SGK494Q96LW2 274 aa12.27□□□□□ -0.45
SDCBP-201ENST00000260130 FAM231BA6NCW3 169 aa12.26□□□□□ -0.45
SDCBP-201ENST00000260130 EBLN2Q6P2I7 272 aa12.26□□□□□ -0.45
SDCBP-201ENST00000260130 RNF182Q8N6D2 247 aa12.26□□□□□ -0.45
SDCBP-201ENST00000260130 OTORQ9NRC9 128 aa12.26□□□□□ -0.45
SDCBP-201ENST00000260130 TMEM14CQ9P0S9 112 aa12.26□□□□□ -0.45
SDCBP-201ENST00000260130 TRAV9-2A0A087WT02 112 aa12.26□□□□□ -0.45
SDCBP-201ENST00000260130 LINC00614P0C842 121 aa12.26□□□□□ -0.45
SDCBP-201ENST00000260130 SLC50A1Q9BRV3 221 aa12.26□□□□□ -0.45
SDCBP-201ENST00000260130 LAMTOR2Q9Y2Q5 125 aa12.26□□□□□ -0.45
SDCBP-201ENST00000260130 F6UB75 175 aa12.25□□□□□ -0.45
SDCBP-201ENST00000260130 H3BTX0 84 aa12.25□□□□□ -0.45
SDCBP-201ENST00000260130 A0A0J9YX75 114 aa12.25□□□□□ -0.45
SDCBP-201ENST00000260130 GIG44P09565 113 aaPredicted RBP12.25□□□□□ -0.45
SDCBP-201ENST00000260130 CHCHD1Q96BP2 118 aaKnown RBP12.25□□□□□ -0.45
SDCBP-201ENST00000260130 ZFP30Q9Y2G7 519 aa12.25□□□□□ -0.45
SDCBP-201ENST00000260130 MRPS16Q9Y3D3 137 aaKnown RBP12.25□□□□□ -0.45
SDCBP-201ENST00000260130 HLA-DMBP28068 263 aa12.24□□□□□ -0.45
SDCBP-201ENST00000260130 PSG3Q16557 428 aa12.24□□□□□ -0.45
SDCBP-201ENST00000260130 ATOH7Q8N100 152 aa12.24□□□□□ -0.45
SDCBP-201ENST00000260130 GTSF1Q8WW33 167 aa12.24□□□□□ -0.45
SDCBP-201ENST00000260130 PGLYRP4Q96LB8 373 aa12.24□□□□□ -0.45
SDCBP-201ENST00000260130 CLUHP3Q96NS8 147 aa12.24□□□□□ -0.45
SDCBP-201ENST00000260130 EDA2RQ9HAV5 297 aa12.24□□□□□ -0.45
SDCBP-201ENST00000260130 AGRNO00468 2067 aa12.24□□□□□ -0.45
SDCBP-201ENST00000260130 IGKV3-20P01619 116 aa12.23□□□□□ -0.45
SDCBP-201ENST00000260130 Q86TA4 180 aa12.23□□□□□ -0.45
SDCBP-201ENST00000260130 ZNF738Q8NE65 137 aa12.23□□□□□ -0.45
SDCBP-201ENST00000260130 TMEM70Q9BUB7 260 aa12.23□□□□□ -0.45
SDCBP-201ENST00000260130 NPIPB6E9PJ23 425 aa12.23□□□□□ -0.45
SDCBP-201ENST00000260130 NPSP0C0P6 89 aa12.23□□□□□ -0.45
SDCBP-201ENST00000260130 TSPOP30536 169 aa12.23□□□□□ -0.45
SDCBP-201ENST00000260130 TRBV6-1A0A0K0K1D8 114 aa12.22□□□□□ -0.45
SDCBP-201ENST00000260130 CLEC5AQ9NY25 188 aa12.22□□□□□ -0.45
SDCBP-201ENST00000260130 TRBV19A0A075B6N1 114 aa12.22□□□□□ -0.45
SDCBP-201ENST00000260130 DMRTA1Q5VZB9 504 aa12.22□□□□□ -0.45
SDCBP-201ENST00000260130 URB1-AS1Q96HZ7 61 aa12.22□□□□□ -0.45
SDCBP-201ENST00000260130 NDFIP1Q9BT67 221 aa12.22□□□□□ -0.45
SDCBP-201ENST00000260130 C1QTNF4Q9BXJ3 329 aa12.22□□□□□ -0.45
SDCBP-201ENST00000260130 DUSP14O95147 198 aaKnown RBP12.21□□□□□ -0.45
SDCBP-201ENST00000260130 CRXO43186 299 aaPredicted RBP12.2□□□□□ -0.46
SDCBP-201ENST00000260130 PSG9Q00887 426 aa12.2□□□□□ -0.46
SDCBP-201ENST00000260130 PDE6HQ13956 83 aa12.2□□□□□ -0.46
SDCBP-201ENST00000260130 MAJINQ3KP22 176 aa12.2□□□□□ -0.46
SDCBP-201ENST00000260130 STPG4Q8N801 248 aa12.2□□□□□ -0.46
SDCBP-201ENST00000260130 OR11H2Q8NH07 326 aa12.2□□□□□ -0.46
SDCBP-201ENST00000260130 XCL2Q9UBD3 114 aa12.2□□□□□ -0.46
SDCBP-201ENST00000260130 DNAH7Q8WXX0 4024 aa12.2□□□□□ -0.46
SDCBP-201ENST00000260130 FOXA3P55318 350 aaPredicted RBP12.2□□□□□ -0.46
SDCBP-201ENST00000260130 CSNK1G2-AS1Q8NCQ2 148 aa12.2□□□□□ -0.46
SDCBP-201ENST00000260130 OR8A1Q8NGG7 326 aa12.2□□□□□ -0.46
SDCBP-201ENST00000260130 A8MTW9 85 aa12.19□□□□□ -0.46
SDCBP-201ENST00000260130 OR5AL1P0C617 328 aa12.19□□□□□ -0.46
SDCBP-201ENST00000260130 GOLT1AQ6ZVE7 132 aa12.19□□□□□ -0.46
SDCBP-201ENST00000260130 PRNTQ86SH4 94 aa12.19□□□□□ -0.46
SDCBP-201ENST00000260130 IGHV1-24A0A0C4DH33 117 aa12.19□□□□□ -0.46
SDCBP-201ENST00000260130 K7EQM0 130 aa12.19□□□□□ -0.46
SDCBP-201ENST00000260130 LEPROTL1O95214 131 aa12.19□□□□□ -0.46
SDCBP-201ENST00000260130 FXYD7P58549 80 aa12.19□□□□□ -0.46
SDCBP-201ENST00000260130 PPP1R14DQ9NXH3 145 aa12.19□□□□□ -0.46
SDCBP-201ENST00000260130 IGLV2-11P01706 119 aa12.18□□□□□ -0.46
SDCBP-201ENST00000260130 HIST1H1AQ02539 215 aaPredicted RBP12.18□□□□□ -0.46
SDCBP-201ENST00000260130 AMTNQ6UX39 209 aa12.18□□□□□ -0.46
SDCBP-201ENST00000260130 LYPD1Q8N2G4 141 aa12.18□□□□□ -0.46
SDCBP-201ENST00000260130 EXOC3-AS1Q8N2X6 119 aa12.18□□□□□ -0.46
SDCBP-201ENST00000260130 TMEM75Q8N9X5 138 aa12.18□□□□□ -0.46
SDCBP-201ENST00000260130 TRAV8-1A0A0A6YYK1 113 aa12.18□□□□□ -0.46
SDCBP-201ENST00000260130 SYS1-DBNDD2H3BUS1 97 aa12.18□□□□□ -0.46
SDCBP-201ENST00000260130 PRB4P10163 310 aaPredicted RBP12.18□□□□□ -0.46
SDCBP-201ENST00000260130 ST20Q9HBF5 79 aa12.18□□□□□ -0.46
SDCBP-201ENST00000260130 MUC7Q8TAX7 377 aa12.17□□□□□ -0.46
SDCBP-201ENST00000260130 ORAOV1Q8WV07 137 aa12.17□□□□□ -0.46
SDCBP-201ENST00000260130 A0A0J9YWU9 116 aa12.16□□□□□ -0.46
SDCBP-201ENST00000260130 A0A1B0GUT8 65 aa12.16□□□□□ -0.46
SDCBP-201ENST00000260130 PRAC2D3DTV9 90 aa12.16□□□□□ -0.46
SDCBP-201ENST00000260130 HINT1P49773 126 aaPredicted RBP12.16□□□□□ -0.46
SDCBP-201ENST00000260130 RIGQ13278 110 aa12.16□□□□□ -0.46
SDCBP-201ENST00000260130 TMEM191AQ9H0A3 160 aa12.16□□□□□ -0.46
SDCBP-201ENST00000260130 AAMDCQ9H7C9 122 aa12.16□□□□□ -0.46
SDCBP-201ENST00000260130 A0A1B0GW15 77 aa12.16□□□□□ -0.46
SDCBP-201ENST00000260130 SPATA12Q7Z6I5 190 aa12.16□□□□□ -0.46
SDCBP-201ENST00000260130 OR10J6PQ8NGY7 276 aa12.16□□□□□ -0.46
SDCBP-201ENST00000260130 MRPL53Q96EL3 112 aaKnown RBP12.16□□□□□ -0.46
SDCBP-201ENST00000260130 M0R3E3 92 aa12.15□□□□□ -0.46
SDCBP-201ENST00000260130 MAP1LC3CQ9BXW4 147 aa12.15□□□□□ -0.46
SDCBP-201ENST00000260130 HSBP1L1C9JCN9 74 aa12.15□□□□□ -0.47
SDCBP-201ENST00000260130 Q6AWC8 147 aa12.15□□□□□ -0.47
SDCBP-201ENST00000260130 PET117Q6UWS5 81 aa12.15□□□□□ -0.47
SDCBP-201ENST00000260130 ZC2HC1AQ96GY0 325 aa12.15□□□□□ -0.47
SDCBP-201ENST00000260130 HSPB8Q9UJY1 196 aa12.15□□□□□ -0.47
SDCBP-201ENST00000260130 C3orf84H3BNL1 204 aa12.14□□□□□ -0.47
SDCBP-201ENST00000260130 GATD1Q8NB37 220 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms