RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 NUTF2P61970 127 aaKnown RBP13.56□□□□□ -0.24
SNX17-201ENST00000233575 TWIST1Q15672 202 aa13.56□□□□□ -0.24
SNX17-201ENST00000233575 MUC4Q99102 2169 aa13.56□□□□□ -0.24
SNX17-201ENST00000233575 IGHV3-16A0A0C4DH30 117 aa13.56□□□□□ -0.24
SNX17-201ENST00000233575 HLA-DQA1P01909 254 aa13.56□□□□□ -0.24
SNX17-201ENST00000233575 C1orf158Q8N1D5 194 aa13.56□□□□□ -0.24
SNX17-201ENST00000233575 MT-ND6P03923 174 aa13.55□□□□□ -0.24
SNX17-201ENST00000233575 COX19Q49B96 90 aa13.55□□□□□ -0.24
SNX17-201ENST00000233575 DNLZQ5SXM8 178 aa13.55□□□□□ -0.24
SNX17-201ENST00000233575 SCRT2Q9NQ03 307 aa13.55□□□□□ -0.24
SNX17-201ENST00000233575 LINC00587B1AMM8 73 aa13.54□□□□□ -0.24
SNX17-201ENST00000233575 S100A6P06703 90 aa13.54□□□□□ -0.24
SNX17-201ENST00000233575 KRTAP10-11P60412 298 aa13.54□□□□□ -0.24
SNX17-201ENST00000233575 LINC01587Q99440 93 aa13.54□□□□□ -0.24
SNX17-201ENST00000233575 IGHV3OR16-12A0A075B7B8 117 aa13.54□□□□□ -0.24
SNX17-201ENST00000233575 CBY3A6NI87 242 aa13.54□□□□□ -0.24
SNX17-201ENST00000233575 APCSP02743 223 aa13.54□□□□□ -0.24
SNX17-201ENST00000233575 SMIM6P0DI80 62 aa13.54□□□□□ -0.24
SNX17-201ENST00000233575 M0R381 172 aa13.53□□□□□ -0.24
SNX17-201ENST00000233575 AMBPP02760 352 aa13.53□□□□□ -0.24
SNX17-201ENST00000233575 SPANXN1Q5VSR9 72 aa13.53□□□□□ -0.24
SNX17-201ENST00000233575 S100A8P05109 93 aa13.52□□□□□ -0.24
SNX17-201ENST00000233575 SNRPEP62304 92 aaKnown RBP13.52□□□□□ -0.24
SNX17-201ENST00000233575 GATD1Q8NB37 220 aa13.52□□□□□ -0.24
SNX17-201ENST00000233575 PHLDA3Q9Y5J5 127 aa13.52□□□□□ -0.24
SNX17-201ENST00000233575 A0A1B0GW15 77 aa13.52□□□□□ -0.25
SNX17-201ENST00000233575 C20orf144Q9BQM9 153 aa13.52□□□□□ -0.25
SNX17-201ENST00000233575 G3V4G9 280 aa13.51□□□□□ -0.25
SNX17-201ENST00000233575 MED14OSP0DP75 135 aa13.51□□□□□ -0.25
SNX17-201ENST00000233575 DMRTA1Q5VZB9 504 aa13.51□□□□□ -0.25
SNX17-201ENST00000233575 ZNF493Q6ZR52 646 aa13.51□□□□□ -0.25
SNX17-201ENST00000233575 C9orf85Q96MD7 179 aa13.51□□□□□ -0.25
SNX17-201ENST00000233575 TMEM208Q9BTX3 173 aa13.51□□□□□ -0.25
SNX17-201ENST00000233575 DNAH3Q8TD57 4116 aa13.51□□□□□ -0.25
SNX17-201ENST00000233575 IGHV4-4A0A075B6R2 117 aa13.51□□□□□ -0.25
SNX17-201ENST00000233575 NDUFA6P56556 154 aa13.51□□□□□ -0.25
SNX17-201ENST00000233575 AMN1Q8IY45 258 aa13.51□□□□□ -0.25
SNX17-201ENST00000233575 CSNK1G2-AS1Q8NCQ2 148 aa13.51□□□□□ -0.25
SNX17-201ENST00000233575 C5orf52A6NGY3 159 aa13.5□□□□□ -0.25
SNX17-201ENST00000233575 AZU1P20160 251 aa13.5□□□□□ -0.25
SNX17-201ENST00000233575 EVI2AP22794 236 aa13.5□□□□□ -0.25
SNX17-201ENST00000233575 EGFEM1PQ0D2K5 195 aa13.5□□□□□ -0.25
SNX17-201ENST00000233575 MORN3Q6PF18 240 aaPredicted RBP13.5□□□□□ -0.25
SNX17-201ENST00000233575 GSN-AS1Q9NRJ2 163 aa13.5□□□□□ -0.25
SNX17-201ENST00000233575 TRGV11A0A075B6L2 103 aa13.49□□□□□ -0.25
SNX17-201ENST00000233575 CACNG7P62955 275 aa13.49□□□□□ -0.25
SNX17-201ENST00000233575 CSTL1Q9H114 145 aa13.49□□□□□ -0.25
SNX17-201ENST00000233575 SRIP30626 198 aa13.49□□□□□ -0.25
SNX17-201ENST00000233575 LOC102724200A0A096LPH7 203 aaPredicted RBP13.48□□□□□ -0.25
SNX17-201ENST00000233575 LINC00467Q9BRT7 94 aa13.48□□□□□ -0.25
SNX17-201ENST00000233575 TMEM191AQ9H0A3 160 aa13.48□□□□□ -0.25
SNX17-201ENST00000233575 FAM104BQ5XKR9 115 aa13.47□□□□□ -0.25
SNX17-201ENST00000233575 C11orf72Q8NBR9 251 aa13.47□□□□□ -0.25
SNX17-201ENST00000233575 C1QTNF4Q9BXJ3 329 aa13.47□□□□□ -0.25
SNX17-201ENST00000233575 NXPH4O95158 308 aa13.47□□□□□ -0.25
SNX17-201ENST00000233575 TMEM256Q8N2U0 113 aa13.47□□□□□ -0.25
SNX17-201ENST00000233575 RNF185Q96GF1 192 aa13.47□□□□□ -0.25
SNX17-201ENST00000233575 JPT2Q9H910 190 aa13.47□□□□□ -0.25
SNX17-201ENST00000233575 IGHV4-30-4P0DP06 118 aa13.46□□□□□ -0.25
SNX17-201ENST00000233575 MRPL51Q4U2R6 128 aaKnown RBP13.46□□□□□ -0.26
SNX17-201ENST00000233575 ALKBH7Q9BT30 221 aaPredicted RBP13.46□□□□□ -0.26
SNX17-201ENST00000233575 GOLT1BQ9Y3E0 138 aa13.46□□□□□ -0.26
SNX17-201ENST00000233575 ZNF705AQ6ZN79 300 aaPredicted RBP13.45□□□□□ -0.26
SNX17-201ENST00000233575 C14orf178Q8N769 122 aaPredicted RBP13.45□□□□□ -0.26
SNX17-201ENST00000233575 GAS8-AS1O95177 125 aa13.44□□□□□ -0.26
SNX17-201ENST00000233575 RAB4AP20338 218 aa13.44□□□□□ -0.26
SNX17-201ENST00000233575 SAMD5Q5TGI4 173 aa13.44□□□□□ -0.26
SNX17-201ENST00000233575 NBEAL2Q6ZNJ1 2754 aa13.44□□□□□ -0.26
SNX17-201ENST00000233575 SMKR1H3BMG3 65 aa13.44□□□□□ -0.26
SNX17-201ENST00000233575 UBE2CO00762 179 aa13.44□□□□□ -0.26
SNX17-201ENST00000233575 ZNF415Q09FC8 603 aa13.44□□□□□ -0.26
SNX17-201ENST00000233575 HOXA5P20719 270 aa13.43□□□□□ -0.26
SNX17-201ENST00000233575 IQCJQ1A5X6 159 aa13.43□□□□□ -0.26
SNX17-201ENST00000233575 ZNF876PQ49A33 203 aa13.43□□□□□ -0.26
SNX17-201ENST00000233575 RNASE8Q8TDE3 154 aaKnown RBP13.43□□□□□ -0.26
SNX17-201ENST00000233575 RCHY1Q96PM5 261 aa13.43□□□□□ -0.26
SNX17-201ENST00000233575 NOTCH1P46531 2555 aa13.42□□□□□ -0.26
SNX17-201ENST00000233575 D6R8Y8 96 aa13.42□□□□□ -0.26
SNX17-201ENST00000233575 NCR2O95944 276 aa13.42□□□□□ -0.26
SNX17-201ENST00000233575 C18orf32Q8TCD1 76 aa13.42□□□□□ -0.26
SNX17-201ENST00000233575 A0A087WWL8 130 aa13.41□□□□□ -0.26
SNX17-201ENST00000233575 TRAV26-2A0A0B4J265 109 aa13.41□□□□□ -0.26
SNX17-201ENST00000233575 COA6Q5JTJ3 125 aaKnown RBP13.41□□□□□ -0.26
SNX17-201ENST00000233575 SMIM15Q7Z3B0 74 aa13.41□□□□□ -0.26
SNX17-201ENST00000233575 AP1S3Q96PC3 154 aa13.41□□□□□ -0.26
SNX17-201ENST00000233575 SAMD10Q9BYL1 202 aa13.41□□□□□ -0.26
SNX17-201ENST00000233575 NIT2Q9NQR4 276 aa13.41□□□□□ -0.26
SNX17-201ENST00000233575 KIF25-AS1Q9Y6Z4 181 aa13.41□□□□□ -0.26
SNX17-201ENST00000233575 NUPR1O60356 82 aa13.4□□□□□ -0.26
SNX17-201ENST00000233575 LINC00310P59036 64 aa13.4□□□□□ -0.26
SNX17-201ENST00000233575 PDZD11Q5EBL8 140 aa13.4□□□□□ -0.26
SNX17-201ENST00000233575 TMEM263Q8WUH6 116 aaKnown RBP13.4□□□□□ -0.26
SNX17-201ENST00000233575 KIR2DL5BA0A0G2JN68 375 aa13.4□□□□□ -0.26
SNX17-201ENST00000233575 KIR2DL5BA0A0G2JPC4 375 aa13.4□□□□□ -0.26
SNX17-201ENST00000233575 GATA1P15976 413 aaPredicted RBP13.4□□□□□ -0.26
SNX17-201ENST00000233575 DEFB135Q30KP9 77 aa13.4□□□□□ -0.26
SNX17-201ENST00000233575 KIR2DL5AQ8N109 375 aa13.4□□□□□ -0.26
SNX17-201ENST00000233575 SYT8Q8NBV8 401 aa13.4□□□□□ -0.26
SNX17-201ENST00000233575 KIR2DL5BQ8NHK3 375 aa13.4□□□□□ -0.26
SNX17-201ENST00000233575 IL17DQ8TAD2 202 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms