RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 SUMO1P63165 101 aaKnown RBP9.67□□□□□ -0.86
VEGFA-201ENST00000230480 GOLT1AQ6ZVE7 132 aa9.67□□□□□ -0.86
VEGFA-201ENST00000230480 TMEM263Q8WUH6 116 aaKnown RBP9.67□□□□□ -0.86
VEGFA-201ENST00000230480 ANAPC16Q96DE5 110 aa9.67□□□□□ -0.86
VEGFA-201ENST00000230480 IMMP2LQ96T52 175 aa9.67□□□□□ -0.86
VEGFA-201ENST00000230480 KLK5Q9Y337 293 aaPredicted RBP9.67□□□□□ -0.86
VEGFA-201ENST00000230480 XKRY2A2RUG3 117 aa9.66□□□□□ -0.86
VEGFA-201ENST00000230480 LYRM9A8MSI8 78 aa9.66□□□□□ -0.86
VEGFA-201ENST00000230480 EREGO14944 169 aa9.66□□□□□ -0.86
VEGFA-201ENST00000230480 TCRAP04437 139 aa9.66□□□□□ -0.86
VEGFA-201ENST00000230480 ZNF80P51504 273 aaPredicted RBP9.66□□□□□ -0.86
VEGFA-201ENST00000230480 CEBPGP53567 150 aa9.66□□□□□ -0.86
VEGFA-201ENST00000230480 TMEM78Q5T7P6 136 aa9.66□□□□□ -0.86
VEGFA-201ENST00000230480 Q6AWC8 147 aa9.66□□□□□ -0.86
VEGFA-201ENST00000230480 ZNF493Q6ZR52 646 aa9.66□□□□□ -0.86
VEGFA-201ENST00000230480 LINC00479Q96M42 142 aa9.66□□□□□ -0.86
VEGFA-201ENST00000230480 NOP10Q9NPE3 64 aaKnown RBP9.66□□□□□ -0.86
VEGFA-201ENST00000230480 C11orf21Q9P2W6 132 aa9.66□□□□□ -0.86
VEGFA-201ENST00000230480 A0A1W2PRE2 83 aa9.65□□□□□ -0.86
VEGFA-201ENST00000230480 GPX1P07203 203 aa9.65□□□□□ -0.86
VEGFA-201ENST00000230480 ANXA2RQ3ZCQ2 193 aa9.65□□□□□ -0.86
VEGFA-201ENST00000230480 LGALS9CQ6DKI2 356 aa9.65□□□□□ -0.86
VEGFA-201ENST00000230480 ZNF575Q86XF7 245 aa9.65□□□□□ -0.86
VEGFA-201ENST00000230480 C16orf74Q96GX8 76 aa9.65□□□□□ -0.86
VEGFA-201ENST00000230480 TMEM167BQ9NRX6 74 aa9.65□□□□□ -0.86
VEGFA-201ENST00000230480 GNG13Q9P2W3 67 aa9.65□□□□□ -0.86
VEGFA-201ENST00000230480 EPDR1Q9UM22 224 aa9.65□□□□□ -0.86
VEGFA-201ENST00000230480 KLF12Q9Y4X4 402 aa9.65□□□□□ -0.86
VEGFA-201ENST00000230480 LENEPQ9Y5L5 61 aa9.65□□□□□ -0.86
VEGFA-201ENST00000230480 FAT2Q9NYQ8 4349 aa9.64□□□□□ -0.87
VEGFA-201ENST00000230480 DEFB130BP0DP73 79 aa9.64□□□□□ -0.87
VEGFA-201ENST00000230480 DEFB130AP0DP74 79 aa9.64□□□□□ -0.87
VEGFA-201ENST00000230480 CSN1S1P47710 185 aa9.64□□□□□ -0.87
VEGFA-201ENST00000230480 DAZ2Q13117 558 aaKnown RBP9.64□□□□□ -0.87
VEGFA-201ENST00000230480 TMEM241Q24JQ0 296 aa9.64□□□□□ -0.87
VEGFA-201ENST00000230480 C5orf17Q8NAS9 161 aa9.64□□□□□ -0.87
VEGFA-201ENST00000230480 C8orf49Q96NF6 230 aa9.64□□□□□ -0.87
VEGFA-201ENST00000230480 SNHG12Q9BXW3 62 aa9.64□□□□□ -0.87
VEGFA-201ENST00000230480 RPH3ALQ9UNE2 315 aa9.64□□□□□ -0.87
VEGFA-201ENST00000230480 TIMM8BQ9Y5J9 83 aaPredicted RBP9.64□□□□□ -0.87
VEGFA-201ENST00000230480 BIRC6Q9NR09 4857 aa9.64□□□□□ -0.87
VEGFA-201ENST00000230480 MAP1LC3B2A6NCE7 125 aa9.63□□□□□ -0.87
VEGFA-201ENST00000230480 DLEU1O43261 78 aa9.63□□□□□ -0.87
VEGFA-201ENST00000230480 LY6G6CO95867 125 aa9.63□□□□□ -0.87
VEGFA-201ENST00000230480 UBE2G2P60604 165 aa9.63□□□□□ -0.87
VEGFA-201ENST00000230480 DAD1P61803 113 aa9.63□□□□□ -0.87
VEGFA-201ENST00000230480 KCNIP4Q6PIL6 250 aa9.63□□□□□ -0.87
VEGFA-201ENST00000230480 Q6ZTI0 123 aa9.63□□□□□ -0.87
VEGFA-201ENST00000230480 MAP1LC3BQ9GZQ8 125 aa9.63□□□□□ -0.87
VEGFA-201ENST00000230480 MANBALQ9NQG1 85 aa9.63□□□□□ -0.87
VEGFA-201ENST00000230480 MDFICQ9P1T7 246 aa9.63□□□□□ -0.87
VEGFA-201ENST00000230480 IGHV1OR15-1A0A075B7D0 117 aa9.62□□□□□ -0.87
VEGFA-201ENST00000230480 TRAV34A0A0B4J273 112 aa9.62□□□□□ -0.87
VEGFA-201ENST00000230480 CBY3A6NI87 242 aa9.62□□□□□ -0.87
VEGFA-201ENST00000230480 F6UZH7 168 aa9.62□□□□□ -0.87
VEGFA-201ENST00000230480 SPINK4O60575 86 aa9.62□□□□□ -0.87
VEGFA-201ENST00000230480 MUC21Q5SSG8 566 aa9.62□□□□□ -0.87
VEGFA-201ENST00000230480 CMTM2Q8TAZ6 248 aa9.62□□□□□ -0.87
VEGFA-201ENST00000230480 SMIM7Q9BQ49 75 aa9.62□□□□□ -0.87
VEGFA-201ENST00000230480 PSG8Q9UQ74 426 aa9.62□□□□□ -0.87
VEGFA-201ENST00000230480 TEX48A0A1B0GUV7 120 aa9.61□□□□□ -0.87
VEGFA-201ENST00000230480 GNRH2O43555 120 aa9.61□□□□□ -0.87
VEGFA-201ENST00000230480 CRIP1P50238 77 aa9.61□□□□□ -0.87
VEGFA-201ENST00000230480 TCL1AP56279 114 aa9.61□□□□□ -0.87
VEGFA-201ENST00000230480 TCTAP57738 103 aa9.61□□□□□ -0.87
VEGFA-201ENST00000230480 TDRG1Q3Y452 100 aa9.61□□□□□ -0.87
VEGFA-201ENST00000230480 NAGKQ9UJ70 344 aa9.61□□□□□ -0.87
VEGFA-201ENST00000230480 TRAV9-1A0A075B6T8 112 aa9.6□□□□□ -0.87
VEGFA-201ENST00000230480 GAGE12BA1L429 117 aa9.6□□□□□ -0.87
VEGFA-201ENST00000230480 GAGE7O76087 117 aa9.6□□□□□ -0.87
VEGFA-201ENST00000230480 GAGE12FP0CL80 117 aa9.6□□□□□ -0.87
VEGFA-201ENST00000230480 GAGE12GP0CL81 117 aa9.6□□□□□ -0.87
VEGFA-201ENST00000230480 GAGE12IP0CL82 117 aa9.6□□□□□ -0.87
VEGFA-201ENST00000230480 HTN3P15516 51 aa9.6□□□□□ -0.87
VEGFA-201ENST00000230480 ATP5G3P48201 142 aa9.6□□□□□ -0.87
VEGFA-201ENST00000230480 RPL23P62829 140 aaKnown RBP9.6□□□□□ -0.87
VEGFA-201ENST00000230480 MEF2BQ02080 365 aaPredicted RBP9.6□□□□□ -0.87
VEGFA-201ENST00000230480 ADIRFQ15847 76 aa9.6□□□□□ -0.87
VEGFA-201ENST00000230480 C18orf15Q96N68 181 aa9.6□□□□□ -0.87
VEGFA-201ENST00000230480 ZNF25P17030 456 aaPredicted RBP9.59□□□□□ -0.87
VEGFA-201ENST00000230480 ANKRD39Q53RE8 183 aa9.59□□□□□ -0.87
VEGFA-201ENST00000230480 IBA57Q5T440 356 aaKnown RBP9.59□□□□□ -0.87
VEGFA-201ENST00000230480 POM121L12Q8N7R1 296 aa9.59□□□□□ -0.87
VEGFA-201ENST00000230480 TMEM75Q8N9X5 138 aa9.59□□□□□ -0.87
VEGFA-201ENST00000230480 ATG101Q9BSB4 218 aa9.59□□□□□ -0.87
VEGFA-201ENST00000230480 IGHV3-16A0A0C4DH30 117 aa9.58□□□□□ -0.88
VEGFA-201ENST00000230480 SERTM2A0A1B0GWG4 89 aa9.58□□□□□ -0.88
VEGFA-201ENST00000230480 PEX7O00628 323 aa9.58□□□□□ -0.88
VEGFA-201ENST00000230480 PAGE4O60829 102 aa9.58□□□□□ -0.88
VEGFA-201ENST00000230480 ESDP10768 282 aa9.58□□□□□ -0.88
VEGFA-201ENST00000230480 COX8CQ7Z4L0 72 aa9.58□□□□□ -0.88
VEGFA-201ENST00000230480 VSIG2Q96IQ7 327 aa9.58□□□□□ -0.88
VEGFA-201ENST00000230480 IGKV3D-20A0A0C4DH25 116 aa9.57□□□□□ -0.88
VEGFA-201ENST00000230480 ATP5G1P05496 136 aa9.57□□□□□ -0.88
VEGFA-201ENST00000230480 TEX43Q6ZNM6 134 aa9.57□□□□□ -0.88
VEGFA-201ENST00000230480 PRNTQ86SH4 94 aa9.57□□□□□ -0.88
VEGFA-201ENST00000230480 TXNDC17Q9BRA2 123 aa9.57□□□□□ -0.88
VEGFA-201ENST00000230480 MIEN1Q9BRT3 115 aa9.57□□□□□ -0.88
VEGFA-201ENST00000230480 MRPL16Q9NX20 251 aaKnown RBP9.57□□□□□ -0.88
VEGFA-201ENST00000230480 F5H768 121 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms