RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 MRAP2Q96G30 205 aa22.09■■□□□ 1.13
PABPN1-201ENST00000216727 HBDP02042 147 aa22.08■■□□□ 1.13
PABPN1-201ENST00000216727 GATA1P15976 413 aaPredicted RBP22.08■■□□□ 1.13
PABPN1-201ENST00000216727 NRACQ8N912 160 aa22.07■■□□□ 1.12
PABPN1-201ENST00000216727 ZNF705AQ6ZN79 300 aaPredicted RBP22.07■■□□□ 1.12
PABPN1-201ENST00000216727 OR4C46A6NHA9 309 aa22.06■■□□□ 1.12
PABPN1-201ENST00000216727 FHL3Q13643 280 aa22.06■■□□□ 1.12
PABPN1-201ENST00000216727 TMEM61Q8N0U2 210 aa22.06■■□□□ 1.12
PABPN1-201ENST00000216727 DPH3P1Q9H4G8 78 aa22.06■■□□□ 1.12
PABPN1-201ENST00000216727 IGKV3-20P01619 116 aa22.06■■□□□ 1.12
PABPN1-201ENST00000216727 AMTNQ6UX39 209 aa22.06■■□□□ 1.12
PABPN1-201ENST00000216727 RAX2Q96IS3 184 aa22.06■■□□□ 1.12
PABPN1-201ENST00000216727 LINC01006Q8NI28 216 aa22.05■■□□□ 1.12
PABPN1-201ENST00000216727 FASNP49327 2511 aaKnown RBP22.05■■□□□ 1.12
PABPN1-201ENST00000216727 Q8N8P6 123 aa22.04■■□□□ 1.12
PABPN1-201ENST00000216727 ZNF418Q8TF45 676 aaPredicted RBP22.04■■□□□ 1.12
PABPN1-201ENST00000216727 LINC01545Q5VT33 79 aa22.04■■□□□ 1.12
PABPN1-201ENST00000216727 DYNLRB2Q8TF09 96 aa22.04■■□□□ 1.12
PABPN1-201ENST00000216727 IGLV2-18A0A075B6J9 118 aa22.03■■□□□ 1.12
PABPN1-201ENST00000216727 TRAV26-2A0A0B4J265 109 aa22.03■■□□□ 1.12
PABPN1-201ENST00000216727 A8MTW9 85 aa22.03■■□□□ 1.12
PABPN1-201ENST00000216727 SPRY2O43597 315 aa22.03■■□□□ 1.12
PABPN1-201ENST00000216727 CD28P10747 220 aa22.03■■□□□ 1.12
PABPN1-201ENST00000216727 HILS1P60008 231 aa22.03■■□□□ 1.12
PABPN1-201ENST00000216727 DEFB114Q30KQ6 69 aa22.03■■□□□ 1.12
PABPN1-201ENST00000216727 AP1S3Q96PC3 154 aa22.03■■□□□ 1.12
PABPN1-201ENST00000216727 NF1P21359 2839 aa22.03■■□□□ 1.12
PABPN1-201ENST00000216727 TRAV12-2A0A075B6T6 113 aa22.02■■□□□ 1.12
PABPN1-201ENST00000216727 CD7P09564 240 aa22.02■■□□□ 1.12
PABPN1-201ENST00000216727 SPINK13Q1W4C9 94 aa22.02■■□□□ 1.12
PABPN1-201ENST00000216727 MAJINQ3KP22 176 aa22.02■■□□□ 1.12
PABPN1-201ENST00000216727 HIST2H2BDQ6DRA6 164 aa22.02■■□□□ 1.12
PABPN1-201ENST00000216727 IGLC3P0DOY3 106 aa22.02■■□□□ 1.12
PABPN1-201ENST00000216727 DEFB131AP59861 70 aa22.02■■□□□ 1.12
PABPN1-201ENST00000216727 HLA-DRB4P13762 266 aa22.01■■□□□ 1.11
PABPN1-201ENST00000216727 LBHQ53QV2 105 aaPredicted RBP22.01■■□□□ 1.11
PABPN1-201ENST00000216727 C14orf178Q8N769 122 aaPredicted RBP22.01■■□□□ 1.11
PABPN1-201ENST00000216727 HLA-DRB4X5D2U9 266 aa22.01■■□□□ 1.11
PABPN1-201ENST00000216727 AGRNO00468 2067 aa22■■□□□ 1.11
PABPN1-201ENST00000216727 SORL1Q92673 2214 aa22■■□□□ 1.11
PABPN1-201ENST00000216727 UQCR10Q9UDW1 63 aa22■■□□□ 1.11
PABPN1-201ENST00000216727 TSSC4Q9Y5U2 329 aaPredicted RBP22■■□□□ 1.11
PABPN1-201ENST00000216727 C11orf44Q8N8P7 122 aa21.99■■□□□ 1.11
PABPN1-201ENST00000216727 MTORP42345 2549 aa21.99■■□□□ 1.11
PABPN1-201ENST00000216727 CCL24O00175 119 aa21.99■■□□□ 1.11
PABPN1-201ENST00000216727 FCER1GP30273 86 aa21.99■■□□□ 1.11
PABPN1-201ENST00000216727 POM121L12Q8N7R1 296 aa21.99■■□□□ 1.11
PABPN1-201ENST00000216727 IGHV1OR15-1A0A075B7D0 117 aa21.98■■□□□ 1.11
PABPN1-201ENST00000216727 IGHV3-16A0A0C4DH30 117 aa21.98■■□□□ 1.11
PABPN1-201ENST00000216727 IGLL1P15814 213 aa21.98■■□□□ 1.11
PABPN1-201ENST00000216727 FXYD7P58549 80 aa21.98■■□□□ 1.11
PABPN1-201ENST00000216727 C9orf85Q96MD7 179 aa21.98■■□□□ 1.11
PABPN1-201ENST00000216727 MUC4Q99102 2169 aa21.98■■□□□ 1.11
PABPN1-201ENST00000216727 CITED2Q99967 270 aaPredicted RBP21.97■■□□□ 1.11
PABPN1-201ENST00000216727 KNCNA6PVL3 124 aa21.97■■□□□ 1.11
PABPN1-201ENST00000216727 H3BMM0 161 aa21.97■■□□□ 1.11
PABPN1-201ENST00000216727 CD300EQ496F6 205 aaPredicted RBP21.97■■□□□ 1.11
PABPN1-201ENST00000216727 MRPL52Q86TS9 123 aaKnown RBP21.97■■□□□ 1.11
PABPN1-201ENST00000216727 SPAG8Q99932 426 aaPredicted RBP21.97■■□□□ 1.11
PABPN1-201ENST00000216727 CUBNO60494 3623 aa21.96■■□□□ 1.11
PABPN1-201ENST00000216727 H0Y8G0 127 aa21.96■■□□□ 1.11
PABPN1-201ENST00000216727 KIF25-AS1Q9Y6Z4 181 aa21.96■■□□□ 1.11
PABPN1-201ENST00000216727 HECTD1Q9ULT8 2610 aa21.96■■□□□ 1.11
PABPN1-201ENST00000216727 TRAV25A0A0B4J276 109 aa21.96■■□□□ 1.11
PABPN1-201ENST00000216727 A0A1W2PRX2 142 aa21.96■■□□□ 1.11
PABPN1-201ENST00000216727 Q8N1Y9 231 aa21.95■■□□□ 1.1
PABPN1-201ENST00000216727 IFI27L1Q96BM0 104 aa21.95■■□□□ 1.1
PABPN1-201ENST00000216727 MAP6D1Q9H9H5 199 aa21.95■■□□□ 1.1
PABPN1-201ENST00000216727 RASL10AQ92737 203 aa21.94■■□□□ 1.1
PABPN1-201ENST00000216727 SMR3AQ99954 134 aa21.94■■□□□ 1.1
PABPN1-201ENST00000216727 C20orf78Q9BR46 151 aa21.94■■□□□ 1.1
PABPN1-201ENST00000216727 MCRIP2Q9BUT9 160 aaKnown RBP21.94■■□□□ 1.1
PABPN1-201ENST00000216727 ST20Q9HBF5 79 aa21.94■■□□□ 1.1
PABPN1-201ENST00000216727 NDUFA7O95182 113 aa21.94■■□□□ 1.1
PABPN1-201ENST00000216727 ZNF256Q9Y2P7 627 aaPredicted RBP21.93■■□□□ 1.1
PABPN1-201ENST00000216727 M0R143 59 aa21.92■■□□□ 1.1
PABPN1-201ENST00000216727 PPP1R17O96001 155 aa21.92■■□□□ 1.1
PABPN1-201ENST00000216727 LINC00315P59091 139 aa21.92■■□□□ 1.1
PABPN1-201ENST00000216727 LGALS9BQ3B8N2 356 aa21.92■■□□□ 1.1
PABPN1-201ENST00000216727 LGALS9CQ6DKI2 356 aa21.92■■□□□ 1.1
PABPN1-201ENST00000216727 C2orf88Q9BSF0 95 aa21.92■■□□□ 1.1
PABPN1-201ENST00000216727 SMIM2Q9BVW6 85 aa21.92■■□□□ 1.1
PABPN1-201ENST00000216727 MDFICQ9P1T7 246 aa21.92■■□□□ 1.1
PABPN1-201ENST00000216727 MGPP08493 103 aa21.92■■□□□ 1.1
PABPN1-201ENST00000216727 LAGE3Q14657 143 aa21.92■■□□□ 1.1
PABPN1-201ENST00000216727 SNHG12Q9BXW3 62 aa21.92■■□□□ 1.1
PABPN1-201ENST00000216727 SMIM17P0DL12 118 aa21.91■■□□□ 1.1
PABPN1-201ENST00000216727 JMJD8Q96S16 334 aa21.91■■□□□ 1.1
PABPN1-201ENST00000216727 HSBP1L1C9JCN9 74 aa21.9■■□□□ 1.1
PABPN1-201ENST00000216727 SUMO2P61956 95 aaKnown RBP21.9■■□□□ 1.1
PABPN1-201ENST00000216727 EREGO14944 169 aa21.9■■□□□ 1.1
PABPN1-201ENST00000216727 TMEM158Q8WZ71 300 aa21.9■■□□□ 1.1
PABPN1-201ENST00000216727 HIVEP2P31629 2446 aa21.9■■□□□ 1.1
PABPN1-201ENST00000216727 TRGV11A0A075B6L2 103 aa21.89■■□□□ 1.1
PABPN1-201ENST00000216727 SYT8Q8NBV8 401 aa21.89■■□□□ 1.1
PABPN1-201ENST00000216727 PMCHL2Q9BQD1 86 aa21.89■■□□□ 1.1
PABPN1-201ENST00000216727 hDV102S1A0JD36 115 aa21.89■■□□□ 1.09
PABPN1-201ENST00000216727 RBMY1BA6NDE4 496 aaKnown RBP21.89■■□□□ 1.09
PABPN1-201ENST00000216727 RBMY1EA6NEQ0 496 aaKnown RBP21.89■■□□□ 1.09
PABPN1-201ENST00000216727 LY6G6DO95868 133 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms