RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 PFN1P07737 140 aaKnown RBP10.39□□□□□ -0.75
UPK3A-201ENST00000216211 DAZ2Q13117 558 aaKnown RBP10.39□□□□□ -0.75
UPK3A-201ENST00000216211 ELOBQ15370 118 aa10.39□□□□□ -0.75
UPK3A-201ENST00000216211 ESRGQ1W209 222 aa10.39□□□□□ -0.75
UPK3A-201ENST00000216211 CMTM2Q8TAZ6 248 aa10.39□□□□□ -0.75
UPK3A-201ENST00000216211 MRPL53Q96EL3 112 aaKnown RBP10.39□□□□□ -0.75
UPK3A-201ENST00000216211 SFRP2Q96HF1 295 aa10.39□□□□□ -0.75
UPK3A-201ENST00000216211 FMC1Q96HJ9 113 aa10.39□□□□□ -0.75
UPK3A-201ENST00000216211 LINC00479Q96M42 142 aa10.39□□□□□ -0.75
UPK3A-201ENST00000216211 IMMP2LQ96T52 175 aa10.39□□□□□ -0.75
UPK3A-201ENST00000216211 KRTAP1-5Q9BYS1 174 aa10.39□□□□□ -0.75
UPK3A-201ENST00000216211 AAMDCQ9H7C9 122 aa10.39□□□□□ -0.75
UPK3A-201ENST00000216211 GSN-AS1Q9NRJ2 163 aa10.39□□□□□ -0.75
UPK3A-201ENST00000216211 APOBP04114 4563 aaKnown RBP10.38□□□□□ -0.75
UPK3A-201ENST00000216211 TRAV34A0A0B4J273 112 aa10.38□□□□□ -0.75
UPK3A-201ENST00000216211 UBE2G1P62253 170 aa10.38□□□□□ -0.75
UPK3A-201ENST00000216211 BAGE2Q86Y30 109 aa10.38□□□□□ -0.75
UPK3A-201ENST00000216211 C11orf72Q8NBR9 251 aa10.38□□□□□ -0.75
UPK3A-201ENST00000216211 OR10G8Q8NGN5 311 aa10.38□□□□□ -0.75
UPK3A-201ENST00000216211 FAM19A4Q96LR4 140 aa10.38□□□□□ -0.75
UPK3A-201ENST00000216211 LINC00477Q96M19 166 aa10.38□□□□□ -0.75
UPK3A-201ENST00000216211 AGPAT4-IT1Q9H0P7 198 aa10.38□□□□□ -0.75
UPK3A-201ENST00000216211 SERTM2A0A1B0GWG4 89 aa10.37□□□□□ -0.75
UPK3A-201ENST00000216211 KLLNB2CW77 178 aa10.37□□□□□ -0.75
UPK3A-201ENST00000216211 DIRC3C9JPN6 131 aa10.37□□□□□ -0.75
UPK3A-201ENST00000216211 H3BNG1 76 aa10.37□□□□□ -0.75
UPK3A-201ENST00000216211 ZNF324O75467 553 aaPredicted RBP10.37□□□□□ -0.75
UPK3A-201ENST00000216211 RNASE4P34096 147 aaKnown RBP10.37□□□□□ -0.75
UPK3A-201ENST00000216211 UPK3BQ9BT76 320 aa10.37□□□□□ -0.75
UPK3A-201ENST00000216211 OSTCQ9NRP0 149 aa10.37□□□□□ -0.75
UPK3A-201ENST00000216211 TRBV24-1A0A075B6N3 115 aa10.36□□□□□ -0.75
UPK3A-201ENST00000216211 TRGV2A0A075B6R0 118 aa10.36□□□□□ -0.75
UPK3A-201ENST00000216211 IGKV2-40A0A087WW87 121 aaPredicted RBP10.36□□□□□ -0.75
UPK3A-201ENST00000216211 TRGV1A0A0A0MS02 117 aa10.36□□□□□ -0.75
UPK3A-201ENST00000216211 K7EQM0 130 aa10.36□□□□□ -0.75
UPK3A-201ENST00000216211 LTAP01374 205 aa10.36□□□□□ -0.75
UPK3A-201ENST00000216211 IGKV2D-40P01614 121 aaPredicted RBP10.36□□□□□ -0.75
UPK3A-201ENST00000216211 IGLV2-11P01706 119 aa10.36□□□□□ -0.75
UPK3A-201ENST00000216211 RAB5AP20339 215 aa10.36□□□□□ -0.75
UPK3A-201ENST00000216211 S100PP25815 95 aa10.36□□□□□ -0.75
UPK3A-201ENST00000216211 CSN1S1P47710 185 aa10.36□□□□□ -0.75
UPK3A-201ENST00000216211 TTC32Q5I0X7 151 aa10.36□□□□□ -0.75
UPK3A-201ENST00000216211 TMEM75Q8N9X5 138 aa10.36□□□□□ -0.75
UPK3A-201ENST00000216211 VSIG2Q96IQ7 327 aa10.36□□□□□ -0.75
UPK3A-201ENST00000216211 MLST8Q9BVC4 326 aa10.36□□□□□ -0.75
UPK3A-201ENST00000216211 RPH3ALQ9UNE2 315 aa10.36□□□□□ -0.75
UPK3A-201ENST00000216211 MRPS16Q9Y3D3 137 aaKnown RBP10.36□□□□□ -0.75
UPK3A-201ENST00000216211 A0A096LPF7 62 aa10.35□□□□□ -0.75
UPK3A-201ENST00000216211 FBLL1A6NHQ2 334 aaKnown RBP10.35□□□□□ -0.75
UPK3A-201ENST00000216211 GPX1P07203 203 aa10.35□□□□□ -0.75
UPK3A-201ENST00000216211 CXCL1P09341 107 aa10.35□□□□□ -0.75
UPK3A-201ENST00000216211 ANXA2RQ3ZCQ2 193 aa10.35□□□□□ -0.75
UPK3A-201ENST00000216211 PRR9Q5T870 116 aa10.35□□□□□ -0.75
UPK3A-201ENST00000216211 C9orf47Q6ZRZ4 202 aa10.35□□□□□ -0.75
UPK3A-201ENST00000216211 GOLT1AQ6ZVE7 132 aa10.35□□□□□ -0.75
UPK3A-201ENST00000216211 FAM231DQ6ZW35 169 aa10.35□□□□□ -0.75
UPK3A-201ENST00000216211 SPATA12Q7Z6I5 190 aa10.35□□□□□ -0.75
UPK3A-201ENST00000216211 VGLL1Q99990 258 aa10.35□□□□□ -0.75
UPK3A-201ENST00000216211 LINC00467Q9BRT7 94 aa10.35□□□□□ -0.75
UPK3A-201ENST00000216211 BIN3Q9NQY0 253 aa10.35□□□□□ -0.75
UPK3A-201ENST00000216211 TP53TG3Q9ULZ0 132 aa10.35□□□□□ -0.75
UPK3A-201ENST00000216211 URGCP-MRPS24S4R325 110 aa10.35□□□□□ -0.75
UPK3A-201ENST00000216211 TGIF2-C20orf24A0A0A6YYL0 155 aa10.34□□□□□ -0.75
UPK3A-201ENST00000216211 SPINK4O60575 86 aa10.34□□□□□ -0.75
UPK3A-201ENST00000216211 CDK2AP2O75956 126 aa10.34□□□□□ -0.75
UPK3A-201ENST00000216211 MGST1P10620 155 aaKnown RBP10.34□□□□□ -0.75
UPK3A-201ENST00000216211 CRISP2P16562 243 aa10.34□□□□□ -0.75
UPK3A-201ENST00000216211 ERVFC1-1P60608 527 aa10.34□□□□□ -0.75
UPK3A-201ENST00000216211 TMEM78Q5T7P6 136 aa10.34□□□□□ -0.75
UPK3A-201ENST00000216211 KCNIP4Q6PIL6 250 aa10.34□□□□□ -0.75
UPK3A-201ENST00000216211 Q6ZQT7 251 aa10.34□□□□□ -0.75
UPK3A-201ENST00000216211 Q86TA4 180 aa10.34□□□□□ -0.75
UPK3A-201ENST00000216211 TMEM183AQ8IXX5 376 aa10.34□□□□□ -0.75
UPK3A-201ENST00000216211 ZFP30Q9Y2G7 519 aa10.34□□□□□ -0.75
UPK3A-201ENST00000216211 V9GYV3 84 aa10.34□□□□□ -0.75
UPK3A-201ENST00000216211 A0A1W2PPQ1 181 aa10.33□□□□□ -0.76
UPK3A-201ENST00000216211 TCL1AP56279 114 aa10.33□□□□□ -0.76
UPK3A-201ENST00000216211 FLI1Q01543 452 aaPredicted RBP10.33□□□□□ -0.76
UPK3A-201ENST00000216211 ZFAND2AQ8N6M9 145 aa10.33□□□□□ -0.76
UPK3A-201ENST00000216211 BTF3L4Q96K17 158 aa10.33□□□□□ -0.76
UPK3A-201ENST00000216211 C18orf15Q96N68 181 aa10.33□□□□□ -0.76
UPK3A-201ENST00000216211 IL36BQ9NZH7 164 aa10.33□□□□□ -0.76
UPK3A-201ENST00000216211 ZNF492Q9P255 531 aa10.33□□□□□ -0.76
UPK3A-201ENST00000216211 PSG8Q9UQ74 426 aa10.33□□□□□ -0.76
UPK3A-201ENST00000216211 TRAV9-1A0A075B6T8 112 aa10.32□□□□□ -0.76
UPK3A-201ENST00000216211 IBA57Q5T440 356 aaKnown RBP10.32□□□□□ -0.76
UPK3A-201ENST00000216211 MAPKAPK5-AS1Q8N8E1 139 aa10.32□□□□□ -0.76
UPK3A-201ENST00000216211 SGK494Q96LW2 274 aa10.32□□□□□ -0.76
UPK3A-201ENST00000216211 TRAV8-1A0A0A6YYK1 113 aa10.31□□□□□ -0.76
UPK3A-201ENST00000216211 RBAKDNA6NC62 111 aa10.31□□□□□ -0.76
UPK3A-201ENST00000216211 IGHV3-53P01767 116 aa10.31□□□□□ -0.76
UPK3A-201ENST00000216211 TYMSP04818 313 aa10.31□□□□□ -0.76
UPK3A-201ENST00000216211 PRNTQ86SH4 94 aa10.31□□□□□ -0.76
UPK3A-201ENST00000216211 NHLRC2Q8NBF2 726 aa10.31□□□□□ -0.76
UPK3A-201ENST00000216211 Q8TAT8 98 aa10.31□□□□□ -0.76
UPK3A-201ENST00000216211 RNASE7Q9H1E1 156 aaKnown RBP10.31□□□□□ -0.76
UPK3A-201ENST00000216211 MRPL16Q9NX20 251 aaKnown RBP10.31□□□□□ -0.76
UPK3A-201ENST00000216211 IGHV1OR15-1A0A075B7D0 117 aa10.3□□□□□ -0.76
UPK3A-201ENST00000216211 C19orf71A6NCJ1 209 aa10.3□□□□□ -0.76
UPK3A-201ENST00000216211 C1orf196B1AJZ1 125 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms