RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 SLC50A1Q9BRV3 221 aa8.07□□□□□ -1.12
CX3CL1-201ENST00000006053 LRRK2Q5S007 2527 aa8.07□□□□□ -1.12
CX3CL1-201ENST00000006053 A0A087WX48 190 aa8.06□□□□□ -1.12
CX3CL1-201ENST00000006053 IGHV7-4-1A0A0J9YVY3 117 aa8.06□□□□□ -1.12
CX3CL1-201ENST00000006053 SRSF1Q07955 248 aaKnown RBP eCLIP8.06□□□□□ -1.12
CX3CL1-201ENST00000006053 CCL21O00585 134 aa8.06□□□□□ -1.12
CX3CL1-201ENST00000006053 C12orf74Q32Q52 190 aa8.06□□□□□ -1.12
CX3CL1-201ENST00000006053 PIMREGQ9BSJ6 248 aa8.06□□□□□ -1.12
CX3CL1-201ENST00000006053 MSRB2Q9Y3D2 182 aa8.06□□□□□ -1.12
CX3CL1-201ENST00000006053 LINC01548A6NM66 108 aa8.06□□□□□ -1.12
CX3CL1-201ENST00000006053 M0R381 172 aa8.06□□□□□ -1.12
CX3CL1-201ENST00000006053 RAX2Q96IS3 184 aa8.06□□□□□ -1.12
CX3CL1-201ENST00000006053 TRAV8-2A0A0B4J237 113 aa8.05□□□□□ -1.12
CX3CL1-201ENST00000006053 CLPSL1A2RUU4 121 aa8.05□□□□□ -1.12
CX3CL1-201ENST00000006053 RBAKDNA6NC62 111 aa8.05□□□□□ -1.12
CX3CL1-201ENST00000006053 E9PLD3 99 aa8.05□□□□□ -1.12
CX3CL1-201ENST00000006053 FAM110DQ8TAY7 271 aaPredicted RBP8.05□□□□□ -1.12
CX3CL1-201ENST00000006053 KIR2DL4Q99706 377 aa8.05□□□□□ -1.12
CX3CL1-201ENST00000006053 VPREB3Q9UKI3 123 aa8.05□□□□□ -1.12
CX3CL1-201ENST00000006053 K7ENP7 123 aa8.05□□□□□ -1.12
CX3CL1-201ENST00000006053 ZFP36P26651 326 aaKnown RBP8.05□□□□□ -1.12
CX3CL1-201ENST00000006053 C16orf92Q96LL3 132 aa8.05□□□□□ -1.12
CX3CL1-201ENST00000006053 METTL26Q96S19 204 aa8.05□□□□□ -1.12
CX3CL1-201ENST00000006053 IGF1P05019 195 aa8.04□□□□□ -1.12
CX3CL1-201ENST00000006053 FHL3Q13643 280 aa8.04□□□□□ -1.12
CX3CL1-201ENST00000006053 CCDC140Q96MF4 163 aa8.04□□□□□ -1.12
CX3CL1-201ENST00000006053 SCGB3A1Q96QR1 104 aa8.04□□□□□ -1.12
CX3CL1-201ENST00000006053 PTPN13Q12923 2485 aa8.04□□□□□ -1.12
CX3CL1-201ENST00000006053 CDSNQ15517 529 aa8.04□□□□□ -1.12
CX3CL1-201ENST00000006053 TTC32Q5I0X7 151 aa8.04□□□□□ -1.12
CX3CL1-201ENST00000006053 NOTCH2Q04721 2471 aa8.04□□□□□ -1.12
CX3CL1-201ENST00000006053 SFTA2Q6UW10 78 aa8.04□□□□□ -1.12
CX3CL1-201ENST00000006053 LINC00527Q9UJ94 153 aa8.04□□□□□ -1.12
CX3CL1-201ENST00000006053 DOPEY2Q9Y3R5 2298 aa8.04□□□□□ -1.12
CX3CL1-201ENST00000006053 H7C1H1 209 aa8.03□□□□□ -1.12
CX3CL1-201ENST00000006053 NHLRC4P0CG21 123 aaPredicted RBP8.03□□□□□ -1.12
CX3CL1-201ENST00000006053 S100A4P26447 101 aaKnown RBP8.03□□□□□ -1.12
CX3CL1-201ENST00000006053 PLNP26678 52 aa8.03□□□□□ -1.12
CX3CL1-201ENST00000006053 EBI3Q14213 229 aa8.03□□□□□ -1.12
CX3CL1-201ENST00000006053 PRR9Q5T870 116 aa8.03□□□□□ -1.12
CX3CL1-201ENST00000006053 MINOS1Q5TGZ0 78 aa8.03□□□□□ -1.12
CX3CL1-201ENST00000006053 DEFB104AQ8WTQ1 72 aa8.03□□□□□ -1.12
CX3CL1-201ENST00000006053 SMIM2Q9BVW6 85 aa8.03□□□□□ -1.12
CX3CL1-201ENST00000006053 MINOS1-NBL1R4GNA1 71 aa8.03□□□□□ -1.12
CX3CL1-201ENST00000006053 CCDC168Q8NDH2 2452 aa8.03□□□□□ -1.12
CX3CL1-201ENST00000006053 F8VRH5 84 aa8.03□□□□□ -1.12
CX3CL1-201ENST00000006053 MGPP08493 103 aa8.03□□□□□ -1.12
CX3CL1-201ENST00000006053 DEFB1P60022 68 aa8.03□□□□□ -1.12
CX3CL1-201ENST00000006053 PTH2Q96A98 100 aa8.03□□□□□ -1.12
CX3CL1-201ENST00000006053 CREBBPQ92793 2442 aa8.03□□□□□ -1.12
CX3CL1-201ENST00000006053 NOTCH3Q9UM47 2321 aa8.03□□□□□ -1.12
CX3CL1-201ENST00000006053 OOSP1A8MZH6 123 aa8.03□□□□□ -1.12
CX3CL1-201ENST00000006053 EEF1AKMT3Q96AZ1 226 aa8.03□□□□□ -1.12
CX3CL1-201ENST00000006053 RPL39LQ96EH5 51 aaKnown RBP8.03□□□□□ -1.12
CX3CL1-201ENST00000006053 C14orf178Q8N769 122 aaPredicted RBP8.02□□□□□ -1.13
CX3CL1-201ENST00000006053 CITED2Q99967 270 aaPredicted RBP8.02□□□□□ -1.13
CX3CL1-201ENST00000006053 HLA-DRB4P13762 266 aa8.02□□□□□ -1.13
CX3CL1-201ENST00000006053 GAGE2BQ13066 116 aa8.02□□□□□ -1.13
CX3CL1-201ENST00000006053 GAGE2EQ4V326 116 aa8.02□□□□□ -1.13
CX3CL1-201ENST00000006053 CRYBG3Q68DQ2 2970 aa8.02□□□□□ -1.13
CX3CL1-201ENST00000006053 NFE4Q86UQ8 179 aa8.02□□□□□ -1.13
CX3CL1-201ENST00000006053 SETD2Q9BYW2 2564 aaPredicted RBP8.02□□□□□ -1.13
CX3CL1-201ENST00000006053 GAGE2DQ9UEU5 116 aa8.02□□□□□ -1.13
CX3CL1-201ENST00000006053 HLA-DRB4X5D2U9 266 aa8.02□□□□□ -1.13
CX3CL1-201ENST00000006053 IGKV3-7A0A075B6H7 116 aa8.01□□□□□ -1.13
CX3CL1-201ENST00000006053 MYMXA0A1B0GTQ4 84 aa8.01□□□□□ -1.13
CX3CL1-201ENST00000006053 TAL2Q16559 108 aa8.01□□□□□ -1.13
CX3CL1-201ENST00000006053 RRN3P1Q2M238 152 aa8.01□□□□□ -1.13
CX3CL1-201ENST00000006053 ABCA12Q86UK0 2595 aa8.01□□□□□ -1.13
CX3CL1-201ENST00000006053 SUMO2P61956 95 aaKnown RBP8.01□□□□□ -1.13
CX3CL1-201ENST00000006053 FAM159AQ6UWV7 190 aa8.01□□□□□ -1.13
CX3CL1-201ENST00000006053 C9orf47Q6ZRZ4 202 aa8.01□□□□□ -1.13
CX3CL1-201ENST00000006053 FLNCQ14315 2725 aa8.01□□□□□ -1.13
CX3CL1-201ENST00000006053 TRBV7-3A0A075B6L6 115 aa8.01□□□□□ -1.13
CX3CL1-201ENST00000006053 TRAV25A0A0B4J276 109 aa8.01□□□□□ -1.13
CX3CL1-201ENST00000006053 SAA4P35542 130 aa8.01□□□□□ -1.13
CX3CL1-201ENST00000006053 NDUFV3P56181 108 aaKnown RBP8.01□□□□□ -1.13
CX3CL1-201ENST00000006053 MEIG1Q5JSS6 88 aa8.01□□□□□ -1.13
CX3CL1-201ENST00000006053 C20orf173Q96LM9 149 aa8.01□□□□□ -1.13
CX3CL1-201ENST00000006053 RPL11P62913 178 aaKnown RBP8□□□□□ -1.13
CX3CL1-201ENST00000006053 ORMDL2Q53FV1 153 aa8□□□□□ -1.13
CX3CL1-201ENST00000006053 SCGB1D4Q6XE38 83 aa8□□□□□ -1.13
CX3CL1-201ENST00000006053 TMEM219Q86XT9 240 aa8□□□□□ -1.13
CX3CL1-201ENST00000006053 PHLDA3Q9Y5J5 127 aa8□□□□□ -1.13
CX3CL1-201ENST00000006053 ZNF462Q96JM2 2506 aa8□□□□□ -1.13
CX3CL1-201ENST00000006053 RASL10AQ92737 203 aa8□□□□□ -1.13
CX3CL1-201ENST00000006053 PRO0461Q9UI25 63 aa8□□□□□ -1.13
CX3CL1-201ENST00000006053 HOXA3O43365 443 aaPredicted RBP8□□□□□ -1.13
CX3CL1-201ENST00000006053 C5orf47Q569G3 176 aa8□□□□□ -1.13
CX3CL1-201ENST00000006053 C2orf66Q6UXQ4 117 aa8□□□□□ -1.13
CX3CL1-201ENST00000006053 PRADC1Q9BSG0 188 aa8□□□□□ -1.13
CX3CL1-201ENST00000006053 SIRPDQ9H106 197 aa8□□□□□ -1.13
CX3CL1-201ENST00000006053 IGHV3OR16-10A0A075B7F0 116 aa7.99□□□□□ -1.13
CX3CL1-201ENST00000006053 TRAV12-1A0A0B4J245 112 aa7.99□□□□□ -1.13
CX3CL1-201ENST00000006053 ZNF815PA8K554 130 aa7.99□□□□□ -1.13
CX3CL1-201ENST00000006053 LGALS1P09382 135 aaKnown RBP7.99□□□□□ -1.13
CX3CL1-201ENST00000006053 EMP1P54849 157 aa7.99□□□□□ -1.13
CX3CL1-201ENST00000006053 UBTD1Q9HAC8 227 aa7.99□□□□□ -1.13
CX3CL1-201ENST00000006053 USP9XQ93008 2570 aaPredicted RBP7.99□□□□□ -1.13
CX3CL1-201ENST00000006053 IGHV4-4A0A075B6R2 117 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms