RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 CSMD2Q7Z408 3487 aa11.19□□□□□ -0.62
SCARB2-221ENST00000640341 OOSP1A8MZH6 123 aa11.19□□□□□ -0.62
SCARB2-221ENST00000640341 NPFFO15130 113 aa11.19□□□□□ -0.62
SCARB2-221ENST00000640341 CENPVL3A0A0U1RRI6 287 aa11.18□□□□□ -0.62
SCARB2-221ENST00000640341 EBI3Q14213 229 aa11.18□□□□□ -0.62
SCARB2-221ENST00000640341 C14orf178Q8N769 122 aaPredicted RBP11.18□□□□□ -0.62
SCARB2-221ENST00000640341 K7ERU9 68 aa11.18□□□□□ -0.62
SCARB2-221ENST00000640341 H3BRM9 83 aa11.18□□□□□ -0.62
SCARB2-221ENST00000640341 ARL3P36405 182 aa11.18□□□□□ -0.62
SCARB2-221ENST00000640341 RPL24P83731 157 aaKnown RBP11.18□□□□□ -0.62
SCARB2-221ENST00000640341 OR4X2Q8NGF9 303 aa11.18□□□□□ -0.62
SCARB2-221ENST00000640341 CHAC1Q9BUX1 264 aa11.18□□□□□ -0.62
SCARB2-221ENST00000640341 DPM2O94777 84 aa11.17□□□□□ -0.62
SCARB2-221ENST00000640341 C1orf122Q6ZSJ8 110 aa11.17□□□□□ -0.62
SCARB2-221ENST00000640341 TRAV41A0A0B4J266 112 aa11.17□□□□□ -0.62
SCARB2-221ENST00000640341 NEGR1Q7Z3B1 354 aa11.17□□□□□ -0.62
SCARB2-221ENST00000640341 NOTCH3Q9UM47 2321 aa11.17□□□□□ -0.62
SCARB2-221ENST00000640341 RAB9AP51151 201 aa11.16□□□□□ -0.62
SCARB2-221ENST00000640341 C20orf173Q96LM9 149 aa11.16□□□□□ -0.62
SCARB2-221ENST00000640341 HHLA3Q9XRX5 114 aa11.16□□□□□ -0.62
SCARB2-221ENST00000640341 TRBV25-1A0A075B6N4 114 aa11.16□□□□□ -0.62
SCARB2-221ENST00000640341 PF4V1P10720 104 aa11.16□□□□□ -0.62
SCARB2-221ENST00000640341 RNASE4P34096 147 aaKnown RBP11.16□□□□□ -0.62
SCARB2-221ENST00000640341 LAGE3Q14657 143 aa11.16□□□□□ -0.62
SCARB2-221ENST00000640341 MTURNQ8N3F0 131 aa11.16□□□□□ -0.62
SCARB2-221ENST00000640341 Q8N8P6 123 aa11.16□□□□□ -0.62
SCARB2-221ENST00000640341 IGHV7-4-1A0A0J9YVY3 117 aa11.16□□□□□ -0.62
SCARB2-221ENST00000640341 SMIM13P0DJ93 91 aa11.16□□□□□ -0.62
SCARB2-221ENST00000640341 FABP2P12104 132 aa11.16□□□□□ -0.62
SCARB2-221ENST00000640341 AGRNO00468 2067 aa11.16□□□□□ -0.62
SCARB2-221ENST00000640341 SAMD5Q5TGI4 173 aa11.15□□□□□ -0.62
SCARB2-221ENST00000640341 COX8CQ7Z4L0 72 aa11.15□□□□□ -0.62
SCARB2-221ENST00000640341 RPL39LQ96EH5 51 aaKnown RBP11.15□□□□□ -0.62
SCARB2-221ENST00000640341 AJUBAQ96IF1 538 aa11.15□□□□□ -0.62
SCARB2-221ENST00000640341 PHLDA3Q9Y5J5 127 aa11.15□□□□□ -0.62
SCARB2-221ENST00000640341 C5orf56Q8N8D9 126 aa11.15□□□□□ -0.62
SCARB2-221ENST00000640341 LMO4P61968 165 aa11.15□□□□□ -0.63
SCARB2-221ENST00000640341 EMP1P54849 157 aa11.14□□□□□ -0.63
SCARB2-221ENST00000640341 MAPKAPK5-AS1Q8N8E1 139 aa11.14□□□□□ -0.63
SCARB2-221ENST00000640341 TMEM190Q8WZ59 177 aa11.14□□□□□ -0.63
SCARB2-221ENST00000640341 TRBV7-1A0A0A6YYK4 115 aa11.14□□□□□ -0.63
SCARB2-221ENST00000640341 A0A1W2PPM0 123 aa11.14□□□□□ -0.63
SCARB2-221ENST00000640341 IGKV3-20P01619 116 aa11.14□□□□□ -0.63
SCARB2-221ENST00000640341 SFTA2Q6UW10 78 aa11.14□□□□□ -0.63
SCARB2-221ENST00000640341 DPF1Q92782 380 aa11.14□□□□□ -0.63
SCARB2-221ENST00000640341 CNFNQ9BYD5 112 aa11.14□□□□□ -0.63
SCARB2-221ENST00000640341 C19orf84I3L1E1 186 aa11.13□□□□□ -0.63
SCARB2-221ENST00000640341 K7EP34 96 aa11.13□□□□□ -0.63
SCARB2-221ENST00000640341 GNRH2O43555 120 aa11.13□□□□□ -0.63
SCARB2-221ENST00000640341 OR10J6PQ8NGY7 276 aa11.13□□□□□ -0.63
SCARB2-221ENST00000640341 NOTCH2Q04721 2471 aa11.13□□□□□ -0.63
SCARB2-221ENST00000640341 UTP20O75691 2785 aaKnown RBP11.13□□□□□ -0.63
SCARB2-221ENST00000640341 ITPR1Q14643 2758 aa11.13□□□□□ -0.63
SCARB2-221ENST00000640341 SCGB2A2Q13296 93 aa11.13□□□□□ -0.63
SCARB2-221ENST00000640341 HIST1H4GQ99525 98 aa11.13□□□□□ -0.63
SCARB2-221ENST00000640341 FLNCQ14315 2725 aa11.13□□□□□ -0.63
SCARB2-221ENST00000640341 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.12□□□□□ -0.63
SCARB2-221ENST00000640341 ATP5LO75964 103 aa11.12□□□□□ -0.63
SCARB2-221ENST00000640341 SRSF1Q07955 248 aaKnown RBP eCLIP11.12□□□□□ -0.63
SCARB2-221ENST00000640341 NRACQ8N912 160 aa11.12□□□□□ -0.63
SCARB2-221ENST00000640341 SCGB3A1Q96QR1 104 aa11.12□□□□□ -0.63
SCARB2-221ENST00000640341 LRRK2Q5S007 2527 aa11.12□□□□□ -0.63
SCARB2-221ENST00000640341 BLCAPP62952 87 aa11.12□□□□□ -0.63
SCARB2-221ENST00000640341 ANXA2RQ3ZCQ2 193 aa11.12□□□□□ -0.63
SCARB2-221ENST00000640341 RBAKDNA6NC62 111 aa11.12□□□□□ -0.63
SCARB2-221ENST00000640341 USP9XQ93008 2570 aaPredicted RBP11.11□□□□□ -0.63
SCARB2-221ENST00000640341 EDN2P20800 178 aa11.11□□□□□ -0.63
SCARB2-221ENST00000640341 Q6ZS46 218 aa11.11□□□□□ -0.63
SCARB2-221ENST00000640341 H3BUX3 64 aa11.11□□□□□ -0.63
SCARB2-221ENST00000640341 IGHV4-38-2P0DP08 117 aa11.11□□□□□ -0.63
SCARB2-221ENST00000640341 AMTNQ6UX39 209 aa11.11□□□□□ -0.63
SCARB2-221ENST00000640341 MOB4Q9Y3A3 225 aa11.11□□□□□ -0.63
SCARB2-221ENST00000640341 ABCA2Q9BZC7 2435 aa11.11□□□□□ -0.63
SCARB2-221ENST00000640341 IGLV2-18A0A075B6J9 118 aa11.1□□□□□ -0.63
SCARB2-221ENST00000640341 F5H697 171 aa11.1□□□□□ -0.63
SCARB2-221ENST00000640341 SIVA1O15304 175 aa11.1□□□□□ -0.63
SCARB2-221ENST00000640341 UFSP1Q6NVU6 142 aa11.1□□□□□ -0.63
SCARB2-221ENST00000640341 CYSLTR1Q9Y271 337 aa11.1□□□□□ -0.63
SCARB2-221ENST00000640341 ZANQ9Y493 2812 aa11.1□□□□□ -0.63
SCARB2-221ENST00000640341 ASIPP42127 132 aa11.09□□□□□ -0.63
SCARB2-221ENST00000640341 TMEM95Q3KNT9 176 aa11.09□□□□□ -0.63
SCARB2-221ENST00000640341 C9orf47Q6ZRZ4 202 aa11.09□□□□□ -0.63
SCARB2-221ENST00000640341 SMIM2Q9BVW6 85 aa11.09□□□□□ -0.63
SCARB2-221ENST00000640341 TLN2Q9Y4G6 2542 aa11.09□□□□□ -0.63
SCARB2-221ENST00000640341 FAM74A4Q5TZK3 123 aa11.09□□□□□ -0.63
SCARB2-221ENST00000640341 JPT2Q9H910 190 aa11.09□□□□□ -0.63
SCARB2-221ENST00000640341 PTPN13Q12923 2485 aa11.09□□□□□ -0.63
SCARB2-221ENST00000640341 GNLYP22749 145 aa11.09□□□□□ -0.63
SCARB2-221ENST00000640341 UCNP55089 124 aa11.09□□□□□ -0.63
SCARB2-221ENST00000640341 SUMO2P61956 95 aaKnown RBP11.09□□□□□ -0.63
SCARB2-221ENST00000640341 A0A087WWL8 130 aa11.08□□□□□ -0.64
SCARB2-221ENST00000640341 IGHV4-61A0A0C4DH41 118 aa11.08□□□□□ -0.64
SCARB2-221ENST00000640341 IGHV4-39P01824 125 aa11.08□□□□□ -0.64
SCARB2-221ENST00000640341 C9orf139Q6ZV77 190 aa11.08□□□□□ -0.64
SCARB2-221ENST00000640341 TRAV21A0A0B4J279 112 aa11.08□□□□□ -0.64
SCARB2-221ENST00000640341 SRSF2Q01130 221 aaKnown RBP11.08□□□□□ -0.64
SCARB2-221ENST00000640341 CSTL1Q9H114 145 aa11.08□□□□□ -0.64
SCARB2-221ENST00000640341 CHTOPQ9Y3Y2 248 aaKnown RBP11.08□□□□□ -0.64
SCARB2-221ENST00000640341 MYO9AB2RTY4 2548 aa11.08□□□□□ -0.64
SCARB2-221ENST00000640341 A0A087WX48 190 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms