RNA–Protein interactions for RNA: ENST00000640001.1

HNRNPU-223, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5 BASIC

Gene HNRNPU, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-223	ENST00000640001	ABCA12	Q86UK0	2595 aa		5.95	□□□□□ -1.46
HNRNPU-223	ENST00000640001	ATP5L	O75964	103 aa		5.95	□□□□□ -1.46
HNRNPU-223	ENST00000640001	IGHG2	P01859	326 aa		5.95	□□□□□ -1.46
HNRNPU-223	ENST00000640001	GCSH	P23434	173 aa		5.95	□□□□□ -1.46
HNRNPU-223	ENST00000640001	SETD2	Q9BYW2	2564 aa	Predicted RBP	5.95	□□□□□ -1.46
HNRNPU-223	ENST00000640001		A6NDX4	124 aa		5.95	□□□□□ -1.46
HNRNPU-223	ENST00000640001	MRPS12	O15235	138 aa	Known RBP	5.95	□□□□□ -1.46
HNRNPU-223	ENST00000640001	ASPM	Q8IZT6	3477 aa		5.95	□□□□□ -1.46
HNRNPU-223	ENST00000640001		Q6ZS46	218 aa		5.94	□□□□□ -1.46
HNRNPU-223	ENST00000640001	ZNF256	Q9Y2P7	627 aa	Predicted RBP	5.94	□□□□□ -1.46
HNRNPU-223	ENST00000640001	HOXA3	O43365	443 aa	Predicted RBP	5.94	□□□□□ -1.46
HNRNPU-223	ENST00000640001	SRSF1	Q07955	248 aa	Known RBP eCLIP	5.94	□□□□□ -1.46	3e-7	■■□□□ 14.5
HNRNPU-223	ENST00000640001	ZNF747	Q9BV97	191 aa		5.94	□□□□□ -1.46
HNRNPU-223	ENST00000640001	SMPX	Q9UHP9	88 aa		5.94	□□□□□ -1.46
HNRNPU-223	ENST00000640001	CFAP47	Q6ZTR5	3102 aa		5.94	□□□□□ -1.46
HNRNPU-223	ENST00000640001	RBAKDN	A6NC62	111 aa		5.94	□□□□□ -1.46
HNRNPU-223	ENST00000640001		A6NDN8	102 aa		5.94	□□□□□ -1.46
HNRNPU-223	ENST00000640001	LOXL1	Q08397	574 aa	Predicted RBP	5.94	□□□□□ -1.46
HNRNPU-223	ENST00000640001	SCGB1D4	Q6XE38	83 aa		5.94	□□□□□ -1.46
HNRNPU-223	ENST00000640001	ATM	Q13315	3056 aa		5.94	□□□□□ -1.46
HNRNPU-223	ENST00000640001	TRAV12-2	A0A075B6T6	113 aa		5.94	□□□□□ -1.46
HNRNPU-223	ENST00000640001		A0A087WWL8	130 aa		5.94	□□□□□ -1.46
HNRNPU-223	ENST00000640001	C2orf70	A6NJV1	201 aa		5.94	□□□□□ -1.46
HNRNPU-223	ENST00000640001	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	5.94	□□□□□ -1.46
HNRNPU-223	ENST00000640001		H3BUA1	57 aa		5.94	□□□□□ -1.46
HNRNPU-223	ENST00000640001	LAGE3	Q14657	143 aa		5.94	□□□□□ -1.46
HNRNPU-223	ENST00000640001	KIR2DL4	Q99706	377 aa		5.94	□□□□□ -1.46
HNRNPU-223	ENST00000640001	SPAG8	Q99932	426 aa	Predicted RBP	5.94	□□□□□ -1.46
HNRNPU-223	ENST00000640001	MEGF9	Q9H1U4	602 aa		5.94	□□□□□ -1.46
HNRNPU-223	ENST00000640001	MS4A6A	Q9H2W1	248 aa		5.94	□□□□□ -1.46
HNRNPU-223	ENST00000640001	GNRH2	O43555	120 aa		5.93	□□□□□ -1.46
HNRNPU-223	ENST00000640001	SPINK13	Q1W4C9	94 aa		5.93	□□□□□ -1.46
HNRNPU-223	ENST00000640001	SAMD13	Q5VXD3	122 aa		5.93	□□□□□ -1.46
HNRNPU-223	ENST00000640001	DPH3P1	Q9H4G8	78 aa		5.93	□□□□□ -1.46
HNRNPU-223	ENST00000640001	SCGB1A1	P11684	91 aa		5.93	□□□□□ -1.46
HNRNPU-223	ENST00000640001	CTRL	P40313	264 aa		5.93	□□□□□ -1.46
HNRNPU-223	ENST00000640001	LINC01559	Q495D7	138 aa		5.93	□□□□□ -1.46
HNRNPU-223	ENST00000640001	TTC32	Q5I0X7	151 aa		5.93	□□□□□ -1.46
HNRNPU-223	ENST00000640001	GTSCR1	Q86UQ5	136 aa		5.93	□□□□□ -1.46
HNRNPU-223	ENST00000640001	MRPL53	Q96EL3	112 aa	Known RBP	5.93	□□□□□ -1.46
HNRNPU-223	ENST00000640001	YAE1D1	Q9NRH1	226 aa		5.93	□□□□□ -1.46
HNRNPU-223	ENST00000640001	AVP	P01185	164 aa		5.93	□□□□□ -1.46
HNRNPU-223	ENST00000640001	IGF1	P05019	195 aa		5.93	□□□□□ -1.46
HNRNPU-223	ENST00000640001	DEFB136	Q30KP8	78 aa		5.93	□□□□□ -1.46
HNRNPU-223	ENST00000640001	DUX3	Q96PT4	197 aa		5.93	□□□□□ -1.46
HNRNPU-223	ENST00000640001		J3QLI3	93 aa		5.92	□□□□□ -1.46
HNRNPU-223	ENST00000640001	DPM2	O94777	84 aa		5.92	□□□□□ -1.46
HNRNPU-223	ENST00000640001	C10orf99	Q6UWK7	81 aa		5.92	□□□□□ -1.46
HNRNPU-223	ENST00000640001	IGKV3D-20	A0A0C4DH25	116 aa		5.92	□□□□□ -1.46
HNRNPU-223	ENST00000640001	CLPSL1	A2RUU4	121 aa		5.92	□□□□□ -1.46
HNRNPU-223	ENST00000640001	IGKC	P01834	107 aa		5.92	□□□□□ -1.46
HNRNPU-223	ENST00000640001	RAX2	Q96IS3	184 aa		5.92	□□□□□ -1.46
HNRNPU-223	ENST00000640001	TP73-AS1	Q9UF72	201 aa		5.92	□□□□□ -1.46
HNRNPU-223	ENST00000640001	VPREB3	Q9UKI3	123 aa		5.92	□□□□□ -1.46
HNRNPU-223	ENST00000640001	KLK9	Q9UKQ9	250 aa		5.92	□□□□□ -1.46
HNRNPU-223	ENST00000640001	MRPS16	Q9Y3D3	137 aa	Known RBP	5.92	□□□□□ -1.46
HNRNPU-223	ENST00000640001	EMP1	P54849	157 aa		5.92	□□□□□ -1.46
HNRNPU-223	ENST00000640001		Q6ZVH6	145 aa		5.92	□□□□□ -1.46
HNRNPU-223	ENST00000640001	NEGR1	Q7Z3B1	354 aa		5.92	□□□□□ -1.46
HNRNPU-223	ENST00000640001	TRAV8-2	A0A0B4J237	113 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	DUSP14	O95147	198 aa	Known RBP	5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	C9orf47	Q6ZRZ4	202 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	KLHL30-AS1	Q8NEE0	82 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	C20orf173	Q96LM9	149 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	DLEU1	O43261	78 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	DEFB131A	P59861	70 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	TCTEX1D4	Q5JR98	221 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001		Q8N8P6	123 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	CSTL1	Q9H114	145 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	PEMT	Q9UBM1	199 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	DKK2	Q9UBU2	259 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	CENPE	Q02224	2701 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	IGHV3-73	A0A0B4J1V6	119 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	OR11H12	B2RN74	326 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	IGLC6	P0CF74	106 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	ZNF124	Q15973	351 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	ORMDL2	Q53FV1	153 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	OR11H1	Q8NG94	326 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	OR11H2	Q8NH07	326 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	LAMA5	O15230	3695 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	PPP1R17	O96001	155 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	HOXD3	P31249	432 aa	Predicted RBP	5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	HERVK_113	P61574	105 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	SRSF9	Q13242	221 aa	Known RBP eCLIP	5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	DEFB113	Q30KQ7	82 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	ZC2HC1B	Q5TFG8	222 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001		Q6ZQT7	251 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	ZNF493	Q6ZR52	646 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	URB1-AS1	Q96HZ7	61 aa		5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	NAA38	Q9BRA0	125 aa	Known RBP	5.91	□□□□□ -1.46
HNRNPU-223	ENST00000640001	GAGE10	A6NGK3	116 aa		5.9	□□□□□ -1.46
HNRNPU-223	ENST00000640001	MRPL52	Q86TS9	123 aa	Known RBP	5.9	□□□□□ -1.46
HNRNPU-223	ENST00000640001	LINC01587	Q99440	93 aa		5.9	□□□□□ -1.46
HNRNPU-223	ENST00000640001	HIST1H4G	Q99525	98 aa		5.9	□□□□□ -1.46
HNRNPU-223	ENST00000640001	MAP1A	P78559	2803 aa	Predicted RBP	5.9	□□□□□ -1.46
HNRNPU-223	ENST00000640001	PRRC2A	P48634	2157 aa	Known RBP	5.9	□□□□□ -1.46
HNRNPU-223	ENST00000640001	PSMB2	P49721	201 aa		5.9	□□□□□ -1.46
HNRNPU-223	ENST00000640001	SUMO2	P61956	95 aa	Known RBP	5.9	□□□□□ -1.46
HNRNPU-223	ENST00000640001	PIFO	Q8TCI5	191 aa		5.9	□□□□□ -1.46
HNRNPU-223	ENST00000640001	ABCA2	Q9BZC7	2435 aa		5.9	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms