RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 TRAV8-3A0A0A6YYJ7 113 aa4.46□□□□□ -1.69
SCARB2-218ENST00000639715 INS-IGF2F8WCM5 200 aa4.46□□□□□ -1.69
SCARB2-218ENST00000639715 LYNX1G3V0Z9 82 aa4.46□□□□□ -1.69
SCARB2-218ENST00000639715 LYNX1P0DP58 116 aa4.46□□□□□ -1.69
SCARB2-218ENST00000639715 COL8A2P25067 703 aa4.46□□□□□ -1.69
SCARB2-218ENST00000639715 PHLDA1Q8WV24 401 aaPredicted RBP4.46□□□□□ -1.69
SCARB2-218ENST00000639715 LINC00477Q96M19 166 aa4.46□□□□□ -1.69
SCARB2-218ENST00000639715 SHANK2-AS3Q9BTD1 123 aa4.46□□□□□ -1.69
SCARB2-218ENST00000639715 TMEM14CQ9P0S9 112 aa4.46□□□□□ -1.69
SCARB2-218ENST00000639715 MYO18BQ8IUG5 2567 aa4.46□□□□□ -1.69
SCARB2-218ENST00000639715 E7EQL1 145 aa4.46□□□□□ -1.7
SCARB2-218ENST00000639715 RS1O15537 224 aa4.46□□□□□ -1.7
SCARB2-218ENST00000639715 LINC01620Q4KN68 170 aa4.46□□□□□ -1.7
SCARB2-218ENST00000639715 ZNF493Q6ZR52 646 aa4.46□□□□□ -1.7
SCARB2-218ENST00000639715 Q86TA4 180 aa4.46□□□□□ -1.7
SCARB2-218ENST00000639715 WIPF1O43516 503 aa4.46□□□□□ -1.7
SCARB2-218ENST00000639715 SMCPP49901 116 aaPredicted RBP4.46□□□□□ -1.7
SCARB2-218ENST00000639715 MORN5Q5VZ52 161 aa4.46□□□□□ -1.7
SCARB2-218ENST00000639715 EXOC3-AS1Q8N2X6 119 aa4.46□□□□□ -1.7
SCARB2-218ENST00000639715 BRK1Q8WUW1 75 aa4.46□□□□□ -1.7
SCARB2-218ENST00000639715 ZNRD1Q9P1U0 126 aa4.46□□□□□ -1.7
SCARB2-218ENST00000639715 PHLDA3Q9Y5J5 127 aa4.46□□□□□ -1.7
SCARB2-218ENST00000639715 MGPP08493 103 aa4.46□□□□□ -1.7
SCARB2-218ENST00000639715 EIF4EBP1Q13541 118 aaPredicted RBP4.46□□□□□ -1.7
SCARB2-218ENST00000639715 C4orf26Q17RF5 130 aa4.46□□□□□ -1.7
SCARB2-218ENST00000639715 RASL10AQ92737 203 aa4.46□□□□□ -1.7
SCARB2-218ENST00000639715 S4R3C0 116 aa4.46□□□□□ -1.7
SCARB2-218ENST00000639715 F8WDY8 70 aa4.45□□□□□ -1.7
SCARB2-218ENST00000639715 FHL3Q13643 280 aa4.45□□□□□ -1.7
SCARB2-218ENST00000639715 LAGE3Q14657 143 aa4.45□□□□□ -1.7
SCARB2-218ENST00000639715 C1orf195Q5TG92 126 aa4.45□□□□□ -1.7
SCARB2-218ENST00000639715 FXYD5Q96DB9 178 aa4.45□□□□□ -1.7
SCARB2-218ENST00000639715 DNAH12Q6ZR08 3092 aa4.45□□□□□ -1.7
SCARB2-218ENST00000639715 CCDC168Q8NDH2 2452 aa4.45□□□□□ -1.7
SCARB2-218ENST00000639715 IGHV3-35A0A0C4DH35 117 aa4.45□□□□□ -1.7
SCARB2-218ENST00000639715 A0A1B0GX51 115 aa4.45□□□□□ -1.7
SCARB2-218ENST00000639715 CFC1BP0CG36 223 aa4.45□□□□□ -1.7
SCARB2-218ENST00000639715 CFC1P0CG37 223 aa4.45□□□□□ -1.7
SCARB2-218ENST00000639715 CGB3P0DN86 165 aa4.45□□□□□ -1.7
SCARB2-218ENST00000639715 CGB7P0DN87 165 aa4.45□□□□□ -1.7
SCARB2-218ENST00000639715 SYNJ2BPP57105 145 aa4.45□□□□□ -1.7
SCARB2-218ENST00000639715 TMEM75Q8N9X5 138 aa4.45□□□□□ -1.7
SCARB2-218ENST00000639715 DSCR8Q96T75 97 aa4.45□□□□□ -1.7
SCARB2-218ENST00000639715 CGB1A6NKQ9 187 aa4.45□□□□□ -1.7
SCARB2-218ENST00000639715 ATOX1O00244 68 aa4.45□□□□□ -1.7
SCARB2-218ENST00000639715 BRWD1-AS2P59051 145 aa4.45□□□□□ -1.7
SCARB2-218ENST00000639715 C10orf105Q8TEF2 133 aa4.45□□□□□ -1.7
SCARB2-218ENST00000639715 CHD8Q9HCK8 2581 aa4.45□□□□□ -1.7
SCARB2-218ENST00000639715 IGHV3-23P01764 117 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 TRGV3P03979 118 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 DAZAP2Q15038 168 aaPredicted RBP4.44□□□□□ -1.7
SCARB2-218ENST00000639715 VMO1Q7Z5L0 202 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 RNF152Q8N8N0 203 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 LINC00574Q9H8X3 128 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 MDFICQ9P1T7 246 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 HCFC1P51610 2035 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 EXPH5Q8NEV8 1989 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 TRBV19A0A075B6N1 114 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.44□□□□□ -1.7
SCARB2-218ENST00000639715 F8VRH5 84 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 IGHG4P01861 327 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 CLEC19AQ6UXS0 136 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 NDUFA11Q86Y39 141 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 IGFBPL1Q8WX77 278 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 LINC00526Q96FQ7 95 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 PROP1O75360 226 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 WT1P19544 449 aaPredicted RBP4.44□□□□□ -1.7
SCARB2-218ENST00000639715 HIST1H4AP62805 103 aaKnown RBP4.44□□□□□ -1.7
SCARB2-218ENST00000639715 PRB3Q04118 309 aaPredicted RBP4.44□□□□□ -1.7
SCARB2-218ENST00000639715 KHDC1LQ5JSQ8 128 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 LINC00322Q6ZN03 302 aaPredicted RBP4.44□□□□□ -1.7
SCARB2-218ENST00000639715 WFDC11Q8NEX6 87 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 IGKV3-7A0A075B6H7 116 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 TNFRSF13BO14836 293 aaPredicted RBP4.44□□□□□ -1.7
SCARB2-218ENST00000639715 COX7CP15954 63 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 CNTFRP26992 372 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 EFNA4P52798 201 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 LINC01587Q99440 93 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 JPT2Q9H910 190 aa4.44□□□□□ -1.7
SCARB2-218ENST00000639715 PLXNB1O43157 2135 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 TNCP24821 2201 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 KLHL30-AS1Q8NEE0 82 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 PRO0628Q9UI54 55 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 A0A0C4DFX4 3053 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 TRBV10-2A0A0K0K1G8 114 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 K7EM74 188 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 LGALS9O00182 355 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 MRPS12O15235 138 aaKnown RBP4.43□□□□□ -1.7
SCARB2-218ENST00000639715 NDUFC2O95298 119 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 ATP5G1P05496 136 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 NPC2P61916 151 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 SEM1Q6ZVN7 128 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 KIR2DL5BQ8NHK3 375 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 COL6A6A6NMZ7 2263 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 IGHV3OR16-13A0A075B7E8 117 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 IGHV3-74A0A0B4J1X5 117 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 LINC01548A6NM66 108 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 PFN2P35080 140 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 TMEM258P61165 79 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms