RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 C8orf59Q8N0T1 100 aaPredicted RBP1.32□□□□□ -2.2
HMHB1-202ENST00000638299 C5orf17Q8NAS9 161 aa1.32□□□□□ -2.2
HMHB1-202ENST00000638299 ATP6V0E2Q8NHE4 81 aa1.32□□□□□ -2.2
HMHB1-202ENST00000638299 VSTM2AQ8TAG5 236 aa1.32□□□□□ -2.2
HMHB1-202ENST00000638299 CYYR1Q96J86 154 aa1.32□□□□□ -2.2
HMHB1-202ENST00000638299 DSCR8Q96T75 97 aa1.32□□□□□ -2.2
HMHB1-202ENST00000638299 NAA60Q9H7X0 242 aa1.32□□□□□ -2.2
HMHB1-202ENST00000638299 SERP1Q9Y6X1 66 aa1.32□□□□□ -2.2
HMHB1-202ENST00000638299 PTPRDP23468 1912 aa1.32□□□□□ -2.2
HMHB1-202ENST00000638299 ZNF609O15014 1411 aa1.32□□□□□ -2.2
HMHB1-202ENST00000638299 MED12LQ86YW9 2145 aa1.31□□□□□ -2.2
HMHB1-202ENST00000638299 RAPGEF2Q9Y4G8 1499 aa1.31□□□□□ -2.2
HMHB1-202ENST00000638299 TRAV14DV4A0A0A6YYC5 116 aa1.31□□□□□ -2.2
HMHB1-202ENST00000638299 TRBV6-8A0A0A6YYG3 113 aa1.31□□□□□ -2.2
HMHB1-202ENST00000638299 TRAV17A0A0B4J275 112 aa1.31□□□□□ -2.2
HMHB1-202ENST00000638299 YPEL1O60688 119 aa1.31□□□□□ -2.2
HMHB1-202ENST00000638299 TNFP01375 233 aa1.31□□□□□ -2.2
HMHB1-202ENST00000638299 IL5P05113 134 aa1.31□□□□□ -2.2
HMHB1-202ENST00000638299 PIRTP0C851 137 aa1.31□□□□□ -2.2
HMHB1-202ENST00000638299 IL7P13232 177 aa1.31□□□□□ -2.2
HMHB1-202ENST00000638299 BRS3P32247 399 aa1.31□□□□□ -2.2
HMHB1-202ENST00000638299 GNG2P59768 71 aa1.31□□□□□ -2.2
HMHB1-202ENST00000638299 KRTAP10-3P60369 221 aa1.31□□□□□ -2.2
HMHB1-202ENST00000638299 INSL4Q14641 139 aa1.31□□□□□ -2.2
HMHB1-202ENST00000638299 Q6AWC8 147 aa1.31□□□□□ -2.2
HMHB1-202ENST00000638299 LYPD1Q8N2G4 141 aa1.31□□□□□ -2.2
HMHB1-202ENST00000638299 ACBD7Q8N6N7 88 aa1.31□□□□□ -2.2
HMHB1-202ENST00000638299 TSKUQ8WUA8 353 aa1.31□□□□□ -2.2
HMHB1-202ENST00000638299 SNHG12Q9BXW3 62 aa1.31□□□□□ -2.2
HMHB1-202ENST00000638299 BAZ2BQ9UIF8 2168 aaKnown RBP1.31□□□□□ -2.2
HMHB1-202ENST00000638299 ATRXP46100 2492 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 TTC37Q6PGP7 1564 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 NINQ8N4C6 2090 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 FREM3P0C091 2139 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 SPHKAPQ2M3C7 1700 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 TRGV4A0A0C4DH28 118 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 A0A1W2PRS3 328 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 IGKCP01834 107 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 SPINK8P0C7L1 97 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 CNBPP62633 177 aaKnown RBP1.3□□□□□ -2.2
HMHB1-202ENST00000638299 OR2T2Q6IF00 324 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 C2orf82Q6UX34 121 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 DYNLRB2Q8TF09 96 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 SPTSSAQ969W0 71 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 LINC00052Q96N35 136 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 LIMD2Q9BT23 127 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 TTTY12Q9BZ98 90 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 RPRMQ9NS64 109 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 TMEM242Q9NWH2 141 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 NDUFA12Q9UI09 145 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 IER3IP1Q9Y5U9 82 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 KTN1Q86UP2 1357 aaKnown RBP1.3□□□□□ -2.2
HMHB1-202ENST00000638299 ZFHX2Q9C0A1 2572 aaPredicted RBP1.3□□□□□ -2.2
HMHB1-202ENST00000638299 CR1P17927 2039 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 PTPRMP28827 1452 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 DISP1Q96F81 1524 aa1.3□□□□□ -2.2
HMHB1-202ENST00000638299 STRCP1A6NGW2 1772 aa1.29□□□□□ -2.2
HMHB1-202ENST00000638299 DOCK1Q14185 1865 aa1.29□□□□□ -2.2
HMHB1-202ENST00000638299 APOC4-APOC2K7ER74 178 aa1.29□□□□□ -2.2
HMHB1-202ENST00000638299 SNCGO76070 127 aa1.29□□□□□ -2.2
HMHB1-202ENST00000638299 APOC2P02655 101 aa1.29□□□□□ -2.2
HMHB1-202ENST00000638299 SLC25A6P12236 298 aa1.29□□□□□ -2.2
HMHB1-202ENST00000638299 IFITM1P13164 125 aa1.29□□□□□ -2.2
HMHB1-202ENST00000638299 IQCJQ1A5X6 159 aa1.29□□□□□ -2.2
HMHB1-202ENST00000638299 HCP5Q6MZN7 132 aa1.29□□□□□ -2.2
HMHB1-202ENST00000638299 CSAG1Q6PB30 78 aa1.29□□□□□ -2.2
HMHB1-202ENST00000638299 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.29□□□□□ -2.2
HMHB1-202ENST00000638299 Q8N8P6 123 aa1.29□□□□□ -2.2
HMHB1-202ENST00000638299 C15orf53Q8NAA6 179 aa1.29□□□□□ -2.2
HMHB1-202ENST00000638299 COPS9Q8WXC6 57 aa1.29□□□□□ -2.2
HMHB1-202ENST00000638299 LINC00526Q96FQ7 95 aa1.29□□□□□ -2.2
HMHB1-202ENST00000638299 TXNDC17Q9BRA2 123 aa1.29□□□□□ -2.2
HMHB1-202ENST00000638299 COL1A2P08123 1366 aa1.29□□□□□ -2.2
HMHB1-202ENST00000638299 CECR2Q9BXF3 1484 aa1.29□□□□□ -2.2
HMHB1-202ENST00000638299 COL5A3P25940 1745 aaPredicted RBP1.29□□□□□ -2.2
HMHB1-202ENST00000638299 ABCA3Q99758 1704 aa1.29□□□□□ -2.2
HMHB1-202ENST00000638299 GBF1Q92538 1859 aa1.29□□□□□ -2.2
HMHB1-202ENST00000638299 MYH8P13535 1937 aa1.28□□□□□ -2.2
HMHB1-202ENST00000638299 CHD3Q12873 2000 aaKnown RBP1.28□□□□□ -2.2
HMHB1-202ENST00000638299 MYOFQ9NZM1 2061 aa1.28□□□□□ -2.2
HMHB1-202ENST00000638299 FREM1Q5H8C1 2179 aa1.28□□□□□ -2.2
HMHB1-202ENST00000638299 NDUFB6O95139 128 aa1.28□□□□□ -2.2
HMHB1-202ENST00000638299 PRB2P02812 416 aaPredicted RBP1.28□□□□□ -2.2
HMHB1-202ENST00000638299 RNASE3P12724 160 aaKnown RBP1.28□□□□□ -2.2
HMHB1-202ENST00000638299 KRTAP10-8P60410 259 aa1.28□□□□□ -2.2
HMHB1-202ENST00000638299 UBE2G1P62253 170 aa1.28□□□□□ -2.2
HMHB1-202ENST00000638299 RBM3P98179 157 aaKnown RBP1.28□□□□□ -2.2
HMHB1-202ENST00000638299 C10orf55Q5SWW7 151 aa1.28□□□□□ -2.2
HMHB1-202ENST00000638299 SVBPQ8N300 66 aa1.28□□□□□ -2.2
HMHB1-202ENST00000638299 PLPP5Q8NEB5 264 aa1.28□□□□□ -2.2
HMHB1-202ENST00000638299 PATE1Q8WXA2 126 aa1.28□□□□□ -2.2
HMHB1-202ENST00000638299 CTTNBP2Q8WZ74 1663 aa1.28□□□□□ -2.2
HMHB1-202ENST00000638299 CASP8AP2Q9UKL3 1982 aa1.28□□□□□ -2.2
HMHB1-202ENST00000638299 DOCK10Q96BY6 2186 aa1.28□□□□□ -2.2
HMHB1-202ENST00000638299 PATJQ8NI35 1801 aa1.27□□□□□ -2.21
HMHB1-202ENST00000638299 LAMB1P07942 1786 aa1.27□□□□□ -2.21
HMHB1-202ENST00000638299 RB1CC1Q8TDY2 1594 aa1.27□□□□□ -2.21
HMHB1-202ENST00000638299 IGKV1D-17A0A075B6S4 117 aa1.27□□□□□ -2.21
HMHB1-202ENST00000638299 SPRR5A0A1B0GTR4 108 aa1.27□□□□□ -2.21
HMHB1-202ENST00000638299 F8W1H4 67 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms