RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 MBP02144 154 aa12.18□□□□□ -0.46
PNKP-230ENST00000638016 FGF8P55075 233 aaPredicted RBP12.18□□□□□ -0.46
PNKP-230ENST00000638016 TDRG1Q3Y452 100 aa12.18□□□□□ -0.46
PNKP-230ENST00000638016 KRTAP17-1Q9BYP8 105 aa12.18□□□□□ -0.46
PNKP-230ENST00000638016 PRO0255Q9UI72 69 aa12.18□□□□□ -0.46
PNKP-230ENST00000638016 ICOSQ9Y6W8 199 aa12.18□□□□□ -0.46
PNKP-230ENST00000638016 BORCS7-ASMTA0A0B4J1R7 106 aa12.17□□□□□ -0.46
PNKP-230ENST00000638016 CXorf1O96002 111 aa12.17□□□□□ -0.46
PNKP-230ENST00000638016 ARL6IP6Q8N6S5 226 aa12.17□□□□□ -0.46
PNKP-230ENST00000638016 RASL10AQ92737 203 aa12.17□□□□□ -0.46
PNKP-230ENST00000638016 LINC00479Q96M42 142 aa12.17□□□□□ -0.46
PNKP-230ENST00000638016 CYTL1Q9NRR1 136 aa12.17□□□□□ -0.46
PNKP-230ENST00000638016 EPDR1Q9UM22 224 aa12.17□□□□□ -0.46
PNKP-230ENST00000638016 PSG8Q9UQ74 426 aa12.17□□□□□ -0.46
PNKP-230ENST00000638016 HHLA3Q9XRX5 114 aa12.17□□□□□ -0.46
PNKP-230ENST00000638016 TRAV34A0A0B4J273 112 aa12.16□□□□□ -0.46
PNKP-230ENST00000638016 TRGV4A0A0C4DH28 118 aa12.16□□□□□ -0.46
PNKP-230ENST00000638016 UBE2G2P60604 165 aa12.16□□□□□ -0.46
PNKP-230ENST00000638016 PRNTQ86SH4 94 aa12.16□□□□□ -0.46
PNKP-230ENST00000638016 TMEM167BQ9NRX6 74 aa12.16□□□□□ -0.46
PNKP-230ENST00000638016 DNAH5Q8TE73 4624 aa12.15□□□□□ -0.46
PNKP-230ENST00000638016 SPXQ9BT56 116 aa12.15□□□□□ -0.46
PNKP-230ENST00000638016 SDF2L1Q9HCN8 221 aa12.15□□□□□ -0.46
PNKP-230ENST00000638016 HSPG2P98160 4391 aa12.14□□□□□ -0.47
PNKP-230ENST00000638016 PCLOQ9Y6V0 5065 aa12.14□□□□□ -0.47
PNKP-230ENST00000638016 LOC100131303A0A0U1RQF7 123 aa12.14□□□□□ -0.47
PNKP-230ENST00000638016 CTXND1A0A1B0GTU2 59 aa12.14□□□□□ -0.47
PNKP-230ENST00000638016 M0R2P5 195 aa12.14□□□□□ -0.47
PNKP-230ENST00000638016 NXPH4O95158 308 aa12.14□□□□□ -0.47
PNKP-230ENST00000638016 GCGP01275 180 aa12.14□□□□□ -0.47
PNKP-230ENST00000638016 FLI1Q01543 452 aaPredicted RBP12.14□□□□□ -0.47
PNKP-230ENST00000638016 CYB561D1Q8N8Q1 229 aa12.14□□□□□ -0.47
PNKP-230ENST00000638016 NDFIP1Q9BT67 221 aa12.14□□□□□ -0.47
PNKP-230ENST00000638016 SERTM2A0A1B0GWG4 89 aa12.13□□□□□ -0.47
PNKP-230ENST00000638016 K7EQD1 137 aa12.13□□□□□ -0.47
PNKP-230ENST00000638016 TTC32Q5I0X7 151 aa12.13□□□□□ -0.47
PNKP-230ENST00000638016 LYPD5Q6UWN5 251 aa12.13□□□□□ -0.47
PNKP-230ENST00000638016 TRAV4A0A0B4J268 109 aa12.12□□□□□ -0.47
PNKP-230ENST00000638016 C9JCJ5 164 aa12.12□□□□□ -0.47
PNKP-230ENST00000638016 MED14OSP0DP75 135 aa12.12□□□□□ -0.47
PNKP-230ENST00000638016 GYPEP15421 78 aa12.12□□□□□ -0.47
PNKP-230ENST00000638016 LINC00315P59091 139 aa12.12□□□□□ -0.47
PNKP-230ENST00000638016 AKR1C8PQ5T2L2 129 aa12.12□□□□□ -0.47
PNKP-230ENST00000638016 DPPA3Q6W0C5 159 aa12.12□□□□□ -0.47
PNKP-230ENST00000638016 OR4C5Q8NGB2 326 aa12.12□□□□□ -0.47
PNKP-230ENST00000638016 TNFRSF18Q9Y5U5 241 aa12.12□□□□□ -0.47
PNKP-230ENST00000638016 APOBP04114 4563 aaKnown RBP12.11□□□□□ -0.47
PNKP-230ENST00000638016 A0A1W2PRE2 83 aa12.11□□□□□ -0.47
PNKP-230ENST00000638016 K7EQM0 130 aa12.11□□□□□ -0.47
PNKP-230ENST00000638016 SIVA1O15304 175 aa12.11□□□□□ -0.47
PNKP-230ENST00000638016 FHITP49789 147 aa12.11□□□□□ -0.47
PNKP-230ENST00000638016 MRPL23Q16540 153 aaKnown RBP12.11□□□□□ -0.47
PNKP-230ENST00000638016 OR11H4Q8NGC9 324 aa12.11□□□□□ -0.47
PNKP-230ENST00000638016 MAP1LC3B2A6NCE7 125 aa12.1□□□□□ -0.47
PNKP-230ENST00000638016 FAM74A7A6NL05 159 aa12.1□□□□□ -0.47
PNKP-230ENST00000638016 IFNA7P01567 189 aa12.1□□□□□ -0.47
PNKP-230ENST00000638016 PFN1P07737 140 aaKnown RBP12.1□□□□□ -0.47
PNKP-230ENST00000638016 SLAQ13239 276 aa12.1□□□□□ -0.47
PNKP-230ENST00000638016 SMUG1Q53HV7 270 aa12.1□□□□□ -0.47
PNKP-230ENST00000638016 NEGR1Q7Z3B1 354 aa12.1□□□□□ -0.47
PNKP-230ENST00000638016 WFDC10BQ8IUB3 73 aa12.1□□□□□ -0.47
PNKP-230ENST00000638016 KCNS1Q96KK3 526 aa12.1□□□□□ -0.47
PNKP-230ENST00000638016 MAP1LC3BQ9GZQ8 125 aa12.1□□□□□ -0.47
PNKP-230ENST00000638016 ARL2-SNX15V9GYD0 113 aa12.1□□□□□ -0.47
PNKP-230ENST00000638016 IGHV3-73A0A0B4J1V6 119 aa12.09□□□□□ -0.47
PNKP-230ENST00000638016 A0A1W2PPQ1 181 aa12.09□□□□□ -0.47
PNKP-230ENST00000638016 C16orf90A8MZG2 172 aa12.09□□□□□ -0.47
PNKP-230ENST00000638016 PEX7O00628 323 aa12.09□□□□□ -0.47
PNKP-230ENST00000638016 RNASE3P12724 160 aaKnown RBP12.09□□□□□ -0.47
PNKP-230ENST00000638016 SRIP30626 198 aa12.09□□□□□ -0.47
PNKP-230ENST00000638016 Q86TA4 180 aa12.09□□□□□ -0.47
PNKP-230ENST00000638016 C9orf85Q96MD7 179 aa12.09□□□□□ -0.47
PNKP-230ENST00000638016 IGKV3D-20A0A0C4DH25 116 aa12.08□□□□□ -0.48
PNKP-230ENST00000638016 PGPEP1LA6NFU8 196 aa12.08□□□□□ -0.48
PNKP-230ENST00000638016 TAAR5O14804 337 aa12.08□□□□□ -0.48
PNKP-230ENST00000638016 ZNF876PQ49A33 203 aa12.08□□□□□ -0.48
PNKP-230ENST00000638016 ZFP69Q49AA0 526 aa12.08□□□□□ -0.48
PNKP-230ENST00000638016 Q6ZRN7 208 aaPredicted RBP12.08□□□□□ -0.48
PNKP-230ENST00000638016 PCNPQ8WW12 178 aaKnown RBP12.08□□□□□ -0.48
PNKP-230ENST00000638016 GATA1P15976 413 aaPredicted RBP12.07□□□□□ -0.48
PNKP-230ENST00000638016 KRTAP10-2P60368 255 aa12.07□□□□□ -0.48
PNKP-230ENST00000638016 ZNF506Q5JVG8 444 aa12.07□□□□□ -0.48
PNKP-230ENST00000638016 SPATA12Q7Z6I5 190 aa12.07□□□□□ -0.48
PNKP-230ENST00000638016 KCNRGQ8N5I3 272 aa12.07□□□□□ -0.48
PNKP-230ENST00000638016 ABCA13Q86UQ4 5058 aa12.07□□□□□ -0.48
PNKP-230ENST00000638016 A0A1B0GV50 99 aa12.06□□□□□ -0.48
PNKP-230ENST00000638016 RS1O15537 224 aa12.06□□□□□ -0.48
PNKP-230ENST00000638016 FUSP35637 526 aaKnown RBP eCLIP12.06□□□□□ -0.48
PNKP-230ENST00000638016 CRIP1P50238 77 aa12.06□□□□□ -0.48
PNKP-230ENST00000638016 CFAP126Q5VTH2 177 aa12.06□□□□□ -0.48
PNKP-230ENST00000638016 SAPCD1Q5SSQ6 148 aa12.05□□□□□ -0.48
PNKP-230ENST00000638016 ZC2HC1AQ96GY0 325 aa12.05□□□□□ -0.48
PNKP-230ENST00000638016 FBLL1A6NHQ2 334 aaKnown RBP12.04□□□□□ -0.48
PNKP-230ENST00000638016 ORM1P02763 201 aa12.04□□□□□ -0.48
PNKP-230ENST00000638016 ZNF345Q14585 488 aa12.04□□□□□ -0.48
PNKP-230ENST00000638016 SLC25A29Q8N8R3 303 aa12.04□□□□□ -0.48
PNKP-230ENST00000638016 NHLRC2Q8NBF2 726 aa12.04□□□□□ -0.48
PNKP-230ENST00000638016 M0R036 132 aa12.03□□□□□ -0.48
PNKP-230ENST00000638016 PPT1P50897 306 aa12.03□□□□□ -0.48
PNKP-230ENST00000638016 CST9LP1Q5W188 147 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms