RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 MROH2AA6NES4 1674 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 MYOM1P52179 1685 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 SLX4Q8IY92 1834 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 hADV29S1A0JD25 119 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 A8MWP4 228 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 SYS1-DBNDD2H3BUS1 97 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 K7EM74 188 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 NPYP01303 97 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 NFYAP23511 347 aaPredicted RBP1.97□□□□□ -2.09
PSPC1-208ENST00000635562 CCL8P80075 99 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 INSL4Q14641 139 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 C15orf32Q32M92 178 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 ETDBQ3ZM63 59 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 ZNF322Q6U7Q0 402 aaPredicted RBP1.97□□□□□ -2.09
PSPC1-208ENST00000635562 NTM-AS1Q6ZSK4 140 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 ADM2Q7Z4H4 148 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 TMEM256Q8N2U0 113 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 LINC01006Q8NI28 216 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 AQP3Q92482 292 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 SPTSSAQ969W0 71 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 MUCL1Q96DR8 90 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 SMDT1Q9H4I9 107 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 COL16A1Q07092 1604 aaPredicted RBP1.97□□□□□ -2.09
PSPC1-208ENST00000635562 MGAMO43451 1857 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 LCTP09848 1927 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 IGLV11-55A0A075B6I3 123 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 MUC21A0A140T8X8 626 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 C17orf51A8MQB3 221 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 HMSDA8MTL9 139 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 J3QLW9 94 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 LECT2O14960 151 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 CREBL2O60519 120 aaPredicted RBP1.96□□□□□ -2.1
PSPC1-208ENST00000635562 IGKV1D-33P01593 117 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 IGKV1-33P01594 117 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 IGHV1-69P01742 117 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 HSPB1P04792 205 aaKnown RBP1.96□□□□□ -2.1
PSPC1-208ENST00000635562 CCKP06307 115 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 CKS2P33552 79 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 FAUP35544 74 aaKnown RBP1.96□□□□□ -2.1
PSPC1-208ENST00000635562 FUT5Q11128 374 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 WFDC2Q14508 124 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 MIAQ16674 131 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 Q1RN00 199 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 C2orf83Q53S99 150 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 LCE3AQ5TA76 89 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 Q6ZQT7 251 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 Q6ZR54 194 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 COMMD6Q7Z4G1 85 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 FAM213BQ8TBF2 198 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 CIRBP-AS1Q8TBR5 109 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 C18orf32Q8TCD1 76 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 SMCR5Q8TEV8 140 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 CHCHD1Q96BP2 118 aaKnown RBP1.96□□□□□ -2.1
PSPC1-208ENST00000635562 MGST2Q99735 147 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 RPS10P5Q9NQ39 176 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 CYTL1Q9NRR1 136 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 ZNF407Q9C0G0 2248 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 MYO16Q9Y6X6 1858 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 CDK13Q14004 1512 aaKnown RBP1.96□□□□□ -2.1
PSPC1-208ENST00000635562 EML5Q05BV3 1969 aa1.96□□□□□ -2.1
PSPC1-208ENST00000635562 NUP188Q5SRE5 1749 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 UNC13BO14795 1591 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 UGGT1Q9NYU2 1555 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 IGLV3-12A0A075B6K2 115 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 TRBV24-1A0A075B6N3 115 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 C19orf71A6NCJ1 209 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 PCNX2A6NKB5 2137 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 H3BUT2 72 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 SLC25A20O43772 301 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 SH2D1AO60880 128 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 IGHV1-46P01743 117 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 GIG44P09565 113 aaPredicted RBP1.95□□□□□ -2.1
PSPC1-208ENST00000635562 TLX1NBP0CAT3 122 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 SLC25A16P16260 332 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 PEBP1P30086 187 aaKnown RBP1.95□□□□□ -2.1
PSPC1-208ENST00000635562 LYZP61626 148 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 ZNF345Q14585 488 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 PMCHL1Q16048 86 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 IGFBP7Q16270 282 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 Q1T7F1 81 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 NMSQ5H8A3 153 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 SPINK14Q6IE38 97 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 Q6P435 159 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 DYNAPQ8N1N2 210 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 SERP2Q8N6R1 65 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 ZNF525Q8N782 197 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 Q8NDZ9 215 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 TYMSOSQ8TAI1 123 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 LINC01600Q96MT4 127 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 LINC00467Q9BRT7 94 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 GABARAPL1Q9H0R8 117 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 CXCL16Q9H2A7 254 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 KIAA1549Q9HCM3 1950 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 AFDNP55196 1824 aaKnown RBP1.95□□□□□ -2.1
PSPC1-208ENST00000635562 PLCH1Q4KWH8 1693 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 PREX1Q8TCU6 1659 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 NOTCH2Q04721 2471 aa1.95□□□□□ -2.1
PSPC1-208ENST00000635562 MUC22E2RYF6 1773 aaPredicted RBP1.95□□□□□ -2.1
PSPC1-208ENST00000635562 NKTRP30414 1462 aaKnown RBP1.94□□□□□ -2.1
PSPC1-208ENST00000635562 KIAA2026Q5HYC2 2103 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms