RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 ALG5Q9Y673 324 aa13.09□□□□□ -0.31
ATG4B-226ENST00000625810 IGHV3-16A0A0C4DH30 117 aa13.08□□□□□ -0.32
ATG4B-226ENST00000625810 CDC34P49427 236 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-226ENST00000625810 ERVFC1-1P60608 527 aa13.08□□□□□ -0.32
ATG4B-226ENST00000625810 HSD17B11Q8NBQ5 300 aa13.08□□□□□ -0.32
ATG4B-226ENST00000625810 KCNS1Q96KK3 526 aa13.08□□□□□ -0.32
ATG4B-226ENST00000625810 TXNDC17Q9BRA2 123 aa13.08□□□□□ -0.32
ATG4B-226ENST00000625810 NDFIP1Q9BT67 221 aa13.08□□□□□ -0.32
ATG4B-226ENST00000625810 SDF2L1Q9HCN8 221 aa13.08□□□□□ -0.32
ATG4B-226ENST00000625810 C9JCJ5 164 aa13.07□□□□□ -0.32
ATG4B-226ENST00000625810 TYMSP04818 313 aa13.07□□□□□ -0.32
ATG4B-226ENST00000625810 ARL14EPLP0DKL9 152 aa13.07□□□□□ -0.32
ATG4B-226ENST00000625810 TVP23CQ96ET8 276 aa13.07□□□□□ -0.32
ATG4B-226ENST00000625810 SGK494Q96LW2 274 aa13.07□□□□□ -0.32
ATG4B-226ENST00000625810 EVI2AP22794 236 aa13.06□□□□□ -0.32
ATG4B-226ENST00000625810 SCRT2Q9NQ03 307 aa13.06□□□□□ -0.32
ATG4B-226ENST00000625810 PGPEP1Q9NXJ5 209 aa13.06□□□□□ -0.32
ATG4B-226ENST00000625810 SERTM2A0A1B0GWG4 89 aa13.05□□□□□ -0.32
ATG4B-226ENST00000625810 K7EQM0 130 aa13.05□□□□□ -0.32
ATG4B-226ENST00000625810 WFDC10BQ8IUB3 73 aa13.05□□□□□ -0.32
ATG4B-226ENST00000625810 ASB13Q8WXK3 278 aa13.05□□□□□ -0.32
ATG4B-226ENST00000625810 STAG3L2P0CL84 134 aa13.04□□□□□ -0.32
ATG4B-226ENST00000625810 STAG3L3P0CL85 134 aa13.04□□□□□ -0.32
ATG4B-226ENST00000625810 C5orf17Q8NAS9 161 aa13.04□□□□□ -0.32
ATG4B-226ENST00000625810 NHLRC2Q8NBF2 726 aa13.04□□□□□ -0.32
ATG4B-226ENST00000625810 OR2G3Q8NGZ4 309 aa13.04□□□□□ -0.32
ATG4B-226ENST00000625810 RAB24Q969Q5 203 aa13.04□□□□□ -0.32
ATG4B-226ENST00000625810 PSMG3Q9BT73 122 aaPredicted RBP13.04□□□□□ -0.32
ATG4B-226ENST00000625810 MED28Q9H204 178 aa13.04□□□□□ -0.32
ATG4B-226ENST00000625810 K7EP13 123 aa13.03□□□□□ -0.32
ATG4B-226ENST00000625810 MBP02144 154 aa13.03□□□□□ -0.32
ATG4B-226ENST00000625810 ATP6V0CP27449 155 aa13.03□□□□□ -0.32
ATG4B-226ENST00000625810 GCHFRP30047 84 aa13.03□□□□□ -0.32
ATG4B-226ENST00000625810 SH2D6Q7Z4S9 175 aa13.03□□□□□ -0.32
ATG4B-226ENST00000625810 MSRB1Q9NZV6 116 aa13.03□□□□□ -0.32
ATG4B-226ENST00000625810 LOC100131303A0A0U1RQF7 123 aa13.02□□□□□ -0.33
ATG4B-226ENST00000625810 TCRAP04437 139 aa13.02□□□□□ -0.33
ATG4B-226ENST00000625810 SERF2P84101 59 aa13.02□□□□□ -0.33
ATG4B-226ENST00000625810 AQP10Q96PS8 301 aa13.02□□□□□ -0.33
ATG4B-226ENST00000625810 BATF3Q9NR55 127 aa13.02□□□□□ -0.33
ATG4B-226ENST00000625810 PSG8Q9UQ74 426 aa13.02□□□□□ -0.33
ATG4B-226ENST00000625810 FBLL1A6NHQ2 334 aaKnown RBP13.01□□□□□ -0.33
ATG4B-226ENST00000625810 TAAR5O14804 337 aa13.01□□□□□ -0.33
ATG4B-226ENST00000625810 DNAH10OSP0CZ25 163 aa13.01□□□□□ -0.33
ATG4B-226ENST00000625810 GATA1P15976 413 aaPredicted RBP13.01□□□□□ -0.33
ATG4B-226ENST00000625810 FUSP35637 526 aaKnown RBP eCLIP13.01□□□□□ -0.33
ATG4B-226ENST00000625810 PPT1P50897 306 aa13.01□□□□□ -0.33
ATG4B-226ENST00000625810 SUMO1P63165 101 aaKnown RBP13.01□□□□□ -0.33
ATG4B-226ENST00000625810 ZNF876PQ49A33 203 aa13.01□□□□□ -0.33
ATG4B-226ENST00000625810 ACTR3CQ9C0K3 210 aaPredicted RBP13.01□□□□□ -0.33
ATG4B-226ENST00000625810 TMEM167BQ9NRX6 74 aa13.01□□□□□ -0.33
ATG4B-226ENST00000625810 CXorf1O96002 111 aa13□□□□□ -0.33
ATG4B-226ENST00000625810 GCGP01275 180 aa13□□□□□ -0.33
ATG4B-226ENST00000625810 CRYGDP07320 174 aa13□□□□□ -0.33
ATG4B-226ENST00000625810 ZNF80P51504 273 aaPredicted RBP13□□□□□ -0.33
ATG4B-226ENST00000625810 ZFP69Q49AA0 526 aa13□□□□□ -0.33
ATG4B-226ENST00000625810 CDPF1Q6NVV7 123 aa13□□□□□ -0.33
ATG4B-226ENST00000625810 PRNTQ86SH4 94 aa13□□□□□ -0.33
ATG4B-226ENST00000625810 C10orf126Q8N4M7 172 aa13□□□□□ -0.33
ATG4B-226ENST00000625810 SUN5Q8TC36 379 aa13□□□□□ -0.33
ATG4B-226ENST00000625810 A0A087WTM6 91 aa12.99□□□□□ -0.33
ATG4B-226ENST00000625810 PTTG1O95997 202 aa12.99□□□□□ -0.33
ATG4B-226ENST00000625810 FLI1Q01543 452 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-226ENST00000625810 SMUG1Q53HV7 270 aa12.99□□□□□ -0.33
ATG4B-226ENST00000625810 PRADC1Q9BSG0 188 aa12.99□□□□□ -0.33
ATG4B-226ENST00000625810 SH3BGRL3Q9H299 93 aa12.99□□□□□ -0.33
ATG4B-226ENST00000625810 EPDR1Q9UM22 224 aa12.99□□□□□ -0.33
ATG4B-226ENST00000625810 TNFSF18Q9UNG2 199 aa12.99□□□□□ -0.33
ATG4B-226ENST00000625810 CIDEAO60543 219 aa12.98□□□□□ -0.33
ATG4B-226ENST00000625810 PFN1P07737 140 aaKnown RBP12.98□□□□□ -0.33
ATG4B-226ENST00000625810 CYB561D1Q8N8Q1 229 aa12.98□□□□□ -0.33
ATG4B-226ENST00000625810 INO80EQ8NBZ0 244 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-226ENST00000625810 C11orf21Q9P2W6 132 aa12.98□□□□□ -0.33
ATG4B-226ENST00000625810 IGHV3-73A0A0B4J1V6 119 aa12.97□□□□□ -0.33
ATG4B-226ENST00000625810 IGHV3-38A0A0C4DH36 116 aa12.97□□□□□ -0.33
ATG4B-226ENST00000625810 RS1O15537 224 aa12.97□□□□□ -0.33
ATG4B-226ENST00000625810 TIRAPP58753 221 aa12.97□□□□□ -0.33
ATG4B-226ENST00000625810 Q5BKY6 102 aa12.97□□□□□ -0.33
ATG4B-226ENST00000625810 CFAP126Q5VTH2 177 aa12.97□□□□□ -0.33
ATG4B-226ENST00000625810 SLC25A29Q8N8R3 303 aa12.97□□□□□ -0.33
ATG4B-226ENST00000625810 BORCS7-ASMTA0A0B4J1R7 106 aa12.96□□□□□ -0.33
ATG4B-226ENST00000625810 TRAV8-6A0A0B4J262 113 aa12.96□□□□□ -0.33
ATG4B-226ENST00000625810 GGTLC3B5MD39 225 aa12.96□□□□□ -0.33
ATG4B-226ENST00000625810 IGLV2-11P01706 119 aa12.96□□□□□ -0.33
ATG4B-226ENST00000625810 RHOHQ15669 191 aa12.96□□□□□ -0.33
ATG4B-226ENST00000625810 SAPCD1Q5SSQ6 148 aa12.96□□□□□ -0.33
ATG4B-226ENST00000625810 DPPA3Q6W0C5 159 aa12.96□□□□□ -0.33
ATG4B-226ENST00000625810 TMEM75Q8N9X5 138 aa12.96□□□□□ -0.33
ATG4B-226ENST00000625810 TRBV6-4A0A1B0GX49 114 aa12.95□□□□□ -0.34
ATG4B-226ENST00000625810 GIPP09681 153 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-226ENST00000625810 OR10J3Q5JRS4 329 aa12.95□□□□□ -0.34
ATG4B-226ENST00000625810 C9orf85Q96MD7 179 aa12.95□□□□□ -0.34
ATG4B-226ENST00000625810 FXYD6-FXYD2A0A087WZ82 144 aa12.94□□□□□ -0.34
ATG4B-226ENST00000625810 A0A1W2PRE2 83 aa12.94□□□□□ -0.34
ATG4B-226ENST00000625810 PGPEP1LA6NFU8 196 aa12.94□□□□□ -0.34
ATG4B-226ENST00000625810 PSCAO43653 123 aa12.94□□□□□ -0.34
ATG4B-226ENST00000625810 ZNF506Q5JVG8 444 aa12.94□□□□□ -0.34
ATG4B-226ENST00000625810 RPL7L1Q6DKI1 246 aaKnown RBP12.94□□□□□ -0.34
ATG4B-226ENST00000625810 BOLA1Q9Y3E2 137 aa12.94□□□□□ -0.34
ATG4B-226ENST00000625810 TRAV34A0A0B4J273 112 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms