RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 PYYP10082 97 aa9.21□□□□□ -0.94
SNX1-214ENST00000625244 CDKN1BP46527 198 aa9.21□□□□□ -0.94
SNX1-214ENST00000625244 OR8A1Q8NGG7 326 aa9.21□□□□□ -0.94
SNX1-214ENST00000625244 TRBV19A0A075B6N1 114 aa9.2□□□□□ -0.94
SNX1-214ENST00000625244 UMAD1C9J7I0 102 aa9.2□□□□□ -0.94
SNX1-214ENST00000625244 H3BQ15 152 aa9.2□□□□□ -0.94
SNX1-214ENST00000625244 H3BTX0 84 aa9.2□□□□□ -0.94
SNX1-214ENST00000625244 SEC11BP0C7V7 166 aa9.2□□□□□ -0.94
SNX1-214ENST00000625244 DAZ2Q13117 558 aaKnown RBP9.2□□□□□ -0.94
SNX1-214ENST00000625244 PSG3Q16557 428 aa9.2□□□□□ -0.94
SNX1-214ENST00000625244 LGALSLQ3ZCW2 172 aaPredicted RBP9.2□□□□□ -0.94
SNX1-214ENST00000625244 LINC01620Q4KN68 170 aa9.2□□□□□ -0.94
SNX1-214ENST00000625244 FAM74A1Q5RGS3 127 aa9.2□□□□□ -0.94
SNX1-214ENST00000625244 FAM167A-AS1Q96KT0 104 aa9.2□□□□□ -0.94
SNX1-214ENST00000625244 PRELID1Q9Y255 219 aa9.2□□□□□ -0.94
SNX1-214ENST00000625244 MUC2Q02817 5179 aa9.2□□□□□ -0.94
SNX1-214ENST00000625244 CXorf1O96002 111 aa9.19□□□□□ -0.94
SNX1-214ENST00000625244 WFDC2Q14508 124 aa9.19□□□□□ -0.94
SNX1-214ENST00000625244 SLC51BQ86UW2 128 aa9.19□□□□□ -0.94
SNX1-214ENST00000625244 IQCF2Q8IXL9 164 aa9.19□□□□□ -0.94
SNX1-214ENST00000625244 C10orf126Q8N4M7 172 aa9.19□□□□□ -0.94
SNX1-214ENST00000625244 RAB24Q969Q5 203 aa9.19□□□□□ -0.94
SNX1-214ENST00000625244 DAZAP1Q96EP5 407 aaKnown RBP9.19□□□□□ -0.94
SNX1-214ENST00000625244 CHAC1Q9BUX1 264 aa9.19□□□□□ -0.94
SNX1-214ENST00000625244 LPAP08519 4548 aa9.18□□□□□ -0.94
SNX1-214ENST00000625244 CTXND1A0A1B0GTU2 59 aa9.18□□□□□ -0.94
SNX1-214ENST00000625244 SLC17A3O00476 420 aa9.18□□□□□ -0.94
SNX1-214ENST00000625244 HMGB3O15347 200 aaKnown RBP9.18□□□□□ -0.94
SNX1-214ENST00000625244 GAS8-AS1O95177 125 aa9.18□□□□□ -0.94
SNX1-214ENST00000625244 ARL14EPLP0DKL9 152 aa9.18□□□□□ -0.94
SNX1-214ENST00000625244 CSN1S1P47710 185 aa9.18□□□□□ -0.94
SNX1-214ENST00000625244 CD300CQ08708 224 aa9.18□□□□□ -0.94
SNX1-214ENST00000625244 DMRTA1Q5VZB9 504 aa9.18□□□□□ -0.94
SNX1-214ENST00000625244 NEGR1Q7Z3B1 354 aa9.18□□□□□ -0.94
SNX1-214ENST00000625244 STOML3Q8TAV4 291 aa9.18□□□□□ -0.94
SNX1-214ENST00000625244 CIRBP-AS1Q8TBR5 109 aa9.18□□□□□ -0.94
SNX1-214ENST00000625244 RPUSD4Q96CM3 377 aaKnown RBP9.18□□□□□ -0.94
SNX1-214ENST00000625244 FXYD5Q96DB9 178 aa9.18□□□□□ -0.94
SNX1-214ENST00000625244 SAT2Q96F10 170 aaPredicted RBP9.18□□□□□ -0.94
SNX1-214ENST00000625244 C20orf144Q9BQM9 153 aa9.18□□□□□ -0.94
SNX1-214ENST00000625244 TMEM167BQ9NRX6 74 aa9.18□□□□□ -0.94
SNX1-214ENST00000625244 STAG3L2P0CL84 134 aa9.17□□□□□ -0.94
SNX1-214ENST00000625244 STAG3L3P0CL85 134 aa9.17□□□□□ -0.94
SNX1-214ENST00000625244 MRPL23Q16540 153 aaKnown RBP9.17□□□□□ -0.94
SNX1-214ENST00000625244 GFI1BQ5VTD9 330 aa9.17□□□□□ -0.94
SNX1-214ENST00000625244 DPPA3Q6W0C5 159 aa9.17□□□□□ -0.94
SNX1-214ENST00000625244 C9orf62Q8N4C0 152 aa9.17□□□□□ -0.94
SNX1-214ENST00000625244 CMTM2Q8TAZ6 248 aa9.17□□□□□ -0.94
SNX1-214ENST00000625244 MRPL53Q96EL3 112 aaKnown RBP9.17□□□□□ -0.94
SNX1-214ENST00000625244 TRGV1A0A0A0MS02 117 aa9.16□□□□□ -0.94
SNX1-214ENST00000625244 IGHV3-53P01767 116 aa9.16□□□□□ -0.94
SNX1-214ENST00000625244 CRYBA4P53673 196 aa9.16□□□□□ -0.94
SNX1-214ENST00000625244 RANP62826 216 aaKnown RBP9.16□□□□□ -0.94
SNX1-214ENST00000625244 FAM213BQ8TBF2 198 aa9.16□□□□□ -0.94
SNX1-214ENST00000625244 TMED6Q8WW62 240 aa9.16□□□□□ -0.94
SNX1-214ENST00000625244 MAP1LC3B2A6NCE7 125 aa9.15□□□□□ -0.94
SNX1-214ENST00000625244 TEX46H3BTG2 121 aa9.15□□□□□ -0.94
SNX1-214ENST00000625244 EIF3GO75821 320 aaKnown RBP eCLIP9.15□□□□□ -0.94
SNX1-214ENST00000625244 NDUFB4O95168 129 aa9.15□□□□□ -0.94
SNX1-214ENST00000625244 IGLV2-8P01709 118 aa9.15□□□□□ -0.94
SNX1-214ENST00000625244 GCHFRP30047 84 aa9.15□□□□□ -0.94
SNX1-214ENST00000625244 RAB5CP51148 216 aa9.15□□□□□ -0.94
SNX1-214ENST00000625244 EXOC3-AS1Q8N2X6 119 aa9.15□□□□□ -0.94
SNX1-214ENST00000625244 PHYHIPLQ96FC7 376 aa9.15□□□□□ -0.94
SNX1-214ENST00000625244 C8orf49Q96NF6 230 aa9.15□□□□□ -0.94
SNX1-214ENST00000625244 MAP1LC3BQ9GZQ8 125 aa9.15□□□□□ -0.94
SNX1-214ENST00000625244 Q9HAA7 133 aa9.15□□□□□ -0.94
SNX1-214ENST00000625244 GSN-AS1Q9NRJ2 163 aa9.15□□□□□ -0.94
SNX1-214ENST00000625244 PRO0255Q9UI72 69 aa9.15□□□□□ -0.94
SNX1-214ENST00000625244 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.14□□□□□ -0.95
SNX1-214ENST00000625244 RPL37AP61513 92 aaKnown RBP9.14□□□□□ -0.95
SNX1-214ENST00000625244 OTORQ9NRC9 128 aa9.14□□□□□ -0.95
SNX1-214ENST00000625244 HHLA3Q9XRX5 114 aa9.14□□□□□ -0.95
SNX1-214ENST00000625244 IBA57-AS1B1ANH7 110 aa9.13□□□□□ -0.95
SNX1-214ENST00000625244 J3KRW8 73 aa9.13□□□□□ -0.95
SNX1-214ENST00000625244 M0R3E3 92 aa9.13□□□□□ -0.95
SNX1-214ENST00000625244 NKX2-5P52952 324 aaPredicted RBP9.13□□□□□ -0.95
SNX1-214ENST00000625244 C11orf72Q8NBR9 251 aa9.13□□□□□ -0.95
SNX1-214ENST00000625244 SFT2D1Q8WV19 159 aa9.13□□□□□ -0.95
SNX1-214ENST00000625244 TRAV12-3A0A0B4J271 114 aa9.12□□□□□ -0.95
SNX1-214ENST00000625244 PGPA6NDG6 321 aa9.12□□□□□ -0.95
SNX1-214ENST00000625244 K7EQD1 137 aa9.12□□□□□ -0.95
SNX1-214ENST00000625244 LECT2O14960 151 aa9.12□□□□□ -0.95
SNX1-214ENST00000625244 H2AFB1P0C5Y9 115 aa9.12□□□□□ -0.95
SNX1-214ENST00000625244 FGF8P55075 233 aaPredicted RBP9.12□□□□□ -0.95
SNX1-214ENST00000625244 FHL2Q14192 279 aa9.12□□□□□ -0.95
SNX1-214ENST00000625244 ZNF726P1Q15940 193 aa9.12□□□□□ -0.95
SNX1-214ENST00000625244 TMEM78Q5T7P6 136 aa9.12□□□□□ -0.95
SNX1-214ENST00000625244 RPH3ALQ9UNE2 315 aa9.12□□□□□ -0.95
SNX1-214ENST00000625244 K7EQM0 130 aa9.11□□□□□ -0.95
SNX1-214ENST00000625244 SPINK4O60575 86 aa9.11□□□□□ -0.95
SNX1-214ENST00000625244 SLC25A5P05141 298 aaKnown RBP9.11□□□□□ -0.95
SNX1-214ENST00000625244 SRIP30626 198 aa9.11□□□□□ -0.95
SNX1-214ENST00000625244 LEPP41159 167 aa9.11□□□□□ -0.95
SNX1-214ENST00000625244 FHITP49789 147 aa9.11□□□□□ -0.95
SNX1-214ENST00000625244 SULT1A2P50226 295 aa9.11□□□□□ -0.95
SNX1-214ENST00000625244 PPT1P50897 306 aa9.11□□□□□ -0.95
SNX1-214ENST00000625244 ZNF415Q09FC8 603 aa9.11□□□□□ -0.95
SNX1-214ENST00000625244 ARL6IP6Q8N6S5 226 aa9.11□□□□□ -0.95
SNX1-214ENST00000625244 LINC00477Q96M19 166 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms