RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 FOXI2Q6ZQN5 318 aa13.97□□□□□ -0.17
ATXN2-227ENST00000616825 MRPL53Q96EL3 112 aaKnown RBP13.97□□□□□ -0.17
ATXN2-227ENST00000616825 GTSF1LQ9H1H1 148 aa13.97□□□□□ -0.17
ATXN2-227ENST00000616825 COX11Q9Y6N1 276 aa13.97□□□□□ -0.17
ATXN2-227ENST00000616825 EP400Q96L91 3159 aa13.97□□□□□ -0.17
ATXN2-227ENST00000616825 HOXD3P31249 432 aaPredicted RBP13.97□□□□□ -0.17
ATXN2-227ENST00000616825 IL15RAQ13261 267 aa13.97□□□□□ -0.17
ATXN2-227ENST00000616825 OR11H6Q8NGC7 330 aa13.97□□□□□ -0.17
ATXN2-227ENST00000616825 IGLC2P0DOY2 106 aa13.97□□□□□ -0.17
ATXN2-227ENST00000616825 IGLC3P0DOY3 106 aa13.97□□□□□ -0.17
ATXN2-227ENST00000616825 SIP14410 1827 aa13.97□□□□□ -0.17
ATXN2-227ENST00000616825 HELZP42694 1942 aaKnown RBP13.97□□□□□ -0.17
ATXN2-227ENST00000616825 H3BMM0 161 aa13.97□□□□□ -0.17
ATXN2-227ENST00000616825 IGF2BP2-AS1Q96M15 143 aa13.97□□□□□ -0.17
ATXN2-227ENST00000616825 TICRRQ7Z2Z1 1910 aa13.96□□□□□ -0.17
ATXN2-227ENST00000616825 WIPF3A6NGB9 483 aa13.95□□□□□ -0.18
ATXN2-227ENST00000616825 F6UB75 175 aa13.95□□□□□ -0.18
ATXN2-227ENST00000616825 TSSC4Q9Y5U2 329 aaPredicted RBP13.95□□□□□ -0.18
ATXN2-227ENST00000616825 IGHV4-61A0A0C4DH41 118 aa13.95□□□□□ -0.18
ATXN2-227ENST00000616825 IGHV1-24A0A0C4DH33 117 aa13.95□□□□□ -0.18
ATXN2-227ENST00000616825 RHOHQ15669 191 aa13.95□□□□□ -0.18
ATXN2-227ENST00000616825 CCL24O00175 119 aa13.95□□□□□ -0.18
ATXN2-227ENST00000616825 HERVK_113P63121 156 aa13.94□□□□□ -0.18
ATXN2-227ENST00000616825 C17orf77Q96MU5 243 aa13.94□□□□□ -0.18
ATXN2-227ENST00000616825 JMJD1CQ15652 2540 aa13.94□□□□□ -0.18
ATXN2-227ENST00000616825 HLA-DMBP28068 263 aa13.94□□□□□ -0.18
ATXN2-227ENST00000616825 DKK4Q9UBT3 224 aa13.94□□□□□ -0.18
ATXN2-227ENST00000616825 PIEZO2Q9H5I5 2752 aa13.94□□□□□ -0.18
ATXN2-227ENST00000616825 PRSS29PA6NIE9 313 aa13.93□□□□□ -0.18
ATXN2-227ENST00000616825 HOXB4P17483 251 aaPredicted RBP13.93□□□□□ -0.18
ATXN2-227ENST00000616825 DYNAPQ8N1N2 210 aa13.93□□□□□ -0.18
ATXN2-227ENST00000616825 IGF2RP11717 2491 aa13.93□□□□□ -0.18
ATXN2-227ENST00000616825 J3QQQ9 107 aa13.93□□□□□ -0.18
ATXN2-227ENST00000616825 IGLL1P15814 213 aa13.93□□□□□ -0.18
ATXN2-227ENST00000616825 A0A096LPF7 62 aa13.93□□□□□ -0.18
ATXN2-227ENST00000616825 ZNF493Q6ZR52 646 aa13.93□□□□□ -0.18
ATXN2-227ENST00000616825 Q6ZWC4 215 aa13.93□□□□□ -0.18
ATXN2-227ENST00000616825 EREGO14944 169 aa13.92□□□□□ -0.18
ATXN2-227ENST00000616825 CGB3P0DN86 165 aa13.92□□□□□ -0.18
ATXN2-227ENST00000616825 COX8AP10176 69 aa13.92□□□□□ -0.18
ATXN2-227ENST00000616825 MORN5Q5VZ52 161 aa13.92□□□□□ -0.18
ATXN2-227ENST00000616825 IGF2-ASQ6U949 168 aa13.92□□□□□ -0.18
ATXN2-227ENST00000616825 ZFYVE26Q68DK2 2539 aa13.92□□□□□ -0.18
ATXN2-227ENST00000616825 CGB7P0DN87 165 aa13.92□□□□□ -0.18
ATXN2-227ENST00000616825 RNF138Q8WVD3 245 aa13.92□□□□□ -0.18
ATXN2-227ENST00000616825 FGF6P10767 208 aa13.92□□□□□ -0.18
ATXN2-227ENST00000616825 ZMAT4Q9H898 229 aa13.92□□□□□ -0.18
ATXN2-227ENST00000616825 PRO1854Q9UHT4 67 aa13.92□□□□□ -0.18
ATXN2-227ENST00000616825 PLXNA4Q9HCM2 1894 aa13.92□□□□□ -0.18
ATXN2-227ENST00000616825 LHBP01229 141 aa13.91□□□□□ -0.18
ATXN2-227ENST00000616825 U3KQE9 123 aa13.91□□□□□ -0.18
ATXN2-227ENST00000616825 LTAP01374 205 aa13.91□□□□□ -0.18
ATXN2-227ENST00000616825 SPINK8P0C7L1 97 aa13.91□□□□□ -0.18
ATXN2-227ENST00000616825 TCF15Q12870 199 aa13.91□□□□□ -0.18
ATXN2-227ENST00000616825 ETDBQ3ZM63 59 aa13.91□□□□□ -0.18
ATXN2-227ENST00000616825 SCRT2Q9NQ03 307 aa13.91□□□□□ -0.18
ATXN2-227ENST00000616825 GNRH2O43555 120 aa13.91□□□□□ -0.18
ATXN2-227ENST00000616825 DEFB113Q30KQ7 82 aa13.91□□□□□ -0.18
ATXN2-227ENST00000616825 CDPF1Q6NVV7 123 aa13.91□□□□□ -0.18
ATXN2-227ENST00000616825 UBL5Q9BZL1 73 aa13.91□□□□□ -0.18
ATXN2-227ENST00000616825 NOP10Q9NPE3 64 aaKnown RBP13.91□□□□□ -0.18
ATXN2-227ENST00000616825 UBE2WQ96B02 151 aa13.9□□□□□ -0.18
ATXN2-227ENST00000616825 EGR2P11161 476 aaPredicted RBP13.9□□□□□ -0.18
ATXN2-227ENST00000616825 EDA2RQ9HAV5 297 aa13.9□□□□□ -0.18
ATXN2-227ENST00000616825 IGHV7-81A0A0B4J1V7 117 aa13.9□□□□□ -0.18
ATXN2-227ENST00000616825 IGKV1-17P01599 117 aa13.9□□□□□ -0.18
ATXN2-227ENST00000616825 BLCAPP62952 87 aa13.9□□□□□ -0.19
ATXN2-227ENST00000616825 FOXE3Q13461 319 aa13.9□□□□□ -0.19
ATXN2-227ENST00000616825 IGHV4-30-2A0A087WSY4 118 aa13.89□□□□□ -0.19
ATXN2-227ENST00000616825 DEFB136Q30KP8 78 aa13.89□□□□□ -0.19
ATXN2-227ENST00000616825 C10orf91Q5T1B1 145 aa13.89□□□□□ -0.19
ATXN2-227ENST00000616825 RBAKDNA6NC62 111 aa13.89□□□□□ -0.19
ATXN2-227ENST00000616825 TRAV13-2A0A0B4J235 113 aa13.88□□□□□ -0.19
ATXN2-227ENST00000616825 HAMPP81172 84 aa13.88□□□□□ -0.19
ATXN2-227ENST00000616825 SUMO4Q6EEV6 95 aa13.88□□□□□ -0.19
ATXN2-227ENST00000616825 K7EMI3 77 aa13.88□□□□□ -0.19
ATXN2-227ENST00000616825 TRAV25A0A0B4J276 109 aa13.88□□□□□ -0.19
ATXN2-227ENST00000616825 C9orf118A6NHY6 69 aa13.88□□□□□ -0.19
ATXN2-227ENST00000616825 TLN1Q9Y490 2541 aaKnown RBP13.88□□□□□ -0.19
ATXN2-227ENST00000616825 PLXNB1O43157 2135 aa13.87□□□□□ -0.19
ATXN2-227ENST00000616825 RBMY1FQ15415 496 aaKnown RBP13.87□□□□□ -0.19
ATXN2-227ENST00000616825 PPDPFLQ8WWR9 84 aa13.87□□□□□ -0.19
ATXN2-227ENST00000616825 AJUBAQ96IF1 538 aa13.87□□□□□ -0.19
ATXN2-227ENST00000616825 FGF23Q9GZV9 251 aaPredicted RBP13.87□□□□□ -0.19
ATXN2-227ENST00000616825 ZSWIM8A7E2V4 1837 aa13.87□□□□□ -0.19
ATXN2-227ENST00000616825 A0A0J9YY99 117 aa13.87□□□□□ -0.19
ATXN2-227ENST00000616825 K7EIM0 57 aa13.87□□□□□ -0.19
ATXN2-227ENST00000616825 TAL2Q16559 108 aa13.87□□□□□ -0.19
ATXN2-227ENST00000616825 IGHV4-38-2P0DP08 117 aa13.86□□□□□ -0.19
ATXN2-227ENST00000616825 RNASE13Q5GAN3 156 aaKnown RBP13.86□□□□□ -0.19
ATXN2-227ENST00000616825 CLPSL2Q6UWE3 100 aa13.86□□□□□ -0.19
ATXN2-227ENST00000616825 ASPHD1Q5U4P2 390 aa13.86□□□□□ -0.19
ATXN2-227ENST00000616825 CRLF1O75462 422 aa13.85□□□□□ -0.19
ATXN2-227ENST00000616825 PIFOQ8TCI5 191 aa13.85□□□□□ -0.19
ATXN2-227ENST00000616825 IGKV2D-24A0A075B6R9 120 aa13.85□□□□□ -0.19
ATXN2-227ENST00000616825 XCL1P47992 114 aa13.85□□□□□ -0.19
ATXN2-227ENST00000616825 NPBQ8NG41 125 aa13.85□□□□□ -0.19
ATXN2-227ENST00000616825 IGLV11-55A0A075B6I3 123 aa13.85□□□□□ -0.19
ATXN2-227ENST00000616825 CTSGP08311 255 aa13.85□□□□□ -0.19
ATXN2-227ENST00000616825 SPRNQ5BIV9 151 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms