RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 H3BMM0 161 aa16.01■□□□□ 0.15
USP6NL-204ENST00000606752 APCSP02743 223 aa16.01■□□□□ 0.15
USP6NL-204ENST00000606752 AMTNQ6UX39 209 aa16.01■□□□□ 0.15
USP6NL-204ENST00000606752 A8MTW9 85 aa16■□□□□ 0.15
USP6NL-204ENST00000606752 F2Z2F3 143 aa16■□□□□ 0.15
USP6NL-204ENST00000606752 S100A8P05109 93 aa16■□□□□ 0.15
USP6NL-204ENST00000606752 CDKN1BP46527 198 aa16■□□□□ 0.15
USP6NL-204ENST00000606752 C7orf71A4D174 169 aa15.99■□□□□ 0.15
USP6NL-204ENST00000606752 NAGKQ9UJ70 344 aa15.99■□□□□ 0.15
USP6NL-204ENST00000606752 SLAQ13239 276 aa15.98■□□□□ 0.15
USP6NL-204ENST00000606752 ZNF124Q15973 351 aa15.98■□□□□ 0.15
USP6NL-204ENST00000606752 ODF3L2Q3SX64 289 aa15.98■□□□□ 0.15
USP6NL-204ENST00000606752 SSBP4Q9BWG4 385 aaPredicted RBP15.98■□□□□ 0.15
USP6NL-204ENST00000606752 AGRNO00468 2067 aa15.98■□□□□ 0.15
USP6NL-204ENST00000606752 M0R2Z0 102 aa15.98■□□□□ 0.15
USP6NL-204ENST00000606752 CMC4P56277 68 aaPredicted RBP15.98■□□□□ 0.15
USP6NL-204ENST00000606752 SPINK13Q1W4C9 94 aa15.98■□□□□ 0.15
USP6NL-204ENST00000606752 CNFNQ9BYD5 112 aa15.98■□□□□ 0.15
USP6NL-204ENST00000606752 ZNF324O75467 553 aaPredicted RBP15.97■□□□□ 0.15
USP6NL-204ENST00000606752 KIAA1644Q3SXP7 199 aa15.97■□□□□ 0.15
USP6NL-204ENST00000606752 ANXA2RQ3ZCQ2 193 aa15.97■□□□□ 0.15
USP6NL-204ENST00000606752 UBE2CO00762 179 aa15.96■□□□□ 0.15
USP6NL-204ENST00000606752 HOXA5P20719 270 aa15.96■□□□□ 0.15
USP6NL-204ENST00000606752 MUC21Q5SSG8 566 aa15.96■□□□□ 0.15
USP6NL-204ENST00000606752 GFI1BQ5VTD9 330 aa15.96■□□□□ 0.15
USP6NL-204ENST00000606752 GATD1Q8NB37 220 aa15.96■□□□□ 0.15
USP6NL-204ENST00000606752 TRAV12-3A0A0B4J271 114 aa15.96■□□□□ 0.14
USP6NL-204ENST00000606752 MUC21A0A0G2JKD1 596 aa15.96■□□□□ 0.14
USP6NL-204ENST00000606752 MUC21A0A140T8X8 626 aa15.96■□□□□ 0.14
USP6NL-204ENST00000606752 OR11H12B2RN74 326 aa15.96■□□□□ 0.14
USP6NL-204ENST00000606752 TEP1Q99973 2627 aaKnown RBP15.95■□□□□ 0.14
USP6NL-204ENST00000606752 TRAV12-2A0A075B6T6 113 aa15.95■□□□□ 0.14
USP6NL-204ENST00000606752 NTF3P20783 257 aa15.95■□□□□ 0.14
USP6NL-204ENST00000606752 SSTP61278 116 aa15.95■□□□□ 0.14
USP6NL-204ENST00000606752 KRTAP24-1Q3LI83 254 aa15.95■□□□□ 0.14
USP6NL-204ENST00000606752 COA6Q5JTJ3 125 aaKnown RBP15.95■□□□□ 0.14
USP6NL-204ENST00000606752 OR5AL1P0C617 328 aa15.94■□□□□ 0.14
USP6NL-204ENST00000606752 FAM159AQ6UWV7 190 aa15.94■□□□□ 0.14
USP6NL-204ENST00000606752 ZNF493Q6ZR52 646 aa15.94■□□□□ 0.14
USP6NL-204ENST00000606752 CLUHP3Q96NS8 147 aa15.94■□□□□ 0.14
USP6NL-204ENST00000606752 SNAI2O43623 268 aa15.94■□□□□ 0.14
USP6NL-204ENST00000606752 TWIST1Q15672 202 aa15.94■□□□□ 0.14
USP6NL-204ENST00000606752 BEAN1Q3B7T3 259 aa15.94■□□□□ 0.14
USP6NL-204ENST00000606752 KCNS1Q96KK3 526 aa15.94■□□□□ 0.14
USP6NL-204ENST00000606752 RBMY1BA6NDE4 496 aaKnown RBP15.93■□□□□ 0.14
USP6NL-204ENST00000606752 RBMY1EA6NEQ0 496 aaKnown RBP15.93■□□□□ 0.14
USP6NL-204ENST00000606752 RBMY1DP0C7P1 496 aaKnown RBP15.93■□□□□ 0.14
USP6NL-204ENST00000606752 ASIPP42127 132 aa15.93■□□□□ 0.14
USP6NL-204ENST00000606752 FAM110AQ9BQ89 295 aa15.93■□□□□ 0.14
USP6NL-204ENST00000606752 ATRQ13535 2644 aa15.93■□□□□ 0.14
USP6NL-204ENST00000606752 INSL3P51460 131 aa15.92■□□□□ 0.14
USP6NL-204ENST00000606752 DNLZQ5SXM8 178 aa15.92■□□□□ 0.14
USP6NL-204ENST00000606752 GNRH2O43555 120 aa15.91■□□□□ 0.14
USP6NL-204ENST00000606752 S100A4P26447 101 aaKnown RBP15.91■□□□□ 0.14
USP6NL-204ENST00000606752 SRIP30626 198 aa15.91■□□□□ 0.14
USP6NL-204ENST00000606752 TDRG1Q3Y452 100 aa15.91■□□□□ 0.14
USP6NL-204ENST00000606752 H3BVH4 76 aa15.91■□□□□ 0.14
USP6NL-204ENST00000606752 MED14OSP0DP75 135 aa15.91■□□□□ 0.14
USP6NL-204ENST00000606752 FXYD7P58549 80 aa15.91■□□□□ 0.14
USP6NL-204ENST00000606752 PRR31Q5SQ13 230 aa15.91■□□□□ 0.14
USP6NL-204ENST00000606752 STHQ8IWL8 128 aa15.91■□□□□ 0.14
USP6NL-204ENST00000606752 CRXO43186 299 aaPredicted RBP15.9■□□□□ 0.14
USP6NL-204ENST00000606752 Q0VG73 95 aa15.9■□□□□ 0.14
USP6NL-204ENST00000606752 OR10AG1Q8NH19 301 aa15.9■□□□□ 0.14
USP6NL-204ENST00000606752 MSRB1Q9NZV6 116 aa15.9■□□□□ 0.14
USP6NL-204ENST00000606752 IGHV4-4A0A075B6R2 117 aa15.89■□□□□ 0.13
USP6NL-204ENST00000606752 LOC102724200A0A096LPH7 203 aaPredicted RBP15.89■□□□□ 0.13
USP6NL-204ENST00000606752 CD7P09564 240 aa15.89■□□□□ 0.13
USP6NL-204ENST00000606752 CACNG7P62955 275 aa15.89■□□□□ 0.13
USP6NL-204ENST00000606752 C9orf66Q5T8R8 295 aa15.89■□□□□ 0.13
USP6NL-204ENST00000606752 TENM1Q9UKZ4 2725 aa15.89■□□□□ 0.13
USP6NL-204ENST00000606752 OR10J3Q5JRS4 329 aa15.89■□□□□ 0.13
USP6NL-204ENST00000606752 ALKBH7Q9BT30 221 aaPredicted RBP15.89■□□□□ 0.13
USP6NL-204ENST00000606752 SPANXN1Q5VSR9 72 aa15.88■□□□□ 0.13
USP6NL-204ENST00000606752 PRIMA1Q86XR5 153 aa15.88■□□□□ 0.13
USP6NL-204ENST00000606752 HIST3H2BBQ8N257 126 aa15.88■□□□□ 0.13
USP6NL-204ENST00000606752 TMEM191AQ9H0A3 160 aa15.88■□□□□ 0.13
USP6NL-204ENST00000606752 SCRT2Q9NQ03 307 aa15.88■□□□□ 0.13
USP6NL-204ENST00000606752 TIMM8BQ9Y5J9 83 aaPredicted RBP15.88■□□□□ 0.13
USP6NL-204ENST00000606752 IGHV1OR15-1A0A075B7D0 117 aa15.87■□□□□ 0.13
USP6NL-204ENST00000606752 RNASE3P12724 160 aaKnown RBP15.87■□□□□ 0.13
USP6NL-204ENST00000606752 FAM104BQ5XKR9 115 aa15.87■□□□□ 0.13
USP6NL-204ENST00000606752 TRPT1Q86TN4 253 aaKnown RBP15.87■□□□□ 0.13
USP6NL-204ENST00000606752 SPATA3Q8NHX4 192 aa15.87■□□□□ 0.13
USP6NL-204ENST00000606752 C19orf73Q9NVV2 129 aa15.87■□□□□ 0.13
USP6NL-204ENST00000606752 ZNF747Q9BV97 191 aa15.87■□□□□ 0.13
USP6NL-204ENST00000606752 BAGE3Q86Y29 109 aa15.86■□□□□ 0.13
USP6NL-204ENST00000606752 TP53TG3Q9ULZ0 132 aa15.86■□□□□ 0.13
USP6NL-204ENST00000606752 AMBPP02760 352 aa15.85■□□□□ 0.13
USP6NL-204ENST00000606752 RBMY1A1P0DJD3 496 aaKnown RBP15.85■□□□□ 0.13
USP6NL-204ENST00000606752 RBMY1CP0DJD4 496 aa15.85■□□□□ 0.13
USP6NL-204ENST00000606752 RBMY1FQ15415 496 aaKnown RBP15.85■□□□□ 0.13
USP6NL-204ENST00000606752 PDZD11Q5EBL8 140 aa15.85■□□□□ 0.13
USP6NL-204ENST00000606752 AMN1Q8IY45 258 aa15.85■□□□□ 0.13
USP6NL-204ENST00000606752 TMEM256Q8N2U0 113 aa15.85■□□□□ 0.13
USP6NL-204ENST00000606752 WFDC9Q8NEX5 89 aa15.85■□□□□ 0.13
USP6NL-204ENST00000606752 PHLDA3Q9Y5J5 127 aa15.85■□□□□ 0.13
USP6NL-204ENST00000606752 IFITM10A6NMD0 228 aa15.84■□□□□ 0.13
USP6NL-204ENST00000606752 DMRTA1Q5VZB9 504 aa15.84■□□□□ 0.13
USP6NL-204ENST00000606752 C18orf32Q8TCD1 76 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms