RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 TMEM14CQ9P0S9 112 aa7.69□□□□□ -1.18
CSMD1-217ENST00000602723 MDS2Q8NDY4 140 aa7.69□□□□□ -1.18
CSMD1-217ENST00000602723 TAL2Q16559 108 aa7.69□□□□□ -1.18
CSMD1-217ENST00000602723 SPANXCQ9NY87 97 aa7.69□□□□□ -1.18
CSMD1-217ENST00000602723 HERVK_113P63121 156 aa7.69□□□□□ -1.18
CSMD1-217ENST00000602723 ANKRD11Q6UB99 2663 aaPredicted RBP7.69□□□□□ -1.18
CSMD1-217ENST00000602723 NXPH4O95158 308 aa7.69□□□□□ -1.18
CSMD1-217ENST00000602723 IGHV2-5P01817 119 aa7.69□□□□□ -1.18
CSMD1-217ENST00000602723 ZNRD1Q9P1U0 126 aa7.69□□□□□ -1.18
CSMD1-217ENST00000602723 GAGE6Q13070 117 aa7.69□□□□□ -1.18
CSMD1-217ENST00000602723 COL8A2P25067 703 aa7.69□□□□□ -1.18
CSMD1-217ENST00000602723 FAM110DQ8TAY7 271 aaPredicted RBP7.69□□□□□ -1.18
CSMD1-217ENST00000602723 ZNF833PQ6ZTB9 187 aa7.68□□□□□ -1.18
CSMD1-217ENST00000602723 NBL1P41271 181 aa7.68□□□□□ -1.18
CSMD1-217ENST00000602723 TRAV12-2A0A075B6T6 113 aa7.68□□□□□ -1.18
CSMD1-217ENST00000602723 B3GALT5-AS1P59052 145 aa7.68□□□□□ -1.18
CSMD1-217ENST00000602723 RAI1Q7Z5J4 1906 aaPredicted RBP7.68□□□□□ -1.18
CSMD1-217ENST00000602723 IGHV3-38A0A0C4DH36 116 aa7.68□□□□□ -1.18
CSMD1-217ENST00000602723 NDUFS7O75251 213 aa7.68□□□□□ -1.18
CSMD1-217ENST00000602723 AMTNQ6UX39 209 aa7.68□□□□□ -1.18
CSMD1-217ENST00000602723 PRR25Q96S07 402 aa7.68□□□□□ -1.18
CSMD1-217ENST00000602723 TEX36Q5VZQ5 186 aa7.68□□□□□ -1.18
CSMD1-217ENST00000602723 C15orf53Q8NAA6 179 aa7.68□□□□□ -1.18
CSMD1-217ENST00000602723 SIVA1O15304 175 aa7.67□□□□□ -1.18
CSMD1-217ENST00000602723 NDUFS5O43920 106 aa7.67□□□□□ -1.18
CSMD1-217ENST00000602723 VWC2Q2TAL6 325 aa7.67□□□□□ -1.18
CSMD1-217ENST00000602723 GATA4P43694 442 aa7.67□□□□□ -1.18
CSMD1-217ENST00000602723 BPESC1Q9GZL8 116 aa7.67□□□□□ -1.18
CSMD1-217ENST00000602723 RS1O15537 224 aa7.67□□□□□ -1.18
CSMD1-217ENST00000602723 RUSC1-AS1Q66K80 236 aa7.67□□□□□ -1.18
CSMD1-217ENST00000602723 CRYBA4P53673 196 aa7.67□□□□□ -1.18
CSMD1-217ENST00000602723 RNASE13Q5GAN3 156 aaKnown RBP7.67□□□□□ -1.18
CSMD1-217ENST00000602723 LINC01619G3V211 115 aa7.67□□□□□ -1.18
CSMD1-217ENST00000602723 MBD3L4A6NDZ8 208 aaPredicted RBP7.66□□□□□ -1.18
CSMD1-217ENST00000602723 MBD3L3A6NE82 208 aaPredicted RBP7.66□□□□□ -1.18
CSMD1-217ENST00000602723 MBD3L5A6NJ08 208 aaPredicted RBP7.66□□□□□ -1.18
CSMD1-217ENST00000602723 H3BRN7 92 aa7.66□□□□□ -1.18
CSMD1-217ENST00000602723 MBD3L2Q8NHZ7 208 aaPredicted RBP7.66□□□□□ -1.18
CSMD1-217ENST00000602723 C20orf78Q9BR46 151 aa7.66□□□□□ -1.18
CSMD1-217ENST00000602723 PYGO2Q9BRQ0 406 aa7.66□□□□□ -1.18
CSMD1-217ENST00000602723 UBE2E1P51965 193 aa7.66□□□□□ -1.18
CSMD1-217ENST00000602723 USP9YO00507 2555 aaPredicted RBP7.66□□□□□ -1.18
CSMD1-217ENST00000602723 NPYP01303 97 aa7.66□□□□□ -1.18
CSMD1-217ENST00000602723 CLPSL2Q6UWE3 100 aa7.66□□□□□ -1.18
CSMD1-217ENST00000602723 C12orf74Q32Q52 190 aa7.66□□□□□ -1.18
CSMD1-217ENST00000602723 PRB1P04280 392 aa7.66□□□□□ -1.18
CSMD1-217ENST00000602723 CD59P13987 128 aa7.66□□□□□ -1.18
CSMD1-217ENST00000602723 GATA3P23771 443 aa7.66□□□□□ -1.18
CSMD1-217ENST00000602723 RHOHQ15669 191 aa7.66□□□□□ -1.18
CSMD1-217ENST00000602723 ZNF726P1Q15940 193 aa7.66□□□□□ -1.18
CSMD1-217ENST00000602723 FXYD5Q96DB9 178 aa7.66□□□□□ -1.18
CSMD1-217ENST00000602723 PTPRSQ13332 1948 aa7.65□□□□□ -1.18
CSMD1-217ENST00000602723 ASPHD1Q5U4P2 390 aa7.65□□□□□ -1.18
CSMD1-217ENST00000602723 ORMDL1Q9P0S3 153 aa7.65□□□□□ -1.18
CSMD1-217ENST00000602723 ZNF493Q6ZR52 646 aa7.65□□□□□ -1.18
CSMD1-217ENST00000602723 ZNRF2Q8NHG8 242 aa7.65□□□□□ -1.18
CSMD1-217ENST00000602723 Q8TCH9 128 aa7.65□□□□□ -1.18
CSMD1-217ENST00000602723 RMI2Q96E14 147 aa7.65□□□□□ -1.18
CSMD1-217ENST00000602723 E7EQL1 145 aa7.65□□□□□ -1.18
CSMD1-217ENST00000602723 G3V318 75 aa7.65□□□□□ -1.18
CSMD1-217ENST00000602723 NDUFA4O00483 81 aa7.65□□□□□ -1.18
CSMD1-217ENST00000602723 CPAMD8Q8IZJ3 1885 aa7.65□□□□□ -1.18
CSMD1-217ENST00000602723 CCL25O15444 150 aa7.65□□□□□ -1.18
CSMD1-217ENST00000602723 SS18L2Q9UHA2 77 aa7.65□□□□□ -1.18
CSMD1-217ENST00000602723 ANXA2RQ3ZCQ2 193 aa7.65□□□□□ -1.18
CSMD1-217ENST00000602723 DKK2Q9UBU2 259 aa7.65□□□□□ -1.18
CSMD1-217ENST00000602723 CRYGCP07315 174 aa7.65□□□□□ -1.18
CSMD1-217ENST00000602723 WIPF3A6NGB9 483 aa7.65□□□□□ -1.19
CSMD1-217ENST00000602723 APOC4P55056 127 aa7.65□□□□□ -1.19
CSMD1-217ENST00000602723 C5orf47Q569G3 176 aa7.65□□□□□ -1.19
CSMD1-217ENST00000602723 CGB3P0DN86 165 aa7.65□□□□□ -1.19
CSMD1-217ENST00000602723 ANGP03950 147 aaKnown RBP7.65□□□□□ -1.19
CSMD1-217ENST00000602723 B5MCH6 92 aa7.64□□□□□ -1.19
CSMD1-217ENST00000602723 C3orf56Q8N813 242 aa7.64□□□□□ -1.19
CSMD1-217ENST00000602723 THSD7BQ9C0I4 1608 aa7.64□□□□□ -1.19
CSMD1-217ENST00000602723 LTAP01374 205 aa7.64□□□□□ -1.19
CSMD1-217ENST00000602723 BAALC-AS2P0C853 105 aa7.64□□□□□ -1.19
CSMD1-217ENST00000602723 LINC01545Q5VT33 79 aa7.64□□□□□ -1.19
CSMD1-217ENST00000602723 CLPSL1A2RUU4 121 aa7.64□□□□□ -1.19
CSMD1-217ENST00000602723 IGHG2P01859 326 aa7.64□□□□□ -1.19
CSMD1-217ENST00000602723 FOXL2NBQ6ZUU3 175 aa7.64□□□□□ -1.19
CSMD1-217ENST00000602723 MTORP42345 2549 aa7.64□□□□□ -1.19
CSMD1-217ENST00000602723 MSMBP08118 114 aa7.64□□□□□ -1.19
CSMD1-217ENST00000602723 LRP4O75096 1905 aa7.64□□□□□ -1.19
CSMD1-217ENST00000602723 IGHV2-70DA0A0C4DH43 119 aa7.64□□□□□ -1.19
CSMD1-217ENST00000602723 XCL1P47992 114 aa7.63□□□□□ -1.19
CSMD1-217ENST00000602723 WT1-ASQ06250 92 aa7.63□□□□□ -1.19
CSMD1-217ENST00000602723 GNLYP22749 145 aa7.63□□□□□ -1.19
CSMD1-217ENST00000602723 CGB7P0DN87 165 aa7.63□□□□□ -1.19
CSMD1-217ENST00000602723 LMO1P25800 156 aa7.63□□□□□ -1.19
CSMD1-217ENST00000602723 WIPF2Q8TF74 440 aaPredicted RBP7.63□□□□□ -1.19
CSMD1-217ENST00000602723 PRSS47A8MTI9 375 aa7.63□□□□□ -1.19
CSMD1-217ENST00000602723 K7EMI3 77 aa7.63□□□□□ -1.19
CSMD1-217ENST00000602723 IGHV1-69DA0A0B4J2H0 117 aa7.63□□□□□ -1.19
CSMD1-217ENST00000602723 IGHV1-69P01742 117 aa7.63□□□□□ -1.19
CSMD1-217ENST00000602723 FHL1Q13642 323 aa7.63□□□□□ -1.19
CSMD1-217ENST00000602723 PCP2Q8IVA1 136 aa7.63□□□□□ -1.19
CSMD1-217ENST00000602723 C11orf52Q96A22 123 aa7.63□□□□□ -1.19
CSMD1-217ENST00000602723 ANKRD17O75179 2603 aaKnown RBP7.63□□□□□ -1.19
CSMD1-217ENST00000602723 SLC25A29Q8N8R3 303 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms