RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 IGHV3-16A0A0C4DH30 117 aa11.94□□□□□ -0.5
HERC3-214ENST00000601319 KANTRA0A1W2PQU2 76 aa11.94□□□□□ -0.5
HERC3-214ENST00000601319 FAM74A7A6NL05 159 aa11.94□□□□□ -0.5
HERC3-214ENST00000601319 UMAD1C9J7I0 102 aa11.94□□□□□ -0.5
HERC3-214ENST00000601319 M0R2N4 97 aa11.94□□□□□ -0.5
HERC3-214ENST00000601319 FGF8P55075 233 aaPredicted RBP11.94□□□□□ -0.5
HERC3-214ENST00000601319 SAPCD1Q5SSQ6 148 aa11.94□□□□□ -0.5
HERC3-214ENST00000601319 TCEAL7Q9BRU2 100 aa11.94□□□□□ -0.5
HERC3-214ENST00000601319 SDF2L1Q9HCN8 221 aa11.94□□□□□ -0.5
HERC3-214ENST00000601319 ARL2-SNX15V9GYD0 113 aa11.94□□□□□ -0.5
HERC3-214ENST00000601319 FAT2Q9NYQ8 4349 aa11.93□□□□□ -0.5
HERC3-214ENST00000601319 PEX7O00628 323 aa11.93□□□□□ -0.5
HERC3-214ENST00000601319 TYMSP04818 313 aa11.93□□□□□ -0.5
HERC3-214ENST00000601319 PFN1P07737 140 aaKnown RBP11.93□□□□□ -0.5
HERC3-214ENST00000601319 PPT1P50897 306 aa11.93□□□□□ -0.5
HERC3-214ENST00000601319 ZNF80P51504 273 aaPredicted RBP11.93□□□□□ -0.5
HERC3-214ENST00000601319 UBE2G2P60604 165 aa11.93□□□□□ -0.5
HERC3-214ENST00000601319 SLAQ13239 276 aa11.93□□□□□ -0.5
HERC3-214ENST00000601319 SMUG1Q53HV7 270 aa11.93□□□□□ -0.5
HERC3-214ENST00000601319 STOML3Q8TAV4 291 aa11.93□□□□□ -0.5
HERC3-214ENST00000601319 HIST1H2BAQ96A08 127 aa11.93□□□□□ -0.5
HERC3-214ENST00000601319 C8orf49Q96NF6 230 aa11.93□□□□□ -0.5
HERC3-214ENST00000601319 PRO0255Q9UI72 69 aa11.93□□□□□ -0.5
HERC3-214ENST00000601319 A0A096LPF7 62 aa11.92□□□□□ -0.5
HERC3-214ENST00000601319 RTL8CO15255 209 aa11.92□□□□□ -0.5
HERC3-214ENST00000601319 GCGP01275 180 aa11.92□□□□□ -0.5
HERC3-214ENST00000601319 IFNA7P01567 189 aa11.92□□□□□ -0.5
HERC3-214ENST00000601319 FHITP49789 147 aa11.92□□□□□ -0.5
HERC3-214ENST00000601319 EIF5AP63241 154 aaKnown RBP11.92□□□□□ -0.5
HERC3-214ENST00000601319 DPPA3Q6W0C5 159 aa11.92□□□□□ -0.5
HERC3-214ENST00000601319 PRNTQ86SH4 94 aa11.92□□□□□ -0.5
HERC3-214ENST00000601319 UPK3BQ9BT76 320 aa11.92□□□□□ -0.5
HERC3-214ENST00000601319 ZNF471Q9BX82 626 aaPredicted RBP11.92□□□□□ -0.5
HERC3-214ENST00000601319 DNAH17Q9UFH2 4485 aa11.91□□□□□ -0.5
HERC3-214ENST00000601319 M0R2P5 195 aa11.91□□□□□ -0.5
HERC3-214ENST00000601319 GNRH2O43555 120 aa11.91□□□□□ -0.5
HERC3-214ENST00000601319 FHL2Q14192 279 aa11.91□□□□□ -0.5
HERC3-214ENST00000601319 Q86TA4 180 aa11.91□□□□□ -0.5
HERC3-214ENST00000601319 NBDYA0A0U1RRE5 68 aa11.9□□□□□ -0.5
HERC3-214ENST00000601319 IGHV3-53P01767 116 aa11.9□□□□□ -0.5
HERC3-214ENST00000601319 CRYBA4P53673 196 aa11.9□□□□□ -0.5
HERC3-214ENST00000601319 SOHLH1Q5JUK2 328 aa11.9□□□□□ -0.5
HERC3-214ENST00000601319 TCTE3Q8IZS6 198 aa11.9□□□□□ -0.5
HERC3-214ENST00000601319 MBD3L1Q8WWY6 194 aa11.9□□□□□ -0.5
HERC3-214ENST00000601319 C11orf21Q9P2W6 132 aa11.9□□□□□ -0.5
HERC3-214ENST00000601319 MRPS16Q9Y3D3 137 aaKnown RBP11.9□□□□□ -0.5
HERC3-214ENST00000601319 TRAV4A0A0B4J268 109 aa11.89□□□□□ -0.51
HERC3-214ENST00000601319 PAX4O43316 350 aa11.89□□□□□ -0.51
HERC3-214ENST00000601319 PFDN1O60925 122 aa11.89□□□□□ -0.51
HERC3-214ENST00000601319 TPT1P13693 172 aaKnown RBP11.89□□□□□ -0.51
HERC3-214ENST00000601319 ESRGQ1W209 222 aa11.89□□□□□ -0.51
HERC3-214ENST00000601319 TMUB2Q71RG4 321 aa11.89□□□□□ -0.51
HERC3-214ENST00000601319 COX8CQ7Z4L0 72 aa11.89□□□□□ -0.51
HERC3-214ENST00000601319 FAM213BQ8TBF2 198 aa11.89□□□□□ -0.51
HERC3-214ENST00000601319 LINC00479Q96M42 142 aa11.89□□□□□ -0.51
HERC3-214ENST00000601319 HHLA3Q9XRX5 114 aa11.89□□□□□ -0.51
HERC3-214ENST00000601319 ICOSQ9Y6W8 199 aa11.89□□□□□ -0.51
HERC3-214ENST00000601319 TRAV34A0A0B4J273 112 aa11.88□□□□□ -0.51
HERC3-214ENST00000601319 TRBV6-1A0A0K0K1D8 114 aa11.88□□□□□ -0.51
HERC3-214ENST00000601319 FMC1Q96HJ9 113 aa11.88□□□□□ -0.51
HERC3-214ENST00000601319 ZNF479Q96JC4 524 aa11.88□□□□□ -0.51
HERC3-214ENST00000601319 C9orf85Q96MD7 179 aa11.88□□□□□ -0.51
HERC3-214ENST00000601319 TRGV4A0A0C4DH28 118 aa11.87□□□□□ -0.51
HERC3-214ENST00000601319 A0A1B0GVY2 172 aa11.87□□□□□ -0.51
HERC3-214ENST00000601319 PRSS29PA6NIE9 313 aa11.87□□□□□ -0.51
HERC3-214ENST00000601319 LGALSLQ3ZCW2 172 aaPredicted RBP11.87□□□□□ -0.51
HERC3-214ENST00000601319 C1orf134Q5TEV5 83 aa11.87□□□□□ -0.51
HERC3-214ENST00000601319 Q6ZNX1 250 aa11.87□□□□□ -0.51
HERC3-214ENST00000601319 SFT2D1Q8WV19 159 aa11.87□□□□□ -0.51
HERC3-214ENST00000601319 PTH2Q96A98 100 aa11.87□□□□□ -0.51
HERC3-214ENST00000601319 ZFP30Q9Y2G7 519 aa11.87□□□□□ -0.51
HERC3-214ENST00000601319 PKHD1P08F94 4074 aa11.87□□□□□ -0.51
HERC3-214ENST00000601319 PKD1P98161 4303 aa11.86□□□□□ -0.51
HERC3-214ENST00000601319 SFTA3P0C7M3 94 aa11.86□□□□□ -0.51
HERC3-214ENST00000601319 TTC32Q5I0X7 151 aa11.86□□□□□ -0.51
HERC3-214ENST00000601319 Q9H8V8 135 aa11.86□□□□□ -0.51
HERC3-214ENST00000601319 FABP5P3A8MUU1 101 aa11.85□□□□□ -0.51
HERC3-214ENST00000601319 UBE2G1P62253 170 aa11.85□□□□□ -0.51
HERC3-214ENST00000601319 MRPL23Q16540 153 aaKnown RBP11.85□□□□□ -0.51
HERC3-214ENST00000601319 CST9LP1Q5W188 147 aa11.85□□□□□ -0.51
HERC3-214ENST00000601319 OR4C5Q8NGB2 326 aa11.85□□□□□ -0.51
HERC3-214ENST00000601319 A0A1W2PPQ1 181 aa11.84□□□□□ -0.51
HERC3-214ENST00000601319 CIDEAO60543 219 aa11.84□□□□□ -0.51
HERC3-214ENST00000601319 PAGE4O60829 102 aa11.84□□□□□ -0.51
HERC3-214ENST00000601319 LTAP01374 205 aa11.84□□□□□ -0.51
HERC3-214ENST00000601319 C1QBP02746 253 aa11.84□□□□□ -0.51
HERC3-214ENST00000601319 ORM1P02763 201 aa11.84□□□□□ -0.51
HERC3-214ENST00000601319 H2AFB1P0C5Y9 115 aa11.84□□□□□ -0.51
HERC3-214ENST00000601319 RNASE3P12724 160 aaKnown RBP11.84□□□□□ -0.51
HERC3-214ENST00000601319 ZNF876PQ49A33 203 aa11.84□□□□□ -0.51
HERC3-214ENST00000601319 EIF5AL1Q6IS14 154 aaKnown RBP11.84□□□□□ -0.51
HERC3-214ENST00000601319 ZC2HC1AQ96GY0 325 aa11.84□□□□□ -0.51
HERC3-214ENST00000601319 IGKV3D-20A0A0C4DH25 116 aa11.83□□□□□ -0.52
HERC3-214ENST00000601319 C9JCJ5 164 aa11.83□□□□□ -0.52
HERC3-214ENST00000601319 AKR1C3P42330 323 aa11.83□□□□□ -0.52
HERC3-214ENST00000601319 RAB5CP51148 216 aa11.83□□□□□ -0.52
HERC3-214ENST00000601319 PIK3CD-AS1Q5SR53 167 aa11.83□□□□□ -0.52
HERC3-214ENST00000601319 C6orf223Q8N319 242 aa11.83□□□□□ -0.52
HERC3-214ENST00000601319 TRAV1-1A0A0B4J248 108 aa11.82□□□□□ -0.52
HERC3-214ENST00000601319 K7EQD1 137 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms