RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 TIMM8BQ9Y5J9 83 aaPredicted RBP15.85■□□□□ 0.13
CHMP2A-204ENST00000597848 STAB2Q8WWQ8 2551 aa15.85■□□□□ 0.13
CHMP2A-204ENST00000597848 TRBV20OR9-2A0A075B6H5 130 aa15.84■□□□□ 0.13
CHMP2A-204ENST00000597848 TRGV11A0A075B6L2 103 aa15.84■□□□□ 0.13
CHMP2A-204ENST00000597848 PLAC8L1A1L4L8 177 aa15.84■□□□□ 0.13
CHMP2A-204ENST00000597848 PGPEP1LA6NFU8 196 aa15.84■□□□□ 0.13
CHMP2A-204ENST00000597848 GNRH2O43555 120 aa15.84■□□□□ 0.13
CHMP2A-204ENST00000597848 TDRG1Q3Y452 100 aa15.84■□□□□ 0.13
CHMP2A-204ENST00000597848 SMDT1Q9H4I9 107 aa15.84■□□□□ 0.13
CHMP2A-204ENST00000597848 NOP10Q9NPE3 64 aaKnown RBP15.84■□□□□ 0.13
CHMP2A-204ENST00000597848 CELA1Q9UNI1 258 aa15.84■□□□□ 0.13
CHMP2A-204ENST00000597848 C9JQL5 133 aa15.83■□□□□ 0.12
CHMP2A-204ENST00000597848 IGLV2-8P01709 118 aa15.83■□□□□ 0.12
CHMP2A-204ENST00000597848 NANOS2P60321 138 aaKnown RBP15.83■□□□□ 0.12
CHMP2A-204ENST00000597848 SMIM12Q96EX1 92 aa15.83■□□□□ 0.12
CHMP2A-204ENST00000597848 SMIM7Q9BQ49 75 aa15.83■□□□□ 0.12
CHMP2A-204ENST00000597848 DKK2Q9UBU2 259 aa15.83■□□□□ 0.12
CHMP2A-204ENST00000597848 C9JCJ5 164 aa15.82■□□□□ 0.12
CHMP2A-204ENST00000597848 M0R036 132 aa15.82■□□□□ 0.12
CHMP2A-204ENST00000597848 ZNF415Q09FC8 603 aa15.82■□□□□ 0.12
CHMP2A-204ENST00000597848 C11orf72Q8NBR9 251 aa15.82■□□□□ 0.12
CHMP2A-204ENST00000597848 TEX48A0A1B0GUV7 120 aa15.81■□□□□ 0.12
CHMP2A-204ENST00000597848 ZNF727A8MUV8 499 aa15.81■□□□□ 0.12
CHMP2A-204ENST00000597848 B4DEV8 164 aa15.81■□□□□ 0.12
CHMP2A-204ENST00000597848 TYMSP04818 313 aa15.81■□□□□ 0.12
CHMP2A-204ENST00000597848 IBA57Q5T440 356 aaKnown RBP15.81■□□□□ 0.12
CHMP2A-204ENST00000597848 DAZAP1Q96EP5 407 aaKnown RBP15.81■□□□□ 0.12
CHMP2A-204ENST00000597848 BIN3Q9NQY0 253 aa15.81■□□□□ 0.12
CHMP2A-204ENST00000597848 MDFICQ9P1T7 246 aa15.81■□□□□ 0.12
CHMP2A-204ENST00000597848 IGKV3D-20A0A0C4DH25 116 aa15.8■□□□□ 0.12
CHMP2A-204ENST00000597848 LYRM9A8MSI8 78 aa15.8■□□□□ 0.12
CHMP2A-204ENST00000597848 TCL1AP56279 114 aa15.8■□□□□ 0.12
CHMP2A-204ENST00000597848 OCC1Q8TAD7 63 aa15.8■□□□□ 0.12
CHMP2A-204ENST00000597848 IGHV3-16A0A0C4DH30 117 aa15.79■□□□□ 0.12
CHMP2A-204ENST00000597848 DEFB130BP0DP73 79 aa15.79■□□□□ 0.12
CHMP2A-204ENST00000597848 DEFB130AP0DP74 79 aa15.79■□□□□ 0.12
CHMP2A-204ENST00000597848 OR5I1Q13606 314 aa15.79■□□□□ 0.12
CHMP2A-204ENST00000597848 TMSB15BA0A087X1C1 80 aa15.78■□□□□ 0.12
CHMP2A-204ENST00000597848 KRBOX1C9JBD0 128 aa15.78■□□□□ 0.12
CHMP2A-204ENST00000597848 DAD1P61803 113 aa15.78■□□□□ 0.12
CHMP2A-204ENST00000597848 DAZ2Q13117 558 aaKnown RBP15.78■□□□□ 0.12
CHMP2A-204ENST00000597848 C12orf74Q32Q52 190 aa15.78■□□□□ 0.12
CHMP2A-204ENST00000597848 S100A4P26447 101 aaKnown RBP15.77■□□□□ 0.12
CHMP2A-204ENST00000597848 LINC01559Q495D7 138 aa15.77■□□□□ 0.12
CHMP2A-204ENST00000597848 FAM74A3Q4VXF1 159 aa15.77■□□□□ 0.12
CHMP2A-204ENST00000597848 SOHLH1Q5JUK2 328 aa15.77■□□□□ 0.12
CHMP2A-204ENST00000597848 MUC7Q8TAX7 377 aa15.77■□□□□ 0.12
CHMP2A-204ENST00000597848 TRGV1A0A0A0MS02 117 aa15.76■□□□□ 0.11
CHMP2A-204ENST00000597848 GRIFINA4D1Z8 144 aa15.76■□□□□ 0.11
CHMP2A-204ENST00000597848 ASIPP42127 132 aa15.76■□□□□ 0.11
CHMP2A-204ENST00000597848 SPXQ9BT56 116 aa15.76■□□□□ 0.11
CHMP2A-204ENST00000597848 GAGE12BA1L429 117 aa15.75■□□□□ 0.11
CHMP2A-204ENST00000597848 K7EN84 100 aa15.75■□□□□ 0.11
CHMP2A-204ENST00000597848 GAGE7O76087 117 aa15.75■□□□□ 0.11
CHMP2A-204ENST00000597848 GAGE12FP0CL80 117 aa15.75■□□□□ 0.11
CHMP2A-204ENST00000597848 GAGE12GP0CL81 117 aa15.75■□□□□ 0.11
CHMP2A-204ENST00000597848 GAGE12IP0CL82 117 aa15.75■□□□□ 0.11
CHMP2A-204ENST00000597848 TMEM241Q24JQ0 296 aa15.75■□□□□ 0.11
CHMP2A-204ENST00000597848 LY96Q9Y6Y9 160 aa15.75■□□□□ 0.11
CHMP2A-204ENST00000597848 P01737 135 aa15.74■□□□□ 0.11
CHMP2A-204ENST00000597848 RPL19P84098 196 aaKnown RBP15.74■□□□□ 0.11
CHMP2A-204ENST00000597848 ZFAND6Q6FIF0 208 aa15.74■□□□□ 0.11
CHMP2A-204ENST00000597848 Q6ZTC4 211 aa15.74■□□□□ 0.11
CHMP2A-204ENST00000597848 Q6ZTI0 123 aa15.74■□□□□ 0.11
CHMP2A-204ENST00000597848 MRPL16Q9NX20 251 aaKnown RBP15.74■□□□□ 0.11
CHMP2A-204ENST00000597848 C19orf71A6NCJ1 209 aa15.73■□□□□ 0.11
CHMP2A-204ENST00000597848 SPINK4O60575 86 aa15.73■□□□□ 0.11
CHMP2A-204ENST00000597848 COMMD7Q86VX2 200 aa15.73■□□□□ 0.11
CHMP2A-204ENST00000597848 OR2D3Q8NGH3 330 aa15.73■□□□□ 0.11
CHMP2A-204ENST00000597848 SFTA3P0C7M3 94 aa15.72■□□□□ 0.11
CHMP2A-204ENST00000597848 LINC01551Q86U37 167 aa15.72■□□□□ 0.11
CHMP2A-204ENST00000597848 NUDT10Q8NFP7 164 aa15.72■□□□□ 0.11
CHMP2A-204ENST00000597848 PHLDA1Q8WV24 401 aaPredicted RBP15.72■□□□□ 0.11
CHMP2A-204ENST00000597848 NUDT11Q96G61 164 aa15.72■□□□□ 0.11
CHMP2A-204ENST00000597848 TRGV2A0A075B6R0 118 aa15.71■□□□□ 0.11
CHMP2A-204ENST00000597848 H3BVH4 76 aa15.71■□□□□ 0.11
CHMP2A-204ENST00000597848 M0R2P5 195 aa15.71■□□□□ 0.11
CHMP2A-204ENST00000597848 RNASE3P12724 160 aaKnown RBP15.71■□□□□ 0.11
CHMP2A-204ENST00000597848 HTN3P15516 51 aa15.71■□□□□ 0.11
CHMP2A-204ENST00000597848 LGALS9BQ3B8N2 356 aa15.71■□□□□ 0.11
CHMP2A-204ENST00000597848 UQCC3Q6UW78 93 aa15.71■□□□□ 0.11
CHMP2A-204ENST00000597848 C9orf85Q96MD7 179 aa15.71■□□□□ 0.11
CHMP2A-204ENST00000597848 RNASE7Q9H1E1 156 aaKnown RBP15.71■□□□□ 0.11
CHMP2A-204ENST00000597848 NAT8Q9UHE5 227 aa15.71■□□□□ 0.11
CHMP2A-204ENST00000597848 TRAV10A0A0B4J240 114 aa15.7■□□□□ 0.1
CHMP2A-204ENST00000597848 LINC00862A6NCI5 91 aa15.7■□□□□ 0.1
CHMP2A-204ENST00000597848 ARMS2P0C7Q2 107 aa15.7■□□□□ 0.1
CHMP2A-204ENST00000597848 DNLZQ5SXM8 178 aa15.7■□□□□ 0.1
CHMP2A-204ENST00000597848 LINC00612Q8N6U2 182 aa15.7■□□□□ 0.1
CHMP2A-204ENST00000597848 ERVFC1-1P60608 527 aa15.69■□□□□ 0.1
CHMP2A-204ENST00000597848 RPS20P60866 119 aaKnown RBP15.69■□□□□ 0.1
CHMP2A-204ENST00000597848 ZNF575Q86XF7 245 aa15.69■□□□□ 0.1
CHMP2A-204ENST00000597848 IL36BQ9NZH7 164 aa15.69■□□□□ 0.1
CHMP2A-204ENST00000597848 DEFB131BA0A096LNP1 70 aa15.68■□□□□ 0.1
CHMP2A-204ENST00000597848 C3orf84H3BNL1 204 aa15.68■□□□□ 0.1
CHMP2A-204ENST00000597848 RPL23P62829 140 aaKnown RBP15.68■□□□□ 0.1
CHMP2A-204ENST00000597848 ADIRFQ15847 76 aa15.68■□□□□ 0.1
CHMP2A-204ENST00000597848 XKRY2A2RUG3 117 aa15.67■□□□□ 0.1
CHMP2A-204ENST00000597848 GATCO43716 136 aaKnown RBP15.67■□□□□ 0.1
CHMP2A-204ENST00000597848 ATP5G1P05496 136 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms