RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 IGKV1-16P04430 117 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 TCRAP04437 139 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 SLC25A5P05141 298 aaKnown RBP2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 PYYP10082 97 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 GPR6P46095 362 aaPredicted RBP2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 ARF6P62330 175 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 VAMP3Q15836 100 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 LGALS9BQ3B8N2 356 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 OCIAD2Q56VL3 154 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 SPRNQ5BIV9 151 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 TMEM97Q5BJF2 176 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 Q6AWC8 147 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 AMMECR1LQ6DCA0 310 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 LGALS9CQ6DKI2 356 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 UFSP1Q6NVU6 142 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 SMIM15Q7Z3B0 74 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 LINC00305Q7Z4B0 112 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 ATOH7Q8N100 152 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 OR10AG1Q8NH19 301 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 LEAP2Q969E1 77 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 RNF5Q99942 180 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 HINT2Q9BX68 163 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 OTORQ9NRC9 128 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 U3KQK5 164 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 FREM1Q5H8C1 2179 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 ASCC3Q8N3C0 2202 aaKnown RBP2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 CHD8Q9HCK8 2581 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 WDR87Q6ZQQ6 2873 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 DCHS1Q96JQ0 3298 aa2.81□□□□□ -1.96
SMCHD1-208ENST00000583344 LAMA1P25391 3075 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 MED12LQ86YW9 2145 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 IGHV3OR16-12A0A075B7B8 117 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 TRAV17A0A0B4J275 112 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 LOC100131303A0A0U1RQF7 123 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 A0A1B0GUT8 65 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 LINC01546A6NGU7 62 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 OR2T8A6NH00 312 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 K7ERU9 68 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 IGHV1-46P01743 117 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 IGHV3-7P01780 117 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 GIG44P09565 113 aaPredicted RBP2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 CSN1S1P47710 185 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 DLX6P56179 175 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 PSG9Q00887 426 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 VMA21Q3ZAQ7 101 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 LINC00173Q6ZV60 143 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 C2orf91Q6ZV80 131 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 BOD1L2Q8IYS8 172 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 RPRMLQ8N4K4 120 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 CNEP1R1Q8N9A8 125 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 TNFRSF14Q92956 283 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 PGLYRP4Q96LB8 373 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 CCL13Q99616 98 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 Q9H3A6 140 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 MRPL36Q9P0J6 103 aaKnown RBP2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 KAAG1Q9UBP8 84 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 WASHC3Q9Y3C0 194 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 KNL1Q8NG31 2342 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 ZNF407Q9C0G0 2248 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 DMDP11532 3685 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 SDK2Q58EX2 2172 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 DOCK10Q96BY6 2186 aa2.8□□□□□ -1.96
SMCHD1-208ENST00000583344 RIF1Q5UIP0 2472 aaKnown RBP2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 TRBV19A0A075B6N1 114 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 TRAV8-6A0A0B4J262 113 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 MUC21A0A0G2JKD1 596 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 MUC21A0A140T8X8 626 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 TMEM189A5PLL7 270 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 RBMY1CP0DJD4 496 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 SMIM17P0DL12 118 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 CT45A10P0DMU9 189 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 FGF6P10767 208 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 ORM2P19652 201 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 PI4KAP42356 2102 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 CRIP1P50238 77 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 GNG5P63218 68 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 TNFAIP6P98066 277 aaPredicted RBP2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 FAM201AQ5SY85 155 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 PP632Q6XCG6 107 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 GTF2H5Q6ZYL4 71 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 NEGR1Q7Z3B1 354 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 S100A7AQ86SG5 101 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 BPIFA4PQ86YQ2 179 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 APRG1Q8IVJ8 170 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 ZADH2Q8N4Q0 377 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 TMEM75Q8N9X5 138 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 FER1L6-AS1Q8NA97 138 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 OR4X2Q8NGF9 303 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 MRPL20Q9BYC9 149 aaKnown RBP2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 RAB1BQ9H0U4 201 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 RETNQ9HD89 108 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 HIGD1BQ9P298 99 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 HIGD1AQ9Y241 93 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 F11RQ9Y624 299 aaKnown RBP2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 FAM208BQ5VWN6 2430 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 CACNA1HO95180 2353 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 CACNA1EQ15878 2313 aa2.79□□□□□ -1.96
SMCHD1-208ENST00000583344 CFAP47Q6ZTR5 3102 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 A0A096LNJ9 63 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 WI2-2373I1.2A0A1W2PRP0 233 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms