RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 PSMG4Q5JS54 123 aa9.98□□□□□ -0.81
CSNK1D-220ENST00000581737 RNF182Q8N6D2 247 aa9.98□□□□□ -0.81
CSNK1D-220ENST00000581737 NEU1Q99519 415 aa9.98□□□□□ -0.81
CSNK1D-220ENST00000581737 WFDC10AQ9H1F0 79 aa9.98□□□□□ -0.81
CSNK1D-220ENST00000581737 FRMD6-AS1P0C7T7 363 aa9.97□□□□□ -0.81
CSNK1D-220ENST00000581737 TRGC1P0CF51 173 aa9.97□□□□□ -0.81
CSNK1D-220ENST00000581737 NHLRC4P0CG21 123 aaPredicted RBP9.97□□□□□ -0.81
CSNK1D-220ENST00000581737 RIGQ13278 110 aa9.97□□□□□ -0.81
CSNK1D-220ENST00000581737 LOC102724200A0A096LPH7 203 aaPredicted RBP9.96□□□□□ -0.82
CSNK1D-220ENST00000581737 ZNF705FA8MVS1 300 aaPredicted RBP9.96□□□□□ -0.82
CSNK1D-220ENST00000581737 HIST1H2BKO60814 126 aa9.96□□□□□ -0.82
CSNK1D-220ENST00000581737 SH2D1AO60880 128 aa9.96□□□□□ -0.82
CSNK1D-220ENST00000581737 HIST1H2BJP06899 126 aa9.96□□□□□ -0.82
CSNK1D-220ENST00000581737 HIST1H2BOP23527 126 aa9.96□□□□□ -0.82
CSNK1D-220ENST00000581737 HLA-DMBP28068 263 aa9.96□□□□□ -0.82
CSNK1D-220ENST00000581737 HIST1H2BBP33778 126 aa9.96□□□□□ -0.82
CSNK1D-220ENST00000581737 HIST1H2BDP58876 126 aa9.96□□□□□ -0.82
CSNK1D-220ENST00000581737 HIST1H2BCP62807 126 aa9.96□□□□□ -0.82
CSNK1D-220ENST00000581737 HBBP68871 147 aa9.96□□□□□ -0.82
CSNK1D-220ENST00000581737 FABP9Q0Z7S8 132 aa9.96□□□□□ -0.82
CSNK1D-220ENST00000581737 HIST2H2BEQ16778 126 aa9.96□□□□□ -0.82
CSNK1D-220ENST00000581737 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.96□□□□□ -0.82
CSNK1D-220ENST00000581737 IGFL4Q6B9Z1 124 aa9.96□□□□□ -0.82
CSNK1D-220ENST00000581737 APRG1Q8IVJ8 170 aa9.96□□□□□ -0.82
CSNK1D-220ENST00000581737 NUP35Q8NFH5 326 aa9.96□□□□□ -0.82
CSNK1D-220ENST00000581737 HIST1H2BHQ93079 126 aa9.96□□□□□ -0.82
CSNK1D-220ENST00000581737 HIST1H2BNQ99877 126 aa9.96□□□□□ -0.82
CSNK1D-220ENST00000581737 HIST1H2BMQ99879 126 aa9.96□□□□□ -0.82
CSNK1D-220ENST00000581737 VGLL1Q99990 258 aa9.96□□□□□ -0.82
CSNK1D-220ENST00000581737 MRPL18Q9H0U6 180 aaKnown RBP9.96□□□□□ -0.82
CSNK1D-220ENST00000581737 UBE2CO00762 179 aa9.95□□□□□ -0.82
CSNK1D-220ENST00000581737 DUSP14O95147 198 aaKnown RBP9.95□□□□□ -0.82
CSNK1D-220ENST00000581737 S100A2P29034 98 aa9.95□□□□□ -0.82
CSNK1D-220ENST00000581737 APOC4P55056 127 aa9.95□□□□□ -0.82
CSNK1D-220ENST00000581737 NDUFA6P56556 154 aa9.95□□□□□ -0.82
CSNK1D-220ENST00000581737 MRPL54Q6P161 138 aaKnown RBP9.95□□□□□ -0.82
CSNK1D-220ENST00000581737 EBLN2Q6P2I7 272 aa9.95□□□□□ -0.82
CSNK1D-220ENST00000581737 STHQ8IWL8 128 aa9.95□□□□□ -0.82
CSNK1D-220ENST00000581737 C8orf49Q96NF6 230 aa9.95□□□□□ -0.82
CSNK1D-220ENST00000581737 A0A1B0GUT8 65 aa9.94□□□□□ -0.82
CSNK1D-220ENST00000581737 C5orf52A6NGY3 159 aa9.94□□□□□ -0.82
CSNK1D-220ENST00000581737 CA1P00915 261 aaPredicted RBP9.94□□□□□ -0.82
CSNK1D-220ENST00000581737 SNRPEP62304 92 aaKnown RBP9.94□□□□□ -0.82
CSNK1D-220ENST00000581737 FOXI2Q6ZQN5 318 aa9.94□□□□□ -0.82
CSNK1D-220ENST00000581737 OR8A1Q8NGG7 326 aa9.94□□□□□ -0.82
CSNK1D-220ENST00000581737 Q8TAT8 98 aa9.94□□□□□ -0.82
CSNK1D-220ENST00000581737 MUC7Q8TAX7 377 aa9.94□□□□□ -0.82
CSNK1D-220ENST00000581737 ODF3Q96PU9 254 aa9.94□□□□□ -0.82
CSNK1D-220ENST00000581737 AGPAT4-IT1Q9H0P7 198 aa9.94□□□□□ -0.82
CSNK1D-220ENST00000581737 KIR2DL5BA0A0G2JN68 375 aa9.93□□□□□ -0.82
CSNK1D-220ENST00000581737 KIR2DL5BA0A0G2JPC4 375 aa9.93□□□□□ -0.82
CSNK1D-220ENST00000581737 RBMY1BA6NDE4 496 aaKnown RBP9.93□□□□□ -0.82
CSNK1D-220ENST00000581737 RBMY1EA6NEQ0 496 aaKnown RBP9.93□□□□□ -0.82
CSNK1D-220ENST00000581737 APCSP02743 223 aa9.93□□□□□ -0.82
CSNK1D-220ENST00000581737 RBMY1DP0C7P1 496 aaKnown RBP9.93□□□□□ -0.82
CSNK1D-220ENST00000581737 TSPOP30536 169 aa9.93□□□□□ -0.82
CSNK1D-220ENST00000581737 LEPP41159 167 aa9.93□□□□□ -0.82
CSNK1D-220ENST00000581737 FOXA3P55318 350 aaPredicted RBP9.93□□□□□ -0.82
CSNK1D-220ENST00000581737 ERCC8Q13216 396 aa9.93□□□□□ -0.82
CSNK1D-220ENST00000581737 LINC00322Q6ZN03 302 aaPredicted RBP9.93□□□□□ -0.82
CSNK1D-220ENST00000581737 KIR2DL5AQ8N109 375 aa9.93□□□□□ -0.82
CSNK1D-220ENST00000581737 KIR2DL5BQ8NHK3 375 aa9.93□□□□□ -0.82
CSNK1D-220ENST00000581737 TRAV21A0A0B4J279 112 aa9.92□□□□□ -0.82
CSNK1D-220ENST00000581737 LCE6AA0A183 80 aa9.92□□□□□ -0.82
CSNK1D-220ENST00000581737 KNCNA6PVL3 124 aa9.92□□□□□ -0.82
CSNK1D-220ENST00000581737 PRAC2D3DTV9 90 aa9.92□□□□□ -0.82
CSNK1D-220ENST00000581737 ORM1P02763 201 aa9.92□□□□□ -0.82
CSNK1D-220ENST00000581737 HLA-DRB4P13762 266 aa9.92□□□□□ -0.82
CSNK1D-220ENST00000581737 CRISP2P16562 243 aa9.92□□□□□ -0.82
CSNK1D-220ENST00000581737 AKR1D1P51857 326 aa9.92□□□□□ -0.82
CSNK1D-220ENST00000581737 ZNF124Q15973 351 aa9.92□□□□□ -0.82
CSNK1D-220ENST00000581737 LINC01559Q495D7 138 aa9.92□□□□□ -0.82
CSNK1D-220ENST00000581737 TMEM136Q6ZRR5 245 aa9.92□□□□□ -0.82
CSNK1D-220ENST00000581737 PGLYRP4Q96LB8 373 aa9.92□□□□□ -0.82
CSNK1D-220ENST00000581737 HLA-DRB4X5D2U9 266 aa9.92□□□□□ -0.82
CSNK1D-220ENST00000581737 AGRNO00468 2067 aa9.91□□□□□ -0.82
CSNK1D-220ENST00000581737 F2Z2F3 143 aa9.91□□□□□ -0.82
CSNK1D-220ENST00000581737 SPINK4O60575 86 aa9.91□□□□□ -0.82
CSNK1D-220ENST00000581737 RPL35AP18077 110 aaKnown RBP9.91□□□□□ -0.82
CSNK1D-220ENST00000581737 HOXA5P20719 270 aa9.91□□□□□ -0.82
CSNK1D-220ENST00000581737 COA6Q5JTJ3 125 aaKnown RBP9.91□□□□□ -0.82
CSNK1D-220ENST00000581737 MORN3Q6PF18 240 aaPredicted RBP9.91□□□□□ -0.82
CSNK1D-220ENST00000581737 TRPT1Q86TN4 253 aaKnown RBP9.91□□□□□ -0.82
CSNK1D-220ENST00000581737 FER1L6-AS1Q8NA97 138 aa9.91□□□□□ -0.82
CSNK1D-220ENST00000581737 C20orf173Q96LM9 149 aa9.91□□□□□ -0.82
CSNK1D-220ENST00000581737 HERC2O95714 4834 aa9.91□□□□□ -0.82
CSNK1D-220ENST00000581737 A0A0J9YX75 114 aa9.9□□□□□ -0.82
CSNK1D-220ENST00000581737 A0A1B0GXF2 115 aa9.9□□□□□ -0.82
CSNK1D-220ENST00000581737 H3BMM0 161 aa9.9□□□□□ -0.82
CSNK1D-220ENST00000581737 PHOX2AO14813 284 aa9.9□□□□□ -0.82
CSNK1D-220ENST00000581737 GPX1P07203 203 aa9.9□□□□□ -0.82
CSNK1D-220ENST00000581737 CAMPP49913 170 aa9.9□□□□□ -0.82
CSNK1D-220ENST00000581737 NUTF2P61970 127 aaKnown RBP9.9□□□□□ -0.82
CSNK1D-220ENST00000581737 OR10J3Q5JRS4 329 aa9.9□□□□□ -0.82
CSNK1D-220ENST00000581737 SMIM15Q7Z3B0 74 aa9.9□□□□□ -0.82
CSNK1D-220ENST00000581737 CLUHP3Q96NS8 147 aa9.9□□□□□ -0.82
CSNK1D-220ENST00000581737 CSTL1Q9H114 145 aa9.9□□□□□ -0.82
CSNK1D-220ENST00000581737 ZMAT4Q9H898 229 aa9.9□□□□□ -0.82
CSNK1D-220ENST00000581737 CTRLP40313 264 aa9.89□□□□□ -0.83
CSNK1D-220ENST00000581737 CRIP1P50238 77 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms