RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 ODF3L2Q3SX64 289 aa10.29□□□□□ -0.76
CDK5RAP3-219ENST00000580670 ZNF705AQ6ZN79 300 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP3-219ENST00000580670 FOXI2Q6ZQN5 318 aa10.29□□□□□ -0.76
CDK5RAP3-219ENST00000580670 C8orf49Q96NF6 230 aa10.29□□□□□ -0.76
CDK5RAP3-219ENST00000580670 ZNF492Q9P255 531 aa10.29□□□□□ -0.76
CDK5RAP3-219ENST00000580670 TRRAPQ9Y4A5 3859 aa10.29□□□□□ -0.76
CDK5RAP3-219ENST00000580670 KNCNA6PVL3 124 aa10.29□□□□□ -0.76
CDK5RAP3-219ENST00000580670 SERF1AO75920 110 aa10.29□□□□□ -0.76
CDK5RAP3-219ENST00000580670 LINC00614P0C842 121 aa10.29□□□□□ -0.76
CDK5RAP3-219ENST00000580670 CT45A10P0DMU9 189 aa10.29□□□□□ -0.76
CDK5RAP3-219ENST00000580670 G0S2P27469 103 aa10.29□□□□□ -0.76
CDK5RAP3-219ENST00000580670 BEAN1Q3B7T3 259 aa10.29□□□□□ -0.76
CDK5RAP3-219ENST00000580670 TMEM208Q9BTX3 173 aa10.29□□□□□ -0.76
CDK5RAP3-219ENST00000580670 GRIFINA4D1Z8 144 aa10.28□□□□□ -0.76
CDK5RAP3-219ENST00000580670 OR11H12B2RN74 326 aa10.28□□□□□ -0.76
CDK5RAP3-219ENST00000580670 MT-ND6P03923 174 aa10.28□□□□□ -0.76
CDK5RAP3-219ENST00000580670 CMC4P56277 68 aaPredicted RBP10.28□□□□□ -0.76
CDK5RAP3-219ENST00000580670 RPL19P84098 196 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-219ENST00000580670 PRR27Q6MZM9 219 aa10.28□□□□□ -0.76
CDK5RAP3-219ENST00000580670 APRG1Q8IVJ8 170 aa10.28□□□□□ -0.76
CDK5RAP3-219ENST00000580670 ZC2HC1AQ96GY0 325 aa10.28□□□□□ -0.76
CDK5RAP3-219ENST00000580670 V9GYV3 84 aa10.28□□□□□ -0.76
CDK5RAP3-219ENST00000580670 DUSP14O95147 198 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP3-219ENST00000580670 CD7P09564 240 aa10.27□□□□□ -0.77
CDK5RAP3-219ENST00000580670 OR10J3Q5JRS4 329 aa10.27□□□□□ -0.77
CDK5RAP3-219ENST00000580670 OR4B1Q8NGF8 309 aa10.27□□□□□ -0.77
CDK5RAP3-219ENST00000580670 GOLT1BQ9Y3E0 138 aa10.27□□□□□ -0.77
CDK5RAP3-219ENST00000580670 IGKV3-20P01619 116 aa10.26□□□□□ -0.77
CDK5RAP3-219ENST00000580670 GPX1P07203 203 aa10.26□□□□□ -0.77
CDK5RAP3-219ENST00000580670 TDRG1Q3Y452 100 aa10.26□□□□□ -0.77
CDK5RAP3-219ENST00000580670 PRR31Q5SQ13 230 aa10.26□□□□□ -0.77
CDK5RAP3-219ENST00000580670 WDR73Q6P4I2 378 aa10.26□□□□□ -0.77
CDK5RAP3-219ENST00000580670 Q8N976 141 aa10.26□□□□□ -0.77
CDK5RAP3-219ENST00000580670 VAMP8Q9BV40 100 aa10.26□□□□□ -0.77
CDK5RAP3-219ENST00000580670 RNASE7Q9H1E1 156 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-219ENST00000580670 LENEPQ9Y5L5 61 aa10.26□□□□□ -0.77
CDK5RAP3-219ENST00000580670 AGRNO00468 2067 aa10.26□□□□□ -0.77
CDK5RAP3-219ENST00000580670 HLA-DRB4P13762 266 aa10.26□□□□□ -0.77
CDK5RAP3-219ENST00000580670 LINC00322Q6ZN03 302 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-219ENST00000580670 COX8CQ7Z4L0 72 aa10.26□□□□□ -0.77
CDK5RAP3-219ENST00000580670 BAGE3Q86Y29 109 aa10.26□□□□□ -0.77
CDK5RAP3-219ENST00000580670 FAM110AQ9BQ89 295 aa10.26□□□□□ -0.77
CDK5RAP3-219ENST00000580670 OSTCQ9NRP0 149 aa10.26□□□□□ -0.77
CDK5RAP3-219ENST00000580670 HLA-DRB4X5D2U9 266 aa10.26□□□□□ -0.77
CDK5RAP3-219ENST00000580670 H3BMM0 161 aa10.25□□□□□ -0.77
CDK5RAP3-219ENST00000580670 WIPF1O43516 503 aa10.25□□□□□ -0.77
CDK5RAP3-219ENST00000580670 CTRLP40313 264 aa10.25□□□□□ -0.77
CDK5RAP3-219ENST00000580670 RIPPLY3P57055 190 aa10.25□□□□□ -0.77
CDK5RAP3-219ENST00000580670 IBA57Q5T440 356 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-219ENST00000580670 FAM19A4Q96LR4 140 aa10.25□□□□□ -0.77
CDK5RAP3-219ENST00000580670 ANK2Q01484 3957 aa10.25□□□□□ -0.77
CDK5RAP3-219ENST00000580670 TRBV7-9A0A0J9YWB2 115 aa10.24□□□□□ -0.77
CDK5RAP3-219ENST00000580670 SNURFLB1AK76 121 aa10.24□□□□□ -0.77
CDK5RAP3-219ENST00000580670 J3KRW8 73 aa10.24□□□□□ -0.77
CDK5RAP3-219ENST00000580670 DAZAP1Q96EP5 407 aaKnown RBP10.24□□□□□ -0.77
CDK5RAP3-219ENST00000580670 C19orf73Q9NVV2 129 aa10.24□□□□□ -0.77
CDK5RAP3-219ENST00000580670 CRIP1P50238 77 aa10.24□□□□□ -0.77
CDK5RAP3-219ENST00000580670 ZNF80P51504 273 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-219ENST00000580670 FAM162BQ5T6X4 162 aa10.24□□□□□ -0.77
CDK5RAP3-219ENST00000580670 TMEM136Q6ZRR5 245 aa10.24□□□□□ -0.77
CDK5RAP3-219ENST00000580670 FAM231DQ6ZW35 169 aa10.24□□□□□ -0.77
CDK5RAP3-219ENST00000580670 GTSCR1Q86UQ5 136 aa10.24□□□□□ -0.77
CDK5RAP3-219ENST00000580670 ZFAND2AQ8N6M9 145 aa10.24□□□□□ -0.77
CDK5RAP3-219ENST00000580670 NUDT10Q8NFP7 164 aa10.24□□□□□ -0.77
CDK5RAP3-219ENST00000580670 NUDT11Q96G61 164 aa10.24□□□□□ -0.77
CDK5RAP3-219ENST00000580670 ODF3Q96PU9 254 aa10.24□□□□□ -0.77
CDK5RAP3-219ENST00000580670 SAMD10Q9BYL1 202 aa10.24□□□□□ -0.77
CDK5RAP3-219ENST00000580670 WFDC10AQ9H1F0 79 aa10.24□□□□□ -0.77
CDK5RAP3-219ENST00000580670 C19orf71A6NCJ1 209 aa10.23□□□□□ -0.77
CDK5RAP3-219ENST00000580670 SH2D1AO60880 128 aa10.23□□□□□ -0.77
CDK5RAP3-219ENST00000580670 LEPP41159 167 aa10.23□□□□□ -0.77
CDK5RAP3-219ENST00000580670 OXLD1Q5BKU9 147 aa10.23□□□□□ -0.77
CDK5RAP3-219ENST00000580670 COL5A1-AS1Q5SY13 56 aa10.23□□□□□ -0.77
CDK5RAP3-219ENST00000580670 PRR9Q5T870 116 aa10.23□□□□□ -0.77
CDK5RAP3-219ENST00000580670 STHQ8IWL8 128 aa10.23□□□□□ -0.77
CDK5RAP3-219ENST00000580670 PAM16Q9Y3D7 125 aa10.23□□□□□ -0.77
CDK5RAP3-219ENST00000580670 A8MTW9 85 aa10.22□□□□□ -0.77
CDK5RAP3-219ENST00000580670 F2Z2F3 143 aa10.22□□□□□ -0.77
CDK5RAP3-219ENST00000580670 P01737 135 aa10.22□□□□□ -0.77
CDK5RAP3-219ENST00000580670 AMTNQ6UX39 209 aa10.22□□□□□ -0.77
CDK5RAP3-219ENST00000580670 SMIM27A0A1W2PRY6 76 aa10.21□□□□□ -0.77
CDK5RAP3-219ENST00000580670 RBMY1BA6NDE4 496 aaKnown RBP10.21□□□□□ -0.77
CDK5RAP3-219ENST00000580670 RBMY1EA6NEQ0 496 aaKnown RBP10.21□□□□□ -0.77
CDK5RAP3-219ENST00000580670 FABP5P3A8MUU1 101 aa10.21□□□□□ -0.77
CDK5RAP3-219ENST00000580670 M0R2Z0 102 aa10.21□□□□□ -0.77
CDK5RAP3-219ENST00000580670 NPSP0C0P6 89 aa10.21□□□□□ -0.77
CDK5RAP3-219ENST00000580670 RBMY1DP0C7P1 496 aaKnown RBP10.21□□□□□ -0.77
CDK5RAP3-219ENST00000580670 FRMD6-AS1P0C7T7 363 aa10.21□□□□□ -0.77
CDK5RAP3-219ENST00000580670 TSPOP30536 169 aa10.21□□□□□ -0.77
CDK5RAP3-219ENST00000580670 RNASE4P34096 147 aaKnown RBP10.21□□□□□ -0.77
CDK5RAP3-219ENST00000580670 KIR3DS1Q14943 382 aa10.21□□□□□ -0.77
CDK5RAP3-219ENST00000580670 SPINK13Q1W4C9 94 aa10.21□□□□□ -0.77
CDK5RAP3-219ENST00000580670 KCNS1Q96KK3 526 aa10.21□□□□□ -0.77
CDK5RAP3-219ENST00000580670 KLLNB2CW77 178 aa10.21□□□□□ -0.78
CDK5RAP3-219ENST00000580670 HLA-DQA1P01909 254 aa10.21□□□□□ -0.78
CDK5RAP3-219ENST00000580670 CDKN1BP46527 198 aa10.21□□□□□ -0.78
CDK5RAP3-219ENST00000580670 FXYD7P58549 80 aa10.21□□□□□ -0.78
CDK5RAP3-219ENST00000580670 RASL11AQ6T310 242 aa10.21□□□□□ -0.78
CDK5RAP3-219ENST00000580670 RPP21Q9H633 154 aaKnown RBP10.21□□□□□ -0.78
CDK5RAP3-219ENST00000580670 NAT8BQ9UHF3 227 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms