RNA–Protein interactions for RNA: ENST00000574875.1

ABR-231, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 2

Gene ABR, Length 239 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-231	ENST00000574875		M0R2Z0	102 aa		13.93	□□□□□ -0.18
ABR-231	ENST00000574875	IGLV2-8	P01709	118 aa		13.93	□□□□□ -0.18
ABR-231	ENST00000574875	RAB5A	P20339	215 aa		13.93	□□□□□ -0.18
ABR-231	ENST00000574875	HIST1H1A	Q02539	215 aa	Predicted RBP	13.93	□□□□□ -0.18
ABR-231	ENST00000574875	SPINK13	Q1W4C9	94 aa		13.93	□□□□□ -0.18
ABR-231	ENST00000574875	RRN3P1	Q2M238	152 aa		13.93	□□□□□ -0.18
ABR-231	ENST00000574875	TMEM75	Q8N9X5	138 aa		13.93	□□□□□ -0.18
ABR-231	ENST00000574875	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.93	□□□□□ -0.18
ABR-231	ENST00000574875	PPP1R14D	Q9NXH3	145 aa		13.93	□□□□□ -0.18
ABR-231	ENST00000574875	RPH3AL	Q9UNE2	315 aa		13.93	□□□□□ -0.18
ABR-231	ENST00000574875	SLC17A3	O00476	420 aa		13.92	□□□□□ -0.18
ABR-231	ENST00000574875	CRX	O43186	299 aa	Predicted RBP	13.92	□□□□□ -0.18
ABR-231	ENST00000574875	PFN1	P07737	140 aa	Known RBP	13.92	□□□□□ -0.18
ABR-231	ENST00000574875	IGHV4-4	A0A075B6R2	117 aa		13.91	□□□□□ -0.18
ABR-231	ENST00000574875	TRAV34	A0A0B4J273	112 aa		13.91	□□□□□ -0.18
ABR-231	ENST00000574875	DIRC3	C9JPN6	131 aa		13.91	□□□□□ -0.18
ABR-231	ENST00000574875	LTA	P01374	205 aa		13.91	□□□□□ -0.18
ABR-231	ENST00000574875	ERVFC1-1	P60608	527 aa		13.91	□□□□□ -0.18
ABR-231	ENST00000574875	GOLT1A	Q6ZVE7	132 aa		13.91	□□□□□ -0.18
ABR-231	ENST00000574875	FAM231D	Q6ZW35	169 aa		13.91	□□□□□ -0.18
ABR-231	ENST00000574875	MRPL53	Q96EL3	112 aa	Known RBP	13.91	□□□□□ -0.18
ABR-231	ENST00000574875	LINC00479	Q96M42	142 aa		13.91	□□□□□ -0.18
ABR-231	ENST00000574875	DKK2	Q9UBU2	259 aa		13.91	□□□□□ -0.18
ABR-231	ENST00000574875	TRAV9-1	A0A075B6T8	112 aa		13.9	□□□□□ -0.18
ABR-231	ENST00000574875	INS	P01308	110 aa		13.9	□□□□□ -0.18
ABR-231	ENST00000574875	PRB4	P10163	310 aa	Predicted RBP	13.9	□□□□□ -0.18
ABR-231	ENST00000574875	MGST1	P10620	155 aa	Known RBP	13.9	□□□□□ -0.18
ABR-231	ENST00000574875	FAM222A	Q5U5X8	452 aa		13.9	□□□□□ -0.18
ABR-231	ENST00000574875	PYGO2	Q9BRQ0	406 aa		13.9	□□□□□ -0.18
ABR-231	ENST00000574875	ZFP30	Q9Y2G7	519 aa		13.9	□□□□□ -0.18
ABR-231	ENST00000574875	URGCP-MRPS24	S4R325	110 aa		13.9	□□□□□ -0.18
ABR-231	ENST00000574875	TRAV12-2	A0A075B6T6	113 aa		13.89	□□□□□ -0.19
ABR-231	ENST00000574875	TEX48	A0A1B0GUV7	120 aa		13.89	□□□□□ -0.19
ABR-231	ENST00000574875		Q86TA4	180 aa		13.89	□□□□□ -0.19
ABR-231	ENST00000574875	FAM210B	Q96KR6	192 aa		13.89	□□□□□ -0.19
ABR-231	ENST00000574875	MLST8	Q9BVC4	326 aa		13.89	□□□□□ -0.19
ABR-231	ENST00000574875	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.88	□□□□□ -0.19
ABR-231	ENST00000574875	C1orf196	B1AJZ1	125 aa		13.88	□□□□□ -0.19
ABR-231	ENST00000574875	FLI1	Q01543	452 aa	Predicted RBP	13.88	□□□□□ -0.19
ABR-231	ENST00000574875	IBA57	Q5T440	356 aa	Known RBP	13.88	□□□□□ -0.19
ABR-231	ENST00000574875	TMEM183A	Q8IXX5	376 aa		13.88	□□□□□ -0.19
ABR-231	ENST00000574875	IL36B	Q9NZH7	164 aa		13.88	□□□□□ -0.19
ABR-231	ENST00000574875	ZNF492	Q9P255	531 aa		13.88	□□□□□ -0.19
ABR-231	ENST00000574875	TGIF2-C20orf24	A0A0A6YYL0	155 aa		13.87	□□□□□ -0.19
ABR-231	ENST00000574875	PRM2	P04554	102 aa		13.87	□□□□□ -0.19
ABR-231	ENST00000574875	CXCL1	P09341	107 aa		13.87	□□□□□ -0.19
ABR-231	ENST00000574875	RPL19	P84098	196 aa	Known RBP	13.87	□□□□□ -0.19
ABR-231	ENST00000574875	OR5I1	Q13606	314 aa		13.87	□□□□□ -0.19
ABR-231	ENST00000574875	LINC01587	Q99440	93 aa		13.87	□□□□□ -0.19
ABR-231	ENST00000574875	IGLV2-11	P01706	119 aa		13.86	□□□□□ -0.19
ABR-231	ENST00000574875	RAB5B	P61020	215 aa		13.86	□□□□□ -0.19
ABR-231	ENST00000574875	OR10J6P	Q8NGY7	276 aa		13.86	□□□□□ -0.19
ABR-231	ENST00000574875	NDUFAF3	Q9BU61	184 aa		13.86	□□□□□ -0.19
ABR-231	ENST00000574875	PSG8	Q9UQ74	426 aa		13.86	□□□□□ -0.19
ABR-231	ENST00000574875		V9GYV3	84 aa		13.86	□□□□□ -0.19
ABR-231	ENST00000574875	KMT2A	Q03164	3969 aa		13.85	□□□□□ -0.19
ABR-231	ENST00000574875	RBAKDN	A6NC62	111 aa		13.85	□□□□□ -0.19
ABR-231	ENST00000574875	PRAC2	D3DTV9	90 aa		13.85	□□□□□ -0.19
ABR-231	ENST00000574875		M0R3E3	92 aa		13.85	□□□□□ -0.19
ABR-231	ENST00000574875	CDKN1B	P46527	198 aa		13.85	□□□□□ -0.19
ABR-231	ENST00000574875	RPS10	P46783	165 aa	Known RBP	13.85	□□□□□ -0.19
ABR-231	ENST00000574875	PRNT	Q86SH4	94 aa		13.85	□□□□□ -0.19
ABR-231	ENST00000574875	VPS13D	Q5THJ4	4388 aa		13.85	□□□□□ -0.19
ABR-231	ENST00000574875	GATC	O43716	136 aa	Known RBP	13.84	□□□□□ -0.19
ABR-231	ENST00000574875	TYMS	P04818	313 aa		13.84	□□□□□ -0.19
ABR-231	ENST00000574875	SAPCD1	Q5SSQ6	148 aa		13.84	□□□□□ -0.19
ABR-231	ENST00000574875	TMEM256	Q8N2U0	113 aa		13.84	□□□□□ -0.19
ABR-231	ENST00000574875	NHLRC2	Q8NBF2	726 aa		13.84	□□□□□ -0.19
ABR-231	ENST00000574875		A0A1W2PPQ1	181 aa		13.83	□□□□□ -0.2
ABR-231	ENST00000574875	AZU1	P20160	251 aa		13.83	□□□□□ -0.2
ABR-231	ENST00000574875	TSPO	P30536	169 aa		13.83	□□□□□ -0.2
ABR-231	ENST00000574875	DAD1	P61803	113 aa		13.83	□□□□□ -0.2
ABR-231	ENST00000574875	CT83	Q5H943	113 aa		13.83	□□□□□ -0.2
ABR-231	ENST00000574875	COX8C	Q7Z4L0	72 aa		13.83	□□□□□ -0.2
ABR-231	ENST00000574875	DAZAP1	Q96EP5	407 aa	Known RBP	13.83	□□□□□ -0.2
ABR-231	ENST00000574875	RNASE7	Q9H1E1	156 aa	Known RBP	13.83	□□□□□ -0.2
ABR-231	ENST00000574875	TRAV8-1	A0A0A6YYK1	113 aa		13.82	□□□□□ -0.2
ABR-231	ENST00000574875	HTN1	P15515	57 aa		13.82	□□□□□ -0.2
ABR-231	ENST00000574875	HTN3	P15516	51 aa		13.82	□□□□□ -0.2
ABR-231	ENST00000574875	NUDT10	Q8NFP7	164 aa		13.82	□□□□□ -0.2
ABR-231	ENST00000574875	NUDT11	Q96G61	164 aa		13.82	□□□□□ -0.2
ABR-231	ENST00000574875	SGK494	Q96LW2	274 aa		13.82	□□□□□ -0.2
ABR-231	ENST00000574875	C19orf71	A6NCJ1	209 aa		13.81	□□□□□ -0.2
ABR-231	ENST00000574875	LYRM9	A8MSI8	78 aa		13.81	□□□□□ -0.2
ABR-231	ENST00000574875	FAM3B	P58499	235 aa	Predicted RBP	13.81	□□□□□ -0.2
ABR-231	ENST00000574875	NDFIP1	Q9BT67	221 aa		13.81	□□□□□ -0.2
ABR-231	ENST00000574875	SMIM27	A0A1W2PRY6	76 aa		13.8	□□□□□ -0.2
ABR-231	ENST00000574875		P01737	135 aa		13.8	□□□□□ -0.2
ABR-231	ENST00000574875		P0DMU3	169 aa		13.8	□□□□□ -0.2
ABR-231	ENST00000574875	FAM231A	P0DMU4	169 aa		13.8	□□□□□ -0.2
ABR-231	ENST00000574875	FAM231C	P0DMU5	169 aa		13.8	□□□□□ -0.2
ABR-231	ENST00000574875	CT45A10	P0DMU9	189 aa		13.8	□□□□□ -0.2
ABR-231	ENST00000574875	KIR3DS1	Q14943	382 aa		13.8	□□□□□ -0.2
ABR-231	ENST00000574875	PRR27	Q6MZM9	219 aa		13.8	□□□□□ -0.2
ABR-231	ENST00000574875	C20orf144	Q9BQM9	153 aa		13.8	□□□□□ -0.2
ABR-231	ENST00000574875	RPP21	Q9H633	154 aa	Known RBP	13.8	□□□□□ -0.2
ABR-231	ENST00000574875	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.79	□□□□□ -0.2
ABR-231	ENST00000574875	IGKV2D-40	P01614	121 aa	Predicted RBP	13.79	□□□□□ -0.2
ABR-231	ENST00000574875	COX19	Q49B96	90 aa		13.79	□□□□□ -0.2
ABR-231	ENST00000574875	PLAC8L1	A1L4L8	177 aa		13.78	□□□□□ -0.2

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