RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 ZNF479Q96JC4 524 aa20.89■□□□□ 0.93
CTDNEP1-206ENST00000571409 IGHV3-16A0A0C4DH30 117 aa20.88■□□□□ 0.93
CTDNEP1-206ENST00000571409 GGTLC3B5MD39 225 aa20.88■□□□□ 0.93
CTDNEP1-206ENST00000571409 TYMSP04818 313 aa20.88■□□□□ 0.93
CTDNEP1-206ENST00000571409 SDF2L1Q9HCN8 221 aa20.88■□□□□ 0.93
CTDNEP1-206ENST00000571409 G3V3Q6 166 aa20.87■□□□□ 0.93
CTDNEP1-206ENST00000571409 MED14OSP0DP75 135 aa20.87■□□□□ 0.93
CTDNEP1-206ENST00000571409 A0A1W2PPQ1 181 aa20.86■□□□□ 0.93
CTDNEP1-206ENST00000571409 ZNF575Q86XF7 245 aa20.86■□□□□ 0.93
CTDNEP1-206ENST00000571409 KCNS1Q96KK3 526 aa20.86■□□□□ 0.93
CTDNEP1-206ENST00000571409 EPDR1Q9UM22 224 aa20.86■□□□□ 0.93
CTDNEP1-206ENST00000571409 PSG8Q9UQ74 426 aa20.86■□□□□ 0.93
CTDNEP1-206ENST00000571409 M0R2P5 195 aa20.85■□□□□ 0.93
CTDNEP1-206ENST00000571409 ZNF726P1Q15940 193 aa20.85■□□□□ 0.93
CTDNEP1-206ENST00000571409 MRPL23Q16540 153 aaKnown RBP20.85■□□□□ 0.93
CTDNEP1-206ENST00000571409 IGLV2-11P01706 119 aa20.84■□□□□ 0.93
CTDNEP1-206ENST00000571409 ZNF80P51504 273 aaPredicted RBP20.84■□□□□ 0.93
CTDNEP1-206ENST00000571409 FLI1Q01543 452 aaPredicted RBP20.84■□□□□ 0.93
CTDNEP1-206ENST00000571409 CYB561D1Q8N8Q1 229 aa20.84■□□□□ 0.93
CTDNEP1-206ENST00000571409 TRAV4A0A0B4J268 109 aa20.83■□□□□ 0.93
CTDNEP1-206ENST00000571409 CTXND1A0A1B0GTU2 59 aa20.83■□□□□ 0.93
CTDNEP1-206ENST00000571409 ARPC5O15511 151 aa20.83■□□□□ 0.93
CTDNEP1-206ENST00000571409 DNAH11Q96DT5 4516 aa20.83■□□□□ 0.92
CTDNEP1-206ENST00000571409 DYNC1H1Q14204 4646 aaKnown RBP20.82■□□□□ 0.92
CTDNEP1-206ENST00000571409 A0A1W2PRE2 83 aa20.82■□□□□ 0.92
CTDNEP1-206ENST00000571409 SIVA1O15304 175 aa20.82■□□□□ 0.92
CTDNEP1-206ENST00000571409 NXPH4O95158 308 aa20.82■□□□□ 0.92
CTDNEP1-206ENST00000571409 GCGP01275 180 aa20.82■□□□□ 0.92
CTDNEP1-206ENST00000571409 PRNTQ86SH4 94 aa20.82■□□□□ 0.92
CTDNEP1-206ENST00000571409 TMEM75Q8N9X5 138 aa20.82■□□□□ 0.92
CTDNEP1-206ENST00000571409 OR4C5Q8NGB2 326 aa20.82■□□□□ 0.92
CTDNEP1-206ENST00000571409 AKR1C8PQ5T2L2 129 aa20.81■□□□□ 0.92
CTDNEP1-206ENST00000571409 LYPD5Q6UWN5 251 aa20.81■□□□□ 0.92
CTDNEP1-206ENST00000571409 NEGR1Q7Z3B1 354 aa20.81■□□□□ 0.92
CTDNEP1-206ENST00000571409 C11orf21Q9P2W6 132 aa20.81■□□□□ 0.92
CTDNEP1-206ENST00000571409 K7EQD1 137 aa20.8■□□□□ 0.92
CTDNEP1-206ENST00000571409 TAAR5O14804 337 aa20.8■□□□□ 0.92
CTDNEP1-206ENST00000571409 ZFP69Q49AA0 526 aa20.8■□□□□ 0.92
CTDNEP1-206ENST00000571409 PFN1P07737 140 aaKnown RBP20.79■□□□□ 0.92
CTDNEP1-206ENST00000571409 GYPEP15421 78 aa20.79■□□□□ 0.92
CTDNEP1-206ENST00000571409 SMUG1Q53HV7 270 aa20.79■□□□□ 0.92
CTDNEP1-206ENST00000571409 PCNPQ8WW12 178 aaKnown RBP20.79■□□□□ 0.92
CTDNEP1-206ENST00000571409 FBLL1A6NHQ2 334 aaKnown RBP20.78■□□□□ 0.92
CTDNEP1-206ENST00000571409 ORM1P02763 201 aa20.78■□□□□ 0.92
CTDNEP1-206ENST00000571409 SRIP30626 198 aa20.78■□□□□ 0.92
CTDNEP1-206ENST00000571409 FGF8P55075 233 aaPredicted RBP20.78■□□□□ 0.92
CTDNEP1-206ENST00000571409 UBE2G2P60604 165 aa20.78■□□□□ 0.92
CTDNEP1-206ENST00000571409 CYTL1Q9NRR1 136 aa20.78■□□□□ 0.92
CTDNEP1-206ENST00000571409 SMLR1H3BR10 107 aa20.77■□□□□ 0.92
CTDNEP1-206ENST00000571409 BTF3P20290 206 aaKnown RBP20.77■□□□□ 0.92
CTDNEP1-206ENST00000571409 LINC00479Q96M42 142 aa20.77■□□□□ 0.92
CTDNEP1-206ENST00000571409 IFNA7P01567 189 aa20.76■□□□□ 0.91
CTDNEP1-206ENST00000571409 SAPCD1Q5SSQ6 148 aa20.76■□□□□ 0.91
CTDNEP1-206ENST00000571409 TRAV34A0A0B4J273 112 aa20.75■□□□□ 0.91
CTDNEP1-206ENST00000571409 C9JCJ5 164 aa20.75■□□□□ 0.91
CTDNEP1-206ENST00000571409 LINC00315P59091 139 aa20.75■□□□□ 0.91
CTDNEP1-206ENST00000571409 C16orf90A8MZG2 172 aa20.74■□□□□ 0.91
CTDNEP1-206ENST00000571409 ZNF876PQ49A33 203 aa20.73■□□□□ 0.91
CTDNEP1-206ENST00000571409 MAP1LC3B2A6NCE7 125 aa20.72■□□□□ 0.91
CTDNEP1-206ENST00000571409 FAM74A7A6NL05 159 aa20.72■□□□□ 0.91
CTDNEP1-206ENST00000571409 PEX7O00628 323 aa20.72■□□□□ 0.91
CTDNEP1-206ENST00000571409 PPT1P50897 306 aa20.72■□□□□ 0.91
CTDNEP1-206ENST00000571409 C9orf85Q96MD7 179 aa20.72■□□□□ 0.91
CTDNEP1-206ENST00000571409 TXNDC17Q9BRA2 123 aa20.72■□□□□ 0.91
CTDNEP1-206ENST00000571409 NKX6-2Q9C056 277 aaPredicted RBP20.72■□□□□ 0.91
CTDNEP1-206ENST00000571409 MAP1LC3BQ9GZQ8 125 aa20.72■□□□□ 0.91
CTDNEP1-206ENST00000571409 ARL2-SNX15V9GYD0 113 aa20.72■□□□□ 0.91
CTDNEP1-206ENST00000571409 LOC100131303A0A0U1RQF7 123 aa20.71■□□□□ 0.91
CTDNEP1-206ENST00000571409 GATA1P15976 413 aaPredicted RBP20.71■□□□□ 0.91
CTDNEP1-206ENST00000571409 KRTAP17-1Q9BYP8 105 aa20.71■□□□□ 0.91
CTDNEP1-206ENST00000571409 DPPA3Q6W0C5 159 aa20.69■□□□□ 0.9
CTDNEP1-206ENST00000571409 HIST1H2BAQ96A08 127 aa20.69■□□□□ 0.9
CTDNEP1-206ENST00000571409 RS1O15537 224 aa20.68■□□□□ 0.9
CTDNEP1-206ENST00000571409 RNASE3P12724 160 aaKnown RBP20.68■□□□□ 0.9
CTDNEP1-206ENST00000571409 ZNF345Q14585 488 aa20.68■□□□□ 0.9
CTDNEP1-206ENST00000571409 CFAP126Q5VTH2 177 aa20.68■□□□□ 0.9
CTDNEP1-206ENST00000571409 SPATA12Q7Z6I5 190 aa20.68■□□□□ 0.9
CTDNEP1-206ENST00000571409 Q86TA4 180 aa20.68■□□□□ 0.9
CTDNEP1-206ENST00000571409 KCNRGQ8N5I3 272 aa20.68■□□□□ 0.9
CTDNEP1-206ENST00000571409 PGPEP1LA6NFU8 196 aa20.67■□□□□ 0.9
CTDNEP1-206ENST00000571409 Q6ZRN7 208 aaPredicted RBP20.67■□□□□ 0.9
CTDNEP1-206ENST00000571409 WFDC10BQ8IUB3 73 aa20.67■□□□□ 0.9
CTDNEP1-206ENST00000571409 LY96Q9Y6Y9 160 aa20.67■□□□□ 0.9
CTDNEP1-206ENST00000571409 ZNF506Q5JVG8 444 aa20.66■□□□□ 0.9
CTDNEP1-206ENST00000571409 NHLRC2Q8NBF2 726 aa20.66■□□□□ 0.9
CTDNEP1-206ENST00000571409 IGKV3D-20A0A0C4DH25 116 aa20.65■□□□□ 0.9
CTDNEP1-206ENST00000571409 FABP5P3A8MUU1 101 aa20.65■□□□□ 0.9
CTDNEP1-206ENST00000571409 CIDEAO60543 219 aa20.65■□□□□ 0.9
CTDNEP1-206ENST00000571409 FHITP49789 147 aa20.65■□□□□ 0.9
CTDNEP1-206ENST00000571409 SH2D6Q7Z4S9 175 aa20.65■□□□□ 0.9
CTDNEP1-206ENST00000571409 STOML3Q8TAV4 291 aa20.65■□□□□ 0.9
CTDNEP1-206ENST00000571409 PTH2Q96A98 100 aa20.65■□□□□ 0.9
CTDNEP1-206ENST00000571409 IGHV3-73A0A0B4J1V6 119 aa20.64■□□□□ 0.89
CTDNEP1-206ENST00000571409 SLC25A29Q8N8R3 303 aa20.64■□□□□ 0.89
CTDNEP1-206ENST00000571409 OR11H4Q8NGC9 324 aa20.64■□□□□ 0.89
CTDNEP1-206ENST00000571409 TNFRSF18Q9Y5U5 241 aa20.64■□□□□ 0.89
CTDNEP1-206ENST00000571409 TRAV9-2A0A087WT02 112 aa20.63■□□□□ 0.89
CTDNEP1-206ENST00000571409 S100A4P26447 101 aaKnown RBP20.63■□□□□ 0.89
CTDNEP1-206ENST00000571409 HMSDA8MTL9 139 aa20.62■□□□□ 0.89
CTDNEP1-206ENST00000571409 CST9LP1Q5W188 147 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms