RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 SH2D1AO60880 128 aa8.26□□□□□ -1.09
KARS-207ENST00000566560 PRM2P04554 102 aa8.26□□□□□ -1.09
KARS-207ENST00000566560 MGST1P10620 155 aaKnown RBP8.26□□□□□ -1.09
KARS-207ENST00000566560 EMP1P54849 157 aa8.26□□□□□ -1.09
KARS-207ENST00000566560 FAM162BQ5T6X4 162 aa8.26□□□□□ -1.09
KARS-207ENST00000566560 PRR27Q6MZM9 219 aa8.26□□□□□ -1.09
KARS-207ENST00000566560 FAM159AQ6UWV7 190 aa8.26□□□□□ -1.09
KARS-207ENST00000566560 COX8CQ7Z4L0 72 aa8.26□□□□□ -1.09
KARS-207ENST00000566560 EIF4E3Q8N5X7 224 aaKnown RBP8.26□□□□□ -1.09
KARS-207ENST00000566560 TMEM263Q8WUH6 116 aaKnown RBP8.26□□□□□ -1.09
KARS-207ENST00000566560 SMIM12Q96EX1 92 aa8.26□□□□□ -1.09
KARS-207ENST00000566560 C16orf74Q96GX8 76 aa8.26□□□□□ -1.09
KARS-207ENST00000566560 SMIM7Q9BQ49 75 aa8.26□□□□□ -1.09
KARS-207ENST00000566560 LINC00467Q9BRT7 94 aa8.26□□□□□ -1.09
KARS-207ENST00000566560 SMDT1Q9H4I9 107 aa8.26□□□□□ -1.09
KARS-207ENST00000566560 TGP01266 2768 aa8.26□□□□□ -1.09
KARS-207ENST00000566560 COL7A1Q02388 2944 aa8.26□□□□□ -1.09
KARS-207ENST00000566560 TMEM189A5PLL7 270 aa8.25□□□□□ -1.09
KARS-207ENST00000566560 PGPEP1LA6NFU8 196 aa8.25□□□□□ -1.09
KARS-207ENST00000566560 C9JQL5 133 aa8.25□□□□□ -1.09
KARS-207ENST00000566560 AZU1P20160 251 aa8.25□□□□□ -1.09
KARS-207ENST00000566560 RNASE8Q8TDE3 154 aaKnown RBP8.25□□□□□ -1.09
KARS-207ENST00000566560 MLST8Q9BVC4 326 aa8.25□□□□□ -1.09
KARS-207ENST00000566560 SDF2L1Q9HCN8 221 aa8.25□□□□□ -1.09
KARS-207ENST00000566560 TRGV11A0A075B6L2 103 aa8.24□□□□□ -1.09
KARS-207ENST00000566560 FABP5P3A8MUU1 101 aa8.24□□□□□ -1.09
KARS-207ENST00000566560 ZNF727A8MUV8 499 aa8.24□□□□□ -1.09
KARS-207ENST00000566560 IGLV2-8P01709 118 aa8.24□□□□□ -1.09
KARS-207ENST00000566560 ANXA2RQ3ZCQ2 193 aa8.24□□□□□ -1.09
KARS-207ENST00000566560 XP32Q5T750 250 aa8.24□□□□□ -1.09
KARS-207ENST00000566560 ZNF493Q6ZR52 646 aa8.24□□□□□ -1.09
KARS-207ENST00000566560 KCNS1Q96KK3 526 aa8.24□□□□□ -1.09
KARS-207ENST00000566560 EDA2RQ9HAV5 297 aa8.24□□□□□ -1.09
KARS-207ENST00000566560 PLAC8L1A1L4L8 177 aa8.23□□□□□ -1.09
KARS-207ENST00000566560 SNURFLB1AK76 121 aa8.23□□□□□ -1.09
KARS-207ENST00000566560 M0R036 132 aa8.23□□□□□ -1.09
KARS-207ENST00000566560 TYMSP04818 313 aa8.23□□□□□ -1.09
KARS-207ENST00000566560 CRIP1P50238 77 aa8.23□□□□□ -1.09
KARS-207ENST00000566560 ZNF415Q09FC8 603 aa8.23□□□□□ -1.09
KARS-207ENST00000566560 TDRG1Q3Y452 100 aa8.23□□□□□ -1.09
KARS-207ENST00000566560 COMMD7Q86VX2 200 aa8.23□□□□□ -1.09
KARS-207ENST00000566560 BIN3Q9NQY0 253 aa8.23□□□□□ -1.09
KARS-207ENST00000566560 C11orf21Q9P2W6 132 aa8.23□□□□□ -1.09
KARS-207ENST00000566560 TP53TG3Q9ULZ0 132 aa8.23□□□□□ -1.09
KARS-207ENST00000566560 TEX48A0A1B0GUV7 120 aa8.22□□□□□ -1.09
KARS-207ENST00000566560 B4DEV8 164 aa8.22□□□□□ -1.09
KARS-207ENST00000566560 ORM1P02763 201 aa8.22□□□□□ -1.09
KARS-207ENST00000566560 SFTA3P0C7M3 94 aa8.22□□□□□ -1.09
KARS-207ENST00000566560 FAM74A3Q4VXF1 159 aa8.22□□□□□ -1.09
KARS-207ENST00000566560 SOHLH1Q5JUK2 328 aa8.22□□□□□ -1.09
KARS-207ENST00000566560 IBA57Q5T440 356 aaKnown RBP8.22□□□□□ -1.09
KARS-207ENST00000566560 FAM222AQ5U5X8 452 aa8.22□□□□□ -1.09
KARS-207ENST00000566560 C11orf72Q8NBR9 251 aa8.22□□□□□ -1.09
KARS-207ENST00000566560 GSN-AS1Q9NRJ2 163 aa8.22□□□□□ -1.09
KARS-207ENST00000566560 CELA1Q9UNI1 258 aa8.22□□□□□ -1.09
KARS-207ENST00000566560 IGKV3D-20A0A0C4DH25 116 aa8.21□□□□□ -1.1
KARS-207ENST00000566560 K7EN84 100 aa8.21□□□□□ -1.1
KARS-207ENST00000566560 TCL1AP56279 114 aa8.21□□□□□ -1.1
KARS-207ENST00000566560 OR5I1Q13606 314 aa8.21□□□□□ -1.1
KARS-207ENST00000566560 UQCC3Q6UW78 93 aa8.21□□□□□ -1.1
KARS-207ENST00000566560 IL17DQ8TAD2 202 aa8.21□□□□□ -1.1
KARS-207ENST00000566560 NOP10Q9NPE3 64 aaKnown RBP8.21□□□□□ -1.1
KARS-207ENST00000566560 DKK2Q9UBU2 259 aa8.21□□□□□ -1.1
KARS-207ENST00000566560 TIMM8BQ9Y5J9 83 aaPredicted RBP8.21□□□□□ -1.1
KARS-207ENST00000566560 LY96Q9Y6Y9 160 aa8.21□□□□□ -1.1
KARS-207ENST00000566560 TMSB15BA0A087X1C1 80 aa8.2□□□□□ -1.1
KARS-207ENST00000566560 IGHV3-16A0A0C4DH30 117 aa8.2□□□□□ -1.1
KARS-207ENST00000566560 LINC00862A6NCI5 91 aa8.2□□□□□ -1.1
KARS-207ENST00000566560 CXorf65A6NEN9 183 aa8.2□□□□□ -1.1
KARS-207ENST00000566560 LYRM9A8MSI8 78 aa8.2□□□□□ -1.1
KARS-207ENST00000566560 GNRH2O43555 120 aa8.2□□□□□ -1.1
KARS-207ENST00000566560 SPART-AS1P0CW21 52 aa8.2□□□□□ -1.1
KARS-207ENST00000566560 ASIPP42127 132 aa8.2□□□□□ -1.1
KARS-207ENST00000566560 RPL19P84098 196 aaKnown RBP8.2□□□□□ -1.1
KARS-207ENST00000566560 LINC01551Q86U37 167 aa8.2□□□□□ -1.1
KARS-207ENST00000566560 OCC1Q8TAD7 63 aa8.2□□□□□ -1.1
KARS-207ENST00000566560 C11orf45Q8TAV5 145 aa8.2□□□□□ -1.1
KARS-207ENST00000566560 DAZAP1Q96EP5 407 aaKnown RBP8.2□□□□□ -1.1
KARS-207ENST00000566560 MDFICQ9P1T7 246 aa8.2□□□□□ -1.1
KARS-207ENST00000566560 NAT8Q9UHE5 227 aa8.2□□□□□ -1.1
KARS-207ENST00000566560 C19orf71A6NCJ1 209 aa8.19□□□□□ -1.1
KARS-207ENST00000566560 KRBOX1C9JBD0 128 aa8.19□□□□□ -1.1
KARS-207ENST00000566560 P01737 135 aa8.19□□□□□ -1.1
KARS-207ENST00000566560 S100A4P26447 101 aaKnown RBP8.19□□□□□ -1.1
KARS-207ENST00000566560 NANOS2P60321 138 aaKnown RBP8.19□□□□□ -1.1
KARS-207ENST00000566560 DAZ2Q13117 558 aaKnown RBP8.19□□□□□ -1.1
KARS-207ENST00000566560 ADIRFQ15847 76 aa8.19□□□□□ -1.1
KARS-207ENST00000566560 TMEM241Q24JQ0 296 aa8.19□□□□□ -1.1
KARS-207ENST00000566560 WWC2-AS2Q96NR7 200 aa8.19□□□□□ -1.1
KARS-207ENST00000566560 TRGV1A0A0A0MS02 117 aa8.18□□□□□ -1.1
KARS-207ENST00000566560 GRIFINA4D1Z8 144 aa8.18□□□□□ -1.1
KARS-207ENST00000566560 H3BVH4 76 aa8.18□□□□□ -1.1
KARS-207ENST00000566560 DAD1P61803 113 aa8.18□□□□□ -1.1
KARS-207ENST00000566560 OR2D3Q8NGH3 330 aa8.18□□□□□ -1.1
KARS-207ENST00000566560 RNASE7Q9H1E1 156 aaKnown RBP8.18□□□□□ -1.1
KARS-207ENST00000566560 MRPL16Q9NX20 251 aaKnown RBP8.18□□□□□ -1.1
KARS-207ENST00000566560 SPINK4O60575 86 aa8.17□□□□□ -1.1
KARS-207ENST00000566560 CXCL1P09341 107 aa8.17□□□□□ -1.1
KARS-207ENST00000566560 DEFB130BP0DP73 79 aa8.17□□□□□ -1.1
KARS-207ENST00000566560 DEFB130AP0DP74 79 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms