RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 KIR3DS1Q14943 382 aa8.7□□□□□ -1.02
RNF40-208ENST00000565995 NFE4Q86UQ8 179 aa8.7□□□□□ -1.02
RNF40-208ENST00000565995 RPH3ALQ9UNE2 315 aa8.7□□□□□ -1.02
RNF40-208ENST00000565995 A0A087WTM6 91 aa8.69□□□□□ -1.02
RNF40-208ENST00000565995 SNURFLB1AK76 121 aa8.69□□□□□ -1.02
RNF40-208ENST00000565995 PAGE4O60829 102 aa8.69□□□□□ -1.02
RNF40-208ENST00000565995 BCL2P10415 239 aa8.69□□□□□ -1.02
RNF40-208ENST00000565995 FUSP35637 526 aaKnown RBP eCLIP8.69□□□□□ -1.02
RNF40-208ENST00000565995 ICAM4Q14773 271 aa8.69□□□□□ -1.02
RNF40-208ENST00000565995 TOR2AQ5JU69 321 aa8.69□□□□□ -1.02
RNF40-208ENST00000565995 GFI1BQ5VTD9 330 aa8.69□□□□□ -1.02
RNF40-208ENST00000565995 EXOC3-AS1Q8N2X6 119 aa8.69□□□□□ -1.02
RNF40-208ENST00000565995 CMTM2Q8TAZ6 248 aa8.69□□□□□ -1.02
RNF40-208ENST00000565995 EIF5A2Q9GZV4 153 aaKnown RBP8.69□□□□□ -1.02
RNF40-208ENST00000565995 ZNF331Q9NQX6 463 aaPredicted RBP8.69□□□□□ -1.02
RNF40-208ENST00000565995 FAM74A7A6NL05 159 aa8.68□□□□□ -1.02
RNF40-208ENST00000565995 FAM229AH3BQW9 127 aa8.68□□□□□ -1.02
RNF40-208ENST00000565995 K7EP13 123 aa8.68□□□□□ -1.02
RNF40-208ENST00000565995 ZNF253O75346 499 aa8.68□□□□□ -1.02
RNF40-208ENST00000565995 NDUFB4O95168 129 aa8.68□□□□□ -1.02
RNF40-208ENST00000565995 SLC25A5P05141 298 aaKnown RBP8.68□□□□□ -1.02
RNF40-208ENST00000565995 Q6ZTI0 123 aa8.68□□□□□ -1.02
RNF40-208ENST00000565995 LYPD6BQ8NI32 183 aa8.68□□□□□ -1.02
RNF40-208ENST00000565995 ODF3Q96PU9 254 aa8.68□□□□□ -1.02
RNF40-208ENST00000565995 OTORQ9NRC9 128 aa8.68□□□□□ -1.02
RNF40-208ENST00000565995 DNAH8Q96JB1 4490 aa8.68□□□□□ -1.02
RNF40-208ENST00000565995 A0A1W2PRE2 83 aa8.67□□□□□ -1.02
RNF40-208ENST00000565995 PGPA6NDG6 321 aa8.67□□□□□ -1.02
RNF40-208ENST00000565995 RBFOX3A6NFN3 312 aa8.67□□□□□ -1.02
RNF40-208ENST00000565995 GGTLC3B5MD39 225 aa8.67□□□□□ -1.02
RNF40-208ENST00000565995 TAGLN2P37802 199 aaKnown RBP8.67□□□□□ -1.02
RNF40-208ENST00000565995 CSN1S1P47710 185 aa8.67□□□□□ -1.02
RNF40-208ENST00000565995 SUN5Q8TC36 379 aa8.67□□□□□ -1.02
RNF40-208ENST00000565995 PYGO2Q9BRQ0 406 aa8.67□□□□□ -1.02
RNF40-208ENST00000565995 MDFICQ9P1T7 246 aa8.67□□□□□ -1.02
RNF40-208ENST00000565995 VAX2Q9UIW0 290 aa8.67□□□□□ -1.02
RNF40-208ENST00000565995 TNFRSF18Q9Y5U5 241 aa8.67□□□□□ -1.02
RNF40-208ENST00000565995 ARL2-SNX15V9GYD0 113 aa8.67□□□□□ -1.02
RNF40-208ENST00000565995 ZNF324O75467 553 aaPredicted RBP8.66□□□□□ -1.02
RNF40-208ENST00000565995 NXPH4O95158 308 aa8.66□□□□□ -1.02
RNF40-208ENST00000565995 SMR3BP02814 79 aaPredicted RBP8.66□□□□□ -1.02
RNF40-208ENST00000565995 PRB4P10163 310 aaPredicted RBP8.66□□□□□ -1.02
RNF40-208ENST00000565995 GCSHP23434 173 aa8.66□□□□□ -1.02
RNF40-208ENST00000565995 SUMO1P63165 101 aaKnown RBP8.66□□□□□ -1.02
RNF40-208ENST00000565995 GNG5P63218 68 aa8.66□□□□□ -1.02
RNF40-208ENST00000565995 MEF2BQ02080 365 aaPredicted RBP8.66□□□□□ -1.02
RNF40-208ENST00000565995 COMMD7Q86VX2 200 aa8.66□□□□□ -1.02
RNF40-208ENST00000565995 C5orf17Q8NAS9 161 aa8.66□□□□□ -1.02
RNF40-208ENST00000565995 C11orf72Q8NBR9 251 aa8.66□□□□□ -1.02
RNF40-208ENST00000565995 FAM210AQ96ND0 272 aa8.66□□□□□ -1.02
RNF40-208ENST00000565995 LINC00467Q9BRT7 94 aa8.66□□□□□ -1.02
RNF40-208ENST00000565995 NKX6-2Q9C056 277 aaPredicted RBP8.66□□□□□ -1.02
RNF40-208ENST00000565995 PRAC2D3DTV9 90 aa8.65□□□□□ -1.02
RNF40-208ENST00000565995 M0R3E3 92 aa8.65□□□□□ -1.02
RNF40-208ENST00000565995 DNAH10OSP0CZ25 163 aa8.65□□□□□ -1.02
RNF40-208ENST00000565995 CEBPGP53567 150 aa8.65□□□□□ -1.02
RNF40-208ENST00000565995 ZNF506Q5JVG8 444 aa8.65□□□□□ -1.02
RNF40-208ENST00000565995 TMEM70Q9BUB7 260 aa8.65□□□□□ -1.02
RNF40-208ENST00000565995 PRELID1Q9Y255 219 aa8.65□□□□□ -1.02
RNF40-208ENST00000565995 TRAV9-2A0A087WT02 112 aa8.64□□□□□ -1.03
RNF40-208ENST00000565995 F6UZH7 168 aa8.64□□□□□ -1.03
RNF40-208ENST00000565995 K7EQM0 130 aa8.64□□□□□ -1.03
RNF40-208ENST00000565995 CT45A10P0DMU9 189 aa8.64□□□□□ -1.03
RNF40-208ENST00000565995 PEA15Q15121 130 aa8.64□□□□□ -1.03
RNF40-208ENST00000565995 LYPD5Q6UWN5 251 aa8.64□□□□□ -1.03
RNF40-208ENST00000565995 Q6ZSN1 163 aa8.64□□□□□ -1.03
RNF40-208ENST00000565995 MRPL53Q96EL3 112 aaKnown RBP8.64□□□□□ -1.03
RNF40-208ENST00000565995 TXNDC17Q9BRA2 123 aa8.64□□□□□ -1.03
RNF40-208ENST00000565995 TREM1Q9NP99 234 aa8.64□□□□□ -1.03
RNF40-208ENST00000565995 ICOSQ9Y6W8 199 aa8.64□□□□□ -1.03
RNF40-208ENST00000565995 TRAV12-3A0A0B4J271 114 aa8.63□□□□□ -1.03
RNF40-208ENST00000565995 SCO2A0A1W2PP80 73 aa8.63□□□□□ -1.03
RNF40-208ENST00000565995 NPIPB6E9PJ23 425 aa8.63□□□□□ -1.03
RNF40-208ENST00000565995 PEX7O00628 323 aa8.63□□□□□ -1.03
RNF40-208ENST00000565995 PDE6DO43924 150 aa8.63□□□□□ -1.03
RNF40-208ENST00000565995 SPINK4O60575 86 aa8.63□□□□□ -1.03
RNF40-208ENST00000565995 LEPP41159 167 aa8.63□□□□□ -1.03
RNF40-208ENST00000565995 AKR1C3P42330 323 aa8.63□□□□□ -1.03
RNF40-208ENST00000565995 ANXA2RQ3ZCQ2 193 aa8.63□□□□□ -1.03
RNF40-208ENST00000565995 GOLT1AQ6ZVE7 132 aa8.63□□□□□ -1.03
RNF40-208ENST00000565995 TCEAL7Q9BRU2 100 aa8.63□□□□□ -1.03
RNF40-208ENST00000565995 TRGV2A0A075B6R0 118 aa8.62□□□□□ -1.03
RNF40-208ENST00000565995 IGKV2-40A0A087WW87 121 aaPredicted RBP8.62□□□□□ -1.03
RNF40-208ENST00000565995 RAB19A4D1S5 217 aa8.62□□□□□ -1.03
RNF40-208ENST00000565995 KRTAP29-1A8MX34 341 aaPredicted RBP8.62□□□□□ -1.03
RNF40-208ENST00000565995 J3QL48 77 aa8.62□□□□□ -1.03
RNF40-208ENST00000565995 PAX4O43316 350 aa8.62□□□□□ -1.03
RNF40-208ENST00000565995 IGKV2D-40P01614 121 aaPredicted RBP8.62□□□□□ -1.03
RNF40-208ENST00000565995 TCRAP04437 139 aa8.62□□□□□ -1.03
RNF40-208ENST00000565995 UBE2G1P62253 170 aa8.62□□□□□ -1.03
RNF40-208ENST00000565995 SLAQ13239 276 aa8.62□□□□□ -1.03
RNF40-208ENST00000565995 CYB561D1Q8N8Q1 229 aa8.62□□□□□ -1.03
RNF40-208ENST00000565995 HIST1H2BAQ96A08 127 aa8.62□□□□□ -1.03
RNF40-208ENST00000565995 GSN-AS1Q9NRJ2 163 aa8.62□□□□□ -1.03
RNF40-208ENST00000565995 MED9Q9NWA0 146 aa8.62□□□□□ -1.03
RNF40-208ENST00000565995 MSRB1Q9NZV6 116 aa8.62□□□□□ -1.03
RNF40-208ENST00000565995 PRO0255Q9UI72 69 aa8.62□□□□□ -1.03
RNF40-208ENST00000565995 EPDR1Q9UM22 224 aa8.62□□□□□ -1.03
RNF40-208ENST00000565995 LINC00862A6NCI5 91 aa8.61□□□□□ -1.03
RNF40-208ENST00000565995 KLLNB2CW77 178 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms