RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 PCNPQ8WW12 178 aaKnown RBP8.33□□□□□ -1.08
GTF3C1-204ENST00000564664 KCNS1Q96KK3 526 aa8.33□□□□□ -1.08
GTF3C1-204ENST00000564664 TXNDC17Q9BRA2 123 aa8.33□□□□□ -1.08
GTF3C1-204ENST00000564664 C9JCJ5 164 aa8.32□□□□□ -1.08
GTF3C1-204ENST00000564664 K7EQD1 137 aa8.32□□□□□ -1.08
GTF3C1-204ENST00000564664 MBP02144 154 aa8.32□□□□□ -1.08
GTF3C1-204ENST00000564664 CDPF1Q6NVV7 123 aa8.32□□□□□ -1.08
GTF3C1-204ENST00000564664 Q8N1X5 172 aa8.32□□□□□ -1.08
GTF3C1-204ENST00000564664 MAPKAPK5-AS1Q8N8E1 139 aa8.32□□□□□ -1.08
GTF3C1-204ENST00000564664 OR10G9Q8NGN4 311 aa8.32□□□□□ -1.08
GTF3C1-204ENST00000564664 OR10G7Q8NGN6 311 aa8.32□□□□□ -1.08
GTF3C1-204ENST00000564664 OR2G3Q8NGZ4 309 aa8.32□□□□□ -1.08
GTF3C1-204ENST00000564664 WFDC1Q9HC57 220 aa8.32□□□□□ -1.08
GTF3C1-204ENST00000564664 TREM1Q9NP99 234 aa8.32□□□□□ -1.08
GTF3C1-204ENST00000564664 LY96Q9Y6Y9 160 aa8.32□□□□□ -1.08
GTF3C1-204ENST00000564664 HSPG2P98160 4391 aa8.32□□□□□ -1.08
GTF3C1-204ENST00000564664 IGHV3-16A0A0C4DH30 117 aa8.31□□□□□ -1.08
GTF3C1-204ENST00000564664 K7EQM0 130 aa8.31□□□□□ -1.08
GTF3C1-204ENST00000564664 GYPEP15421 78 aa8.31□□□□□ -1.08
GTF3C1-204ENST00000564664 EVI2AP22794 236 aa8.31□□□□□ -1.08
GTF3C1-204ENST00000564664 TIRAPP58753 221 aa8.31□□□□□ -1.08
GTF3C1-204ENST00000564664 KRTAP10-2P60368 255 aa8.31□□□□□ -1.08
GTF3C1-204ENST00000564664 ERVFC1-1P60608 527 aa8.31□□□□□ -1.08
GTF3C1-204ENST00000564664 SERF2P84101 59 aa8.31□□□□□ -1.08
GTF3C1-204ENST00000564664 GOLT1AQ6ZVE7 132 aa8.31□□□□□ -1.08
GTF3C1-204ENST00000564664 OR4C5Q8NGB2 326 aa8.31□□□□□ -1.08
GTF3C1-204ENST00000564664 SUN5Q8TC36 379 aa8.31□□□□□ -1.08
GTF3C1-204ENST00000564664 ZNF479Q96JC4 524 aa8.31□□□□□ -1.08
GTF3C1-204ENST00000564664 KRTAP4-5Q9BYR2 181 aa8.31□□□□□ -1.08
GTF3C1-204ENST00000564664 SDF2L1Q9HCN8 221 aa8.31□□□□□ -1.08
GTF3C1-204ENST00000564664 FBLL1A6NHQ2 334 aaKnown RBP8.3□□□□□ -1.08
GTF3C1-204ENST00000564664 GNRH2O43555 120 aa8.3□□□□□ -1.08
GTF3C1-204ENST00000564664 SFTA3P0C7M3 94 aa8.3□□□□□ -1.08
GTF3C1-204ENST00000564664 C10orf126Q8N4M7 172 aa8.3□□□□□ -1.08
GTF3C1-204ENST00000564664 NDFIP1Q9BT67 221 aa8.3□□□□□ -1.08
GTF3C1-204ENST00000564664 PSMG3Q9BT73 122 aaPredicted RBP8.3□□□□□ -1.08
GTF3C1-204ENST00000564664 NAGKQ9UJ70 344 aa8.3□□□□□ -1.08
GTF3C1-204ENST00000564664 DNAH5Q8TE73 4624 aa8.3□□□□□ -1.08
GTF3C1-204ENST00000564664 TAAR5O14804 337 aa8.29□□□□□ -1.08
GTF3C1-204ENST00000564664 PFN1P07737 140 aaKnown RBP8.29□□□□□ -1.08
GTF3C1-204ENST00000564664 STAG3L2P0CL84 134 aa8.29□□□□□ -1.08
GTF3C1-204ENST00000564664 STAG3L3P0CL85 134 aa8.29□□□□□ -1.08
GTF3C1-204ENST00000564664 DNAH10OSP0CZ25 163 aa8.29□□□□□ -1.08
GTF3C1-204ENST00000564664 CDC34P49427 236 aaPredicted RBP8.29□□□□□ -1.08
GTF3C1-204ENST00000564664 RAB2AP61019 212 aa8.29□□□□□ -1.08
GTF3C1-204ENST00000564664 C5orf17Q8NAS9 161 aa8.29□□□□□ -1.08
GTF3C1-204ENST00000564664 PTH2Q96A98 100 aa8.29□□□□□ -1.08
GTF3C1-204ENST00000564664 TVP23CQ96ET8 276 aa8.29□□□□□ -1.08
GTF3C1-204ENST00000564664 AQP10Q96PS8 301 aa8.29□□□□□ -1.08
GTF3C1-204ENST00000564664 MSRB1Q9NZV6 116 aa8.29□□□□□ -1.08
GTF3C1-204ENST00000564664 RPH3ALQ9UNE2 315 aa8.29□□□□□ -1.08
GTF3C1-204ENST00000564664 TYMSP04818 313 aa8.28□□□□□ -1.08
GTF3C1-204ENST00000564664 GIPP09681 153 aaPredicted RBP8.28□□□□□ -1.08
GTF3C1-204ENST00000564664 NKX2-5P52952 324 aaPredicted RBP8.28□□□□□ -1.08
GTF3C1-204ENST00000564664 SCRT2Q9NQ03 307 aa8.28□□□□□ -1.08
GTF3C1-204ENST00000564664 TMEM167BQ9NRX6 74 aa8.28□□□□□ -1.08
GTF3C1-204ENST00000564664 TNFSF18Q9UNG2 199 aa8.28□□□□□ -1.08
GTF3C1-204ENST00000564664 CXorf1O96002 111 aa8.27□□□□□ -1.09
GTF3C1-204ENST00000564664 TCRAP04437 139 aa8.27□□□□□ -1.09
GTF3C1-204ENST00000564664 ARL14EPLP0DKL9 152 aa8.27□□□□□ -1.09
GTF3C1-204ENST00000564664 GATA1P15976 413 aaPredicted RBP8.27□□□□□ -1.09
GTF3C1-204ENST00000564664 GCHFRP30047 84 aa8.27□□□□□ -1.09
GTF3C1-204ENST00000564664 SAPCD1Q5SSQ6 148 aa8.27□□□□□ -1.09
GTF3C1-204ENST00000564664 RAB24Q969Q5 203 aa8.27□□□□□ -1.09
GTF3C1-204ENST00000564664 TRAV8-1A0A0A6YYK1 113 aa8.26□□□□□ -1.09
GTF3C1-204ENST00000564664 TRBV6-4A0A1B0GX49 114 aa8.26□□□□□ -1.09
GTF3C1-204ENST00000564664 HMSDA8MTL9 139 aa8.26□□□□□ -1.09
GTF3C1-204ENST00000564664 HMGB3O15347 200 aaKnown RBP8.26□□□□□ -1.09
GTF3C1-204ENST00000564664 RS1O15537 224 aa8.26□□□□□ -1.09
GTF3C1-204ENST00000564664 ATP6V0CP27449 155 aa8.26□□□□□ -1.09
GTF3C1-204ENST00000564664 ZNF876PQ49A33 203 aa8.26□□□□□ -1.09
GTF3C1-204ENST00000564664 SMUG1Q53HV7 270 aa8.26□□□□□ -1.09
GTF3C1-204ENST00000564664 C9orf62Q8N4C0 152 aa8.26□□□□□ -1.09
GTF3C1-204ENST00000564664 HSD17B11Q8NBQ5 300 aa8.26□□□□□ -1.09
GTF3C1-204ENST00000564664 PRADC1Q9BSG0 188 aa8.26□□□□□ -1.09
GTF3C1-204ENST00000564664 ACTR3CQ9C0K3 210 aaPredicted RBP8.26□□□□□ -1.09
GTF3C1-204ENST00000564664 SH3BGRL3Q9H299 93 aa8.26□□□□□ -1.09
GTF3C1-204ENST00000564664 EPDR1Q9UM22 224 aa8.26□□□□□ -1.09
GTF3C1-204ENST00000564664 PSG8Q9UQ74 426 aa8.26□□□□□ -1.09
GTF3C1-204ENST00000564664 A0A087WTM6 91 aa8.25□□□□□ -1.09
GTF3C1-204ENST00000564664 IGHV3-38A0A0C4DH36 116 aa8.25□□□□□ -1.09
GTF3C1-204ENST00000564664 F6UZH7 168 aa8.25□□□□□ -1.09
GTF3C1-204ENST00000564664 EIF3GO75821 320 aaKnown RBP eCLIP8.25□□□□□ -1.09
GTF3C1-204ENST00000564664 CRYGDP07320 174 aa8.25□□□□□ -1.09
GTF3C1-204ENST00000564664 SUMO1P63165 101 aaKnown RBP8.25□□□□□ -1.09
GTF3C1-204ENST00000564664 GNG5P63218 68 aa8.25□□□□□ -1.09
GTF3C1-204ENST00000564664 PIK3CD-AS1Q5SR53 167 aa8.25□□□□□ -1.09
GTF3C1-204ENST00000564664 TMEM75Q8N9X5 138 aa8.25□□□□□ -1.09
GTF3C1-204ENST00000564664 INO80EQ8NBZ0 244 aaPredicted RBP8.25□□□□□ -1.09
GTF3C1-204ENST00000564664 TNFRSF18Q9Y5U5 241 aa8.25□□□□□ -1.09
GTF3C1-204ENST00000564664 APOBP04114 4563 aaKnown RBP8.24□□□□□ -1.09
GTF3C1-204ENST00000564664 BORCS7-ASMTA0A0B4J1R7 106 aa8.24□□□□□ -1.09
GTF3C1-204ENST00000564664 TRAV8-6A0A0B4J262 113 aa8.24□□□□□ -1.09
GTF3C1-204ENST00000564664 A0A1W2PRE2 83 aa8.24□□□□□ -1.09
GTF3C1-204ENST00000564664 GCGP01275 180 aa8.24□□□□□ -1.09
GTF3C1-204ENST00000564664 PPT1P50897 306 aa8.24□□□□□ -1.09
GTF3C1-204ENST00000564664 FLI1Q01543 452 aaPredicted RBP8.24□□□□□ -1.09
GTF3C1-204ENST00000564664 RHOHQ15669 191 aa8.24□□□□□ -1.09
GTF3C1-204ENST00000564664 Q5BKY6 102 aa8.24□□□□□ -1.09
GTF3C1-204ENST00000564664 LINC01556Q5JQF7 62 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms