RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 TRAV12-1A0A0B4J245 112 aa12.66□□□□□ -0.38
TPM1-228ENST00000560975 A6NJY4 79 aa12.66□□□□□ -0.38
TPM1-228ENST00000560975 EMP1P54849 157 aa12.66□□□□□ -0.38
TPM1-228ENST00000560975 C5orf64Q2M2E5 130 aa12.66□□□□□ -0.38
TPM1-228ENST00000560975 A0A0G2JNJ9 132 aa12.66□□□□□ -0.38
TPM1-228ENST00000560975 Q9UFV3 132 aa12.66□□□□□ -0.38
TPM1-228ENST00000560975 SVEP1Q4LDE5 3571 aa12.65□□□□□ -0.38
TPM1-228ENST00000560975 E7EQL1 145 aa12.65□□□□□ -0.38
TPM1-228ENST00000560975 LINC01619G3V211 115 aa12.65□□□□□ -0.38
TPM1-228ENST00000560975 ZNF672Q499Z4 452 aaPredicted RBP12.65□□□□□ -0.38
TPM1-228ENST00000560975 NEXN-AS1Q8NBZ9 246 aa12.65□□□□□ -0.38
TPM1-228ENST00000560975 PPDPFLQ8WWR9 84 aa12.65□□□□□ -0.38
TPM1-228ENST00000560975 RPL39LQ96EH5 51 aaKnown RBP12.65□□□□□ -0.38
TPM1-228ENST00000560975 TCL1BO95988 128 aa12.65□□□□□ -0.38
TPM1-228ENST00000560975 ANAPC13Q9BS18 74 aa12.65□□□□□ -0.38
TPM1-228ENST00000560975 MED13LQ71F56 2210 aa12.65□□□□□ -0.38
TPM1-228ENST00000560975 LRBAP50851 2863 aa12.64□□□□□ -0.39
TPM1-228ENST00000560975 M0R381 172 aa12.64□□□□□ -0.39
TPM1-228ENST00000560975 HIF1ANQ9NWT6 349 aa12.64□□□□□ -0.39
TPM1-228ENST00000560975 UBE2D1P51668 147 aa12.64□□□□□ -0.39
TPM1-228ENST00000560975 TEN1Q86WV5 123 aa12.64□□□□□ -0.39
TPM1-228ENST00000560975 BAALCQ8WXS3 180 aa12.64□□□□□ -0.39
TPM1-228ENST00000560975 DPM3Q9P2X0 92 aa12.64□□□□□ -0.39
TPM1-228ENST00000560975 ERG28Q9UKR5 140 aa12.64□□□□□ -0.39
TPM1-228ENST00000560975 ABCA4P78363 2273 aa12.64□□□□□ -0.39
TPM1-228ENST00000560975 PLA2G2CQ5R387 149 aa12.63□□□□□ -0.39
TPM1-228ENST00000560975 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.63□□□□□ -0.39
TPM1-228ENST00000560975 RASL10AQ92737 203 aa12.63□□□□□ -0.39
TPM1-228ENST00000560975 PIEZO2Q9H5I5 2752 aa12.63□□□□□ -0.39
TPM1-228ENST00000560975 C2orf66Q6UXQ4 117 aa12.63□□□□□ -0.39
TPM1-228ENST00000560975 TOMM6Q96B49 74 aa12.63□□□□□ -0.39
TPM1-228ENST00000560975 SCGB1C2P0DMR2 95 aa12.62□□□□□ -0.39
TPM1-228ENST00000560975 UBE2D3P61077 147 aa12.62□□□□□ -0.39
TPM1-228ENST00000560975 UBE2D2P62837 147 aa12.62□□□□□ -0.39
TPM1-228ENST00000560975 ORMDL2Q53FV1 153 aa12.62□□□□□ -0.39
TPM1-228ENST00000560975 Q6ZS92 163 aa12.62□□□□□ -0.39
TPM1-228ENST00000560975 MSRB2Q9Y3D2 182 aa12.62□□□□□ -0.39
TPM1-228ENST00000560975 DCHS2Q6V1P9 2916 aa12.62□□□□□ -0.39
TPM1-228ENST00000560975 SUMO2P61956 95 aaKnown RBP12.62□□□□□ -0.39
TPM1-228ENST00000560975 ANKRD29Q8N6D5 301 aa12.61□□□□□ -0.39
TPM1-228ENST00000560975 NPBQ8NG41 125 aa12.61□□□□□ -0.39
TPM1-228ENST00000560975 FAM57AQ8TBR7 257 aa12.61□□□□□ -0.39
TPM1-228ENST00000560975 FAM90A27PA6NNH2 459 aa12.61□□□□□ -0.39
TPM1-228ENST00000560975 A8MWV9 139 aa12.61□□□□□ -0.39
TPM1-228ENST00000560975 MGPP08493 103 aa12.61□□□□□ -0.39
TPM1-228ENST00000560975 CD7P09564 240 aa12.61□□□□□ -0.39
TPM1-228ENST00000560975 ANXA2RQ3ZCQ2 193 aa12.61□□□□□ -0.39
TPM1-228ENST00000560975 NDUFA11Q86Y39 141 aa12.61□□□□□ -0.39
TPM1-228ENST00000560975 BUB3O43684 328 aa12.6□□□□□ -0.39
TPM1-228ENST00000560975 C14orf178Q8N769 122 aaPredicted RBP12.6□□□□□ -0.39
TPM1-228ENST00000560975 IGF1P05019 195 aa12.6□□□□□ -0.39
TPM1-228ENST00000560975 ZNF688P0C7X2 276 aa12.6□□□□□ -0.39
TPM1-228ENST00000560975 OR11H6Q8NGC7 330 aa12.6□□□□□ -0.39
TPM1-228ENST00000560975 SLC50A1Q9BRV3 221 aa12.6□□□□□ -0.39
TPM1-228ENST00000560975 SCGB2A1O75556 95 aa12.59□□□□□ -0.39
TPM1-228ENST00000560975 LY6HO94772 140 aa12.59□□□□□ -0.39
TPM1-228ENST00000560975 CLEC3BP05452 202 aa12.59□□□□□ -0.39
TPM1-228ENST00000560975 PRR9Q5T870 116 aa12.59□□□□□ -0.39
TPM1-228ENST00000560975 COX6B1P14854 86 aa12.59□□□□□ -0.39
TPM1-228ENST00000560975 PRTN3P24158 256 aa12.59□□□□□ -0.39
TPM1-228ENST00000560975 Q6ZS46 218 aa12.59□□□□□ -0.39
TPM1-228ENST00000560975 B5MCH6 92 aa12.59□□□□□ -0.39
TPM1-228ENST00000560975 ZFAND6Q6FIF0 208 aa12.59□□□□□ -0.39
TPM1-228ENST00000560975 DEFB124Q8NES8 71 aa12.59□□□□□ -0.39
TPM1-228ENST00000560975 TRAV8-2A0A0B4J237 113 aa12.58□□□□□ -0.4
TPM1-228ENST00000560975 RBAKDNA6NC62 111 aa12.58□□□□□ -0.4
TPM1-228ENST00000560975 C15orf32Q32M92 178 aa12.58□□□□□ -0.4
TPM1-228ENST00000560975 TEX29Q8N6K0 151 aa12.58□□□□□ -0.4
TPM1-228ENST00000560975 DUSP14O95147 198 aaKnown RBP12.58□□□□□ -0.4
TPM1-228ENST00000560975 ECSCRQ19T08 205 aa12.58□□□□□ -0.4
TPM1-228ENST00000560975 LYRM7Q5U5X0 104 aa12.58□□□□□ -0.4
TPM1-228ENST00000560975 ACACAQ13085 2346 aa12.57□□□□□ -0.4
TPM1-228ENST00000560975 C11orf86A6NJI1 115 aa12.57□□□□□ -0.4
TPM1-228ENST00000560975 CFC1BP0CG36 223 aa12.57□□□□□ -0.4
TPM1-228ENST00000560975 CFC1P0CG37 223 aa12.57□□□□□ -0.4
TPM1-228ENST00000560975 H7C2G1 150 aa12.57□□□□□ -0.4
TPM1-228ENST00000560975 S100A4P26447 101 aaKnown RBP12.57□□□□□ -0.4
TPM1-228ENST00000560975 RAX2Q96IS3 184 aa12.57□□□□□ -0.4
TPM1-228ENST00000560975 A0A0J9YY99 117 aa12.56□□□□□ -0.4
TPM1-228ENST00000560975 ZFAND3Q9H8U3 227 aa12.56□□□□□ -0.4
TPM1-228ENST00000560975 CLEC19AQ6UXS0 136 aa12.56□□□□□ -0.4
TPM1-228ENST00000560975 BDP1A6H8Y1 2624 aa12.56□□□□□ -0.4
TPM1-228ENST00000560975 IGHV4-4A0A075B6R2 117 aa12.55□□□□□ -0.4
TPM1-228ENST00000560975 ARL3P36405 182 aa12.55□□□□□ -0.4
TPM1-228ENST00000560975 CRIP2P52943 208 aaPredicted RBP12.55□□□□□ -0.4
TPM1-228ENST00000560975 DEFB1P60022 68 aa12.55□□□□□ -0.4
TPM1-228ENST00000560975 TRPT1Q86TN4 253 aaKnown RBP12.55□□□□□ -0.4
TPM1-228ENST00000560975 C9JAW5 83 aa12.55□□□□□ -0.4
TPM1-228ENST00000560975 CRYGDP07320 174 aa12.55□□□□□ -0.4
TPM1-228ENST00000560975 GAGE5Q13069 117 aa12.55□□□□□ -0.4
TPM1-228ENST00000560975 GAGE6Q13070 117 aa12.55□□□□□ -0.4
TPM1-228ENST00000560975 CLPSL1A2RUU4 121 aa12.54□□□□□ -0.4
TPM1-228ENST00000560975 TSPEAR-AS2P59090 65 aa12.54□□□□□ -0.4
TPM1-228ENST00000560975 COLQQ9Y215 455 aaPredicted RBP12.54□□□□□ -0.4
TPM1-228ENST00000560975 TRBV20-1A0A075B6N2 111 aa12.54□□□□□ -0.4
TPM1-228ENST00000560975 IGHV7-81A0A0B4J1V7 117 aa12.54□□□□□ -0.4
TPM1-228ENST00000560975 TMEM170BQ5T4T1 132 aa12.54□□□□□ -0.4
TPM1-228ENST00000560975 PHLDA3Q9Y5J5 127 aa12.54□□□□□ -0.4
TPM1-228ENST00000560975 RNF223E7ERA6 249 aa12.53□□□□□ -0.4
TPM1-228ENST00000560975 C10orf126Q8N4M7 172 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms