RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 MRPS16Q9Y3D3 137 aaKnown RBP7.01□□□□□ -1.29
USP3-207ENST00000558218 DNAH10Q8IVF4 4471 aa7□□□□□ -1.29
USP3-207ENST00000558218 TRAV21A0A0B4J279 112 aa7□□□□□ -1.29
USP3-207ENST00000558218 A0A0J9YY99 117 aa7□□□□□ -1.29
USP3-207ENST00000558218 K7EQM0 130 aa7□□□□□ -1.29
USP3-207ENST00000558218 CXorf1O96002 111 aa7□□□□□ -1.29
USP3-207ENST00000558218 ATP6V0CP27449 155 aa7□□□□□ -1.29
USP3-207ENST00000558218 HSD17B11Q8NBQ5 300 aa7□□□□□ -1.29
USP3-207ENST00000558218 Q8TAT8 98 aa7□□□□□ -1.29
USP3-207ENST00000558218 RAB24Q969Q5 203 aa7□□□□□ -1.29
USP3-207ENST00000558218 KCNS1Q96KK3 526 aa7□□□□□ -1.29
USP3-207ENST00000558218 HYLS1Q96M11 299 aa7□□□□□ -1.29
USP3-207ENST00000558218 ACTR3CQ9C0K3 210 aaPredicted RBP7□□□□□ -1.29
USP3-207ENST00000558218 TMEM167BQ9NRX6 74 aa7□□□□□ -1.29
USP3-207ENST00000558218 HHLA3Q9XRX5 114 aa7□□□□□ -1.29
USP3-207ENST00000558218 A0A096LPF7 62 aa6.99□□□□□ -1.29
USP3-207ENST00000558218 BORCS7-ASMTA0A0B4J1R7 106 aa6.99□□□□□ -1.29
USP3-207ENST00000558218 CIDEAO60543 219 aa6.99□□□□□ -1.29
USP3-207ENST00000558218 ARL14EPLP0DKL9 152 aa6.99□□□□□ -1.29
USP3-207ENST00000558218 MRPL23Q16540 153 aaKnown RBP6.99□□□□□ -1.29
USP3-207ENST00000558218 GOLT1AQ6ZVE7 132 aa6.99□□□□□ -1.29
USP3-207ENST00000558218 C5orf17Q8NAS9 161 aa6.99□□□□□ -1.29
USP3-207ENST00000558218 NDFIP1Q9BT67 221 aa6.99□□□□□ -1.29
USP3-207ENST00000558218 TREM1Q9NP99 234 aa6.99□□□□□ -1.29
USP3-207ENST00000558218 K7EP13 123 aa6.98□□□□□ -1.29
USP3-207ENST00000558218 TAAR5O14804 337 aa6.98□□□□□ -1.29
USP3-207ENST00000558218 TCRAP04437 139 aa6.98□□□□□ -1.29
USP3-207ENST00000558218 GCHFRP30047 84 aa6.98□□□□□ -1.29
USP3-207ENST00000558218 CRYBA4P53673 196 aa6.98□□□□□ -1.29
USP3-207ENST00000558218 FHL2Q14192 279 aa6.98□□□□□ -1.29
USP3-207ENST00000558218 RGS21Q2M5E4 152 aa6.98□□□□□ -1.29
USP3-207ENST00000558218 Q5BKY6 102 aa6.98□□□□□ -1.29
USP3-207ENST00000558218 MUC21Q5SSG8 566 aa6.98□□□□□ -1.29
USP3-207ENST00000558218 SAPCD1Q5SSQ6 148 aa6.98□□□□□ -1.29
USP3-207ENST00000558218 Q6ZQT7 251 aa6.98□□□□□ -1.29
USP3-207ENST00000558218 NKX6-2Q9C056 277 aaPredicted RBP6.98□□□□□ -1.29
USP3-207ENST00000558218 MDFICQ9P1T7 246 aa6.98□□□□□ -1.29
USP3-207ENST00000558218 ICOSQ9Y6W8 199 aa6.98□□□□□ -1.29
USP3-207ENST00000558218 A0A1W2PRE2 83 aa6.97□□□□□ -1.29
USP3-207ENST00000558218 M0R2P5 195 aa6.97□□□□□ -1.29
USP3-207ENST00000558218 ORM1P02763 201 aa6.97□□□□□ -1.29
USP3-207ENST00000558218 TMEM183BQ1AE95 376 aa6.97□□□□□ -1.29
USP3-207ENST00000558218 TMEM183AQ8IXX5 376 aa6.97□□□□□ -1.29
USP3-207ENST00000558218 OR2T35Q8NGX2 323 aa6.97□□□□□ -1.29
USP3-207ENST00000558218 TVP23CQ96ET8 276 aa6.97□□□□□ -1.29
USP3-207ENST00000558218 MRPL16Q9NX20 251 aaKnown RBP6.97□□□□□ -1.29
USP3-207ENST00000558218 EPDR1Q9UM22 224 aa6.97□□□□□ -1.29
USP3-207ENST00000558218 TRAV4A0A0B4J268 109 aa6.96□□□□□ -1.3
USP3-207ENST00000558218 TRGV4A0A0C4DH28 118 aa6.96□□□□□ -1.3
USP3-207ENST00000558218 IGHV3-16A0A0C4DH30 117 aa6.96□□□□□ -1.3
USP3-207ENST00000558218 RNF222A6NCQ9 220 aa6.96□□□□□ -1.3
USP3-207ENST00000558218 HMGB3O15347 200 aaKnown RBP6.96□□□□□ -1.3
USP3-207ENST00000558218 SUMO1P63165 101 aaKnown RBP6.96□□□□□ -1.3
USP3-207ENST00000558218 NEGR1Q7Z3B1 354 aa6.96□□□□□ -1.3
USP3-207ENST00000558218 SH2D6Q7Z4S9 175 aa6.96□□□□□ -1.3
USP3-207ENST00000558218 PTH2Q96A98 100 aa6.96□□□□□ -1.3
USP3-207ENST00000558218 SDF2L1Q9HCN8 221 aa6.96□□□□□ -1.3
USP3-207ENST00000558218 PSG8Q9UQ74 426 aa6.96□□□□□ -1.3
USP3-207ENST00000558218 FXYD6-FXYD2A0A087WZ82 144 aa6.95□□□□□ -1.3
USP3-207ENST00000558218 TRAV8-1A0A0A6YYK1 113 aa6.95□□□□□ -1.3
USP3-207ENST00000558218 CTXND1A0A1B0GTU2 59 aa6.95□□□□□ -1.3
USP3-207ENST00000558218 SIVA1O15304 175 aa6.95□□□□□ -1.3
USP3-207ENST00000558218 GNRH2O43555 120 aa6.95□□□□□ -1.3
USP3-207ENST00000558218 EIF3GO75821 320 aaKnown RBP eCLIP6.95□□□□□ -1.3
USP3-207ENST00000558218 PFN1P07737 140 aaKnown RBP6.95□□□□□ -1.3
USP3-207ENST00000558218 FLI1Q01543 452 aaPredicted RBP6.95□□□□□ -1.3
USP3-207ENST00000558218 RPL7L1Q6DKI1 246 aaKnown RBP6.95□□□□□ -1.3
USP3-207ENST00000558218 LYPD5Q6UWN5 251 aa6.95□□□□□ -1.3
USP3-207ENST00000558218 CYB561D1Q8N8Q1 229 aa6.95□□□□□ -1.3
USP3-207ENST00000558218 TMEM75Q8N9X5 138 aa6.95□□□□□ -1.3
USP3-207ENST00000558218 C8orf49Q96NF6 230 aa6.95□□□□□ -1.3
USP3-207ENST00000558218 SH3BGRL3Q9H299 93 aa6.95□□□□□ -1.3
USP3-207ENST00000558218 RPH3ALQ9UNE2 315 aa6.95□□□□□ -1.3
USP3-207ENST00000558218 RYR1P21817 5038 aa6.94□□□□□ -1.3
USP3-207ENST00000558218 TRAV9-2A0A087WT02 112 aa6.94□□□□□ -1.3
USP3-207ENST00000558218 IGLV2-11P01706 119 aa6.94□□□□□ -1.3
USP3-207ENST00000558218 IGHV3-53P01767 116 aa6.94□□□□□ -1.3
USP3-207ENST00000558218 TYMSP04818 313 aa6.94□□□□□ -1.3
USP3-207ENST00000558218 PPT1P50897 306 aa6.94□□□□□ -1.3
USP3-207ENST00000558218 GNG5P63218 68 aa6.94□□□□□ -1.3
USP3-207ENST00000558218 ZFP69Q49AA0 526 aa6.94□□□□□ -1.3
USP3-207ENST00000558218 SMUG1Q53HV7 270 aa6.94□□□□□ -1.3
USP3-207ENST00000558218 PIK3CD-AS1Q5SR53 167 aa6.94□□□□□ -1.3
USP3-207ENST00000558218 OR4C5Q8NGB2 326 aa6.94□□□□□ -1.3
USP3-207ENST00000558218 PCNPQ8WW12 178 aaKnown RBP6.94□□□□□ -1.3
USP3-207ENST00000558218 ZNF479Q96JC4 524 aa6.94□□□□□ -1.3
USP3-207ENST00000558218 TXNDC17Q9BRA2 123 aa6.94□□□□□ -1.3
USP3-207ENST00000558218 NAGKQ9UJ70 344 aa6.94□□□□□ -1.3
USP3-207ENST00000558218 GGTLC3B5MD39 225 aa6.93□□□□□ -1.3
USP3-207ENST00000558218 C9JCJ5 164 aa6.93□□□□□ -1.3
USP3-207ENST00000558218 K7EQD1 137 aa6.93□□□□□ -1.3
USP3-207ENST00000558218 SRIP30626 198 aa6.93□□□□□ -1.3
USP3-207ENST00000558218 TIRAPP58753 221 aa6.93□□□□□ -1.3
USP3-207ENST00000558218 AKR1C8PQ5T2L2 129 aa6.93□□□□□ -1.3
USP3-207ENST00000558218 HIST1H2BAQ96A08 127 aa6.93□□□□□ -1.3
USP3-207ENST00000558218 TCEAL7Q9BRU2 100 aa6.93□□□□□ -1.3
USP3-207ENST00000558218 HECTD4Q9Y4D8 3996 aa6.93□□□□□ -1.3
USP3-207ENST00000558218 DNAH17Q9UFH2 4485 aa6.92□□□□□ -1.3
USP3-207ENST00000558218 FABP5P3A8MUU1 101 aa6.92□□□□□ -1.3
USP3-207ENST00000558218 F6UZH7 168 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms