RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 NOP10Q9NPE3 64 aaKnown RBP9.76□□□□□ -0.85
SHMT2-234ENST00000557703 CELA1Q9UNI1 258 aa9.76□□□□□ -0.85
SHMT2-234ENST00000557703 RPL35P42766 123 aaKnown RBP9.75□□□□□ -0.85
SHMT2-234ENST00000557703 ZNF506Q5JVG8 444 aa9.75□□□□□ -0.85
SHMT2-234ENST00000557703 C8orf49Q96NF6 230 aa9.75□□□□□ -0.85
SHMT2-234ENST00000557703 MED9Q9NWA0 146 aa9.75□□□□□ -0.85
SHMT2-234ENST00000557703 TENM2Q9NT68 2774 aa9.74□□□□□ -0.85
SHMT2-234ENST00000557703 ATP5G1P05496 136 aa9.74□□□□□ -0.85
SHMT2-234ENST00000557703 PIK3CD-AS1Q5SR53 167 aa9.74□□□□□ -0.85
SHMT2-234ENST00000557703 DNLZQ5SXM8 178 aa9.74□□□□□ -0.85
SHMT2-234ENST00000557703 Q6ZTC4 211 aa9.74□□□□□ -0.85
SHMT2-234ENST00000557703 RASL10AQ92737 203 aa9.74□□□□□ -0.85
SHMT2-234ENST00000557703 PTH2Q96A98 100 aa9.74□□□□□ -0.85
SHMT2-234ENST00000557703 FAM210AQ96ND0 272 aa9.74□□□□□ -0.85
SHMT2-234ENST00000557703 GSN-AS1Q9NRJ2 163 aa9.74□□□□□ -0.85
SHMT2-234ENST00000557703 CSMD3Q7Z407 3707 aa9.74□□□□□ -0.85
SHMT2-234ENST00000557703 DEFB131BA0A096LNP1 70 aa9.73□□□□□ -0.85
SHMT2-234ENST00000557703 CIDEAO60543 219 aa9.73□□□□□ -0.85
SHMT2-234ENST00000557703 SPINK4O60575 86 aa9.73□□□□□ -0.85
SHMT2-234ENST00000557703 PRM2P04554 102 aa9.73□□□□□ -0.85
SHMT2-234ENST00000557703 ZNF80P51504 273 aaPredicted RBP9.73□□□□□ -0.85
SHMT2-234ENST00000557703 RAB14P61106 215 aa9.73□□□□□ -0.85
SHMT2-234ENST00000557703 MUC21Q5SSG8 566 aa9.73□□□□□ -0.85
SHMT2-234ENST00000557703 ZNF767PQ75MW2 155 aa9.73□□□□□ -0.85
SHMT2-234ENST00000557703 ZC2HC1AQ96GY0 325 aa9.73□□□□□ -0.85
SHMT2-234ENST00000557703 EIF5A2Q9GZV4 153 aaKnown RBP9.73□□□□□ -0.85
SHMT2-234ENST00000557703 IGHV3-16A0A0C4DH30 117 aa9.72□□□□□ -0.85
SHMT2-234ENST00000557703 C9JCJ5 164 aa9.72□□□□□ -0.85
SHMT2-234ENST00000557703 M0R2P5 195 aa9.72□□□□□ -0.85
SHMT2-234ENST00000557703 CXCL1P09341 107 aa9.72□□□□□ -0.85
SHMT2-234ENST00000557703 GNG4P50150 75 aa9.72□□□□□ -0.85
SHMT2-234ENST00000557703 SLAQ13239 276 aa9.72□□□□□ -0.85
SHMT2-234ENST00000557703 LINC01559Q495D7 138 aa9.72□□□□□ -0.85
SHMT2-234ENST00000557703 ZFAND6Q6FIF0 208 aa9.72□□□□□ -0.85
SHMT2-234ENST00000557703 NAGKQ9UJ70 344 aa9.72□□□□□ -0.85
SHMT2-234ENST00000557703 ORM1P02763 201 aa9.71□□□□□ -0.86
SHMT2-234ENST00000557703 TYMSP04818 313 aa9.71□□□□□ -0.86
SHMT2-234ENST00000557703 DEFB130BP0DP73 79 aa9.71□□□□□ -0.86
SHMT2-234ENST00000557703 DEFB130AP0DP74 79 aa9.71□□□□□ -0.86
SHMT2-234ENST00000557703 Q6ZQT7 251 aa9.71□□□□□ -0.86
SHMT2-234ENST00000557703 IL36BQ9NZH7 164 aa9.71□□□□□ -0.86
SHMT2-234ENST00000557703 LY96Q9Y6Y9 160 aa9.71□□□□□ -0.86
SHMT2-234ENST00000557703 MUC4Q99102 2169 aa9.7□□□□□ -0.86
SHMT2-234ENST00000557703 TRGV2A0A075B6R0 118 aa9.7□□□□□ -0.86
SHMT2-234ENST00000557703 B4DEV8 164 aa9.7□□□□□ -0.86
SHMT2-234ENST00000557703 SH2D1AO60880 128 aa9.7□□□□□ -0.86
SHMT2-234ENST00000557703 S100A4P26447 101 aaKnown RBP9.7□□□□□ -0.86
SHMT2-234ENST00000557703 CRIP1P50238 77 aa9.7□□□□□ -0.86
SHMT2-234ENST00000557703 PEA15Q15121 130 aa9.7□□□□□ -0.86
SHMT2-234ENST00000557703 C15orf53Q8NAA6 179 aa9.7□□□□□ -0.86
SHMT2-234ENST00000557703 DAZAP1Q96EP5 407 aaKnown RBP9.7□□□□□ -0.86
SHMT2-234ENST00000557703 MDFICQ9P1T7 246 aa9.7□□□□□ -0.86
SHMT2-234ENST00000557703 TRGV1A0A0A0MS02 117 aa9.69□□□□□ -0.86
SHMT2-234ENST00000557703 IGKV3D-20A0A0C4DH25 116 aa9.69□□□□□ -0.86
SHMT2-234ENST00000557703 XKRY2A2RUG3 117 aa9.69□□□□□ -0.86
SHMT2-234ENST00000557703 KRBOX1C9JBD0 128 aa9.69□□□□□ -0.86
SHMT2-234ENST00000557703 H3BNG1 76 aa9.69□□□□□ -0.86
SHMT2-234ENST00000557703 GNRH2O43555 120 aa9.69□□□□□ -0.86
SHMT2-234ENST00000557703 ASIPP42127 132 aa9.69□□□□□ -0.86
SHMT2-234ENST00000557703 FAM74A3Q4VXF1 159 aa9.69□□□□□ -0.86
SHMT2-234ENST00000557703 CENPWQ5EE01 88 aa9.69□□□□□ -0.86
SHMT2-234ENST00000557703 TOR2AQ5JU69 321 aa9.69□□□□□ -0.86
SHMT2-234ENST00000557703 C9orf85Q96MD7 179 aa9.69□□□□□ -0.86
SHMT2-234ENST00000557703 DERL1Q9BUN8 251 aa9.69□□□□□ -0.86
SHMT2-234ENST00000557703 C11orf21Q9P2W6 132 aa9.69□□□□□ -0.86
SHMT2-234ENST00000557703 GAGE12BA1L429 117 aa9.68□□□□□ -0.86
SHMT2-234ENST00000557703 GAGE7O76087 117 aa9.68□□□□□ -0.86
SHMT2-234ENST00000557703 GAGE12FP0CL80 117 aa9.68□□□□□ -0.86
SHMT2-234ENST00000557703 GAGE12GP0CL81 117 aa9.68□□□□□ -0.86
SHMT2-234ENST00000557703 GAGE12IP0CL82 117 aa9.68□□□□□ -0.86
SHMT2-234ENST00000557703 MED14OSP0DP75 135 aa9.68□□□□□ -0.86
SHMT2-234ENST00000557703 RPS20P60866 119 aaKnown RBP9.68□□□□□ -0.86
SHMT2-234ENST00000557703 Q6ZTI0 123 aa9.68□□□□□ -0.86
SHMT2-234ENST00000557703 IGLL5B9A064 214 aa9.67□□□□□ -0.86
SHMT2-234ENST00000557703 IGLV2-8P01709 118 aa9.67□□□□□ -0.86
SHMT2-234ENST00000557703 PARLQ9H300 379 aa9.67□□□□□ -0.86
SHMT2-234ENST00000557703 TRBV20OR9-2A0A075B6H5 130 aa9.66□□□□□ -0.86
SHMT2-234ENST00000557703 IGHV4-4A0A075B6R2 117 aa9.66□□□□□ -0.86
SHMT2-234ENST00000557703 TRAV4A0A0B4J268 109 aa9.66□□□□□ -0.86
SHMT2-234ENST00000557703 F5H768 121 aa9.66□□□□□ -0.86
SHMT2-234ENST00000557703 RNASE3P12724 160 aaKnown RBP9.66□□□□□ -0.86
SHMT2-234ENST00000557703 ZNF876PQ49A33 203 aa9.66□□□□□ -0.86
SHMT2-234ENST00000557703 CLLU1Q5K131 121 aa9.66□□□□□ -0.86
SHMT2-234ENST00000557703 SYT8Q8NBV8 401 aa9.66□□□□□ -0.86
SHMT2-234ENST00000557703 RAB19A4D1S5 217 aa9.65□□□□□ -0.86
SHMT2-234ENST00000557703 C19orf71A6NCJ1 209 aa9.65□□□□□ -0.86
SHMT2-234ENST00000557703 MGST1P10620 155 aaKnown RBP9.65□□□□□ -0.86
SHMT2-234ENST00000557703 OR5I1Q13606 314 aa9.65□□□□□ -0.86
SHMT2-234ENST00000557703 LGALS9CQ6DKI2 356 aa9.65□□□□□ -0.86
SHMT2-234ENST00000557703 NHLRC2Q8NBF2 726 aa9.65□□□□□ -0.86
SHMT2-234ENST00000557703 SMIM7Q9BQ49 75 aa9.65□□□□□ -0.86
SHMT2-234ENST00000557703 SCRT2Q9NQ03 307 aa9.65□□□□□ -0.86
SHMT2-234ENST00000557703 A8MWV9 139 aa9.64□□□□□ -0.87
SHMT2-234ENST00000557703 P01737 135 aa9.64□□□□□ -0.87
SHMT2-234ENST00000557703 SRP19P09132 144 aaKnown RBP9.64□□□□□ -0.87
SHMT2-234ENST00000557703 OR5AL1P0C617 328 aa9.64□□□□□ -0.87
SHMT2-234ENST00000557703 HTN3P15516 51 aa9.64□□□□□ -0.87
SHMT2-234ENST00000557703 PRR27Q6MZM9 219 aa9.64□□□□□ -0.87
SHMT2-234ENST00000557703 SSBP4Q9BWG4 385 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-234ENST00000557703 PRO0255Q9UI72 69 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms