RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 FAM231BA6NCW3 169 aa9.2□□□□□ -0.94
SHMT2-230ENST00000557427 IFITM10A6NMD0 228 aa9.2□□□□□ -0.94
SHMT2-230ENST00000557427 A8MWL6 223 aa9.2□□□□□ -0.94
SHMT2-230ENST00000557427 M0R3E3 92 aa9.2□□□□□ -0.94
SHMT2-230ENST00000557427 P01737 135 aa9.2□□□□□ -0.94
SHMT2-230ENST00000557427 S100A2P29034 98 aa9.2□□□□□ -0.94
SHMT2-230ENST00000557427 COX8CQ7Z4L0 72 aa9.2□□□□□ -0.94
SHMT2-230ENST00000557427 GBGT1Q8N5D6 347 aa9.2□□□□□ -0.94
SHMT2-230ENST00000557427 DAZAP1Q96EP5 407 aaKnown RBP9.2□□□□□ -0.94
SHMT2-230ENST00000557427 C12orf57Q99622 126 aa9.2□□□□□ -0.94
SHMT2-230ENST00000557427 RHPN1-AS1Q9BWJ2 59 aa9.2□□□□□ -0.94
SHMT2-230ENST00000557427 GFRA4Q9GZZ7 299 aa9.2□□□□□ -0.94
SHMT2-230ENST00000557427 SMPXQ9UHP9 88 aa9.2□□□□□ -0.94
SHMT2-230ENST00000557427 KLK5Q9Y337 293 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-230ENST00000557427 IGKV3-7A0A075B6H7 116 aa9.19□□□□□ -0.94
SHMT2-230ENST00000557427 IGHV7-4-1A0A0J9YVY3 117 aa9.19□□□□□ -0.94
SHMT2-230ENST00000557427 SNURFLB1AK76 121 aa9.19□□□□□ -0.94
SHMT2-230ENST00000557427 CA1P00915 261 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-230ENST00000557427 HLA-DQA1P01909 254 aa9.19□□□□□ -0.94
SHMT2-230ENST00000557427 TCL1AP56279 114 aa9.19□□□□□ -0.94
SHMT2-230ENST00000557427 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.19□□□□□ -0.94
SHMT2-230ENST00000557427 TMEM136Q6ZRR5 245 aa9.19□□□□□ -0.94
SHMT2-230ENST00000557427 ATP5L2Q7Z4Y8 100 aa9.19□□□□□ -0.94
SHMT2-230ENST00000557427 CLEC5AQ9NY25 188 aa9.19□□□□□ -0.94
SHMT2-230ENST00000557427 IGHV3-66A0A0C4DH42 116 aa9.18□□□□□ -0.94
SHMT2-230ENST00000557427 CHEK1O14757 476 aa9.18□□□□□ -0.94
SHMT2-230ENST00000557427 TFPI2P48307 235 aa9.18□□□□□ -0.94
SHMT2-230ENST00000557427 SAPCD1Q5SSQ6 148 aa9.18□□□□□ -0.94
SHMT2-230ENST00000557427 GFI1BQ5VTD9 330 aa9.18□□□□□ -0.94
SHMT2-230ENST00000557427 NUP35Q8NFH5 326 aa9.18□□□□□ -0.94
SHMT2-230ENST00000557427 MRPL53Q96EL3 112 aaKnown RBP9.18□□□□□ -0.94
SHMT2-230ENST00000557427 ZC2HC1AQ96GY0 325 aa9.18□□□□□ -0.94
SHMT2-230ENST00000557427 NEU1Q99519 415 aa9.18□□□□□ -0.94
SHMT2-230ENST00000557427 RBAKDNA6NC62 111 aa9.17□□□□□ -0.94
SHMT2-230ENST00000557427 APOHP02749 345 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-230ENST00000557427 WFDC3Q8IUB2 231 aa9.17□□□□□ -0.94
SHMT2-230ENST00000557427 GLMPQ8WWB7 406 aa9.17□□□□□ -0.94
SHMT2-230ENST00000557427 SPAG8Q99932 426 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-230ENST00000557427 A0A1B0GXF2 115 aa9.16□□□□□ -0.94
SHMT2-230ENST00000557427 A0A1W2PS18 150 aa9.16□□□□□ -0.94
SHMT2-230ENST00000557427 HIGD1CA8MV81 97 aa9.16□□□□□ -0.94
SHMT2-230ENST00000557427 SPINK4O60575 86 aa9.16□□□□□ -0.94
SHMT2-230ENST00000557427 CT45A10P0DMU9 189 aa9.16□□□□□ -0.94
SHMT2-230ENST00000557427 FOXA3P55318 350 aaPredicted RBP9.16□□□□□ -0.94
SHMT2-230ENST00000557427 RPL11P62913 178 aaKnown RBP9.16□□□□□ -0.94
SHMT2-230ENST00000557427 Q0VG73 95 aa9.16□□□□□ -0.94
SHMT2-230ENST00000557427 MRPL54Q6P161 138 aaKnown RBP9.16□□□□□ -0.94
SHMT2-230ENST00000557427 LINC00336Q6ZUF6 198 aa9.16□□□□□ -0.94
SHMT2-230ENST00000557427 HIST1H2BLQ99880 126 aa9.16□□□□□ -0.94
SHMT2-230ENST00000557427 IGKV2-40A0A087WW87 121 aaPredicted RBP9.15□□□□□ -0.94
SHMT2-230ENST00000557427 LOC102724200A0A096LPH7 203 aaPredicted RBP9.15□□□□□ -0.94
SHMT2-230ENST00000557427 OR4C46A6NHA9 309 aa9.15□□□□□ -0.94
SHMT2-230ENST00000557427 IGKV2D-40P01614 121 aaPredicted RBP9.15□□□□□ -0.94
SHMT2-230ENST00000557427 CRISP2P16562 243 aa9.15□□□□□ -0.94
SHMT2-230ENST00000557427 TCF24Q7RTU0 167 aa9.15□□□□□ -0.94
SHMT2-230ENST00000557427 OR2D3Q8NGH3 330 aa9.15□□□□□ -0.94
SHMT2-230ENST00000557427 PHLDA1Q8WV24 401 aaPredicted RBP9.15□□□□□ -0.94
SHMT2-230ENST00000557427 GTSF1Q8WW33 167 aa9.15□□□□□ -0.94
SHMT2-230ENST00000557427 TRAV8-2A0A0B4J237 113 aa9.14□□□□□ -0.95
SHMT2-230ENST00000557427 AMBPP02760 352 aa9.14□□□□□ -0.95
SHMT2-230ENST00000557427 ESDP10768 282 aa9.14□□□□□ -0.95
SHMT2-230ENST00000557427 FABP4P15090 132 aa9.14□□□□□ -0.95
SHMT2-230ENST00000557427 RPL35AP18077 110 aaKnown RBP9.14□□□□□ -0.95
SHMT2-230ENST00000557427 HLA-DMBP28068 263 aa9.14□□□□□ -0.95
SHMT2-230ENST00000557427 CRIP1P50238 77 aa9.14□□□□□ -0.95
SHMT2-230ENST00000557427 RAB4BP61018 213 aa9.14□□□□□ -0.95
SHMT2-230ENST00000557427 PDZD11Q5EBL8 140 aa9.14□□□□□ -0.95
SHMT2-230ENST00000557427 OR10J3Q5JRS4 329 aa9.14□□□□□ -0.95
SHMT2-230ENST00000557427 DNLZQ5SXM8 178 aa9.14□□□□□ -0.95
SHMT2-230ENST00000557427 Q6AWC8 147 aa9.14□□□□□ -0.95
SHMT2-230ENST00000557427 APRG1Q8IVJ8 170 aa9.14□□□□□ -0.95
SHMT2-230ENST00000557427 OR10D4PQ8NGN7 298 aa9.14□□□□□ -0.95
SHMT2-230ENST00000557427 TMEM18Q96B42 140 aa9.14□□□□□ -0.95
SHMT2-230ENST00000557427 C8orf49Q96NF6 230 aa9.14□□□□□ -0.95
SHMT2-230ENST00000557427 NDFIP1Q9BT67 221 aa9.14□□□□□ -0.95
SHMT2-230ENST00000557427 APCSP02743 223 aa9.13□□□□□ -0.95
SHMT2-230ENST00000557427 PAFAH1B2P68402 229 aa9.13□□□□□ -0.95
SHMT2-230ENST00000557427 HBBP68871 147 aa9.13□□□□□ -0.95
SHMT2-230ENST00000557427 ZNF124Q15973 351 aa9.13□□□□□ -0.95
SHMT2-230ENST00000557427 ODF3L2Q3SX64 289 aa9.13□□□□□ -0.95
SHMT2-230ENST00000557427 PACRGQ96M98 296 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-230ENST00000557427 VGLL1Q99990 258 aa9.13□□□□□ -0.95
SHMT2-230ENST00000557427 PPP1R14DQ9NXH3 145 aa9.13□□□□□ -0.95
SHMT2-230ENST00000557427 ZNF705FA8MVS1 300 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-230ENST00000557427 BMI1P35226 326 aa9.12□□□□□ -0.95
SHMT2-230ENST00000557427 RPS20P60866 119 aaKnown RBP9.12□□□□□ -0.95
SHMT2-230ENST00000557427 FAM162BQ5T6X4 162 aa9.12□□□□□ -0.95
SHMT2-230ENST00000557427 GDF5OSQ5U4N7 250 aa9.12□□□□□ -0.95
SHMT2-230ENST00000557427 IGFL4Q6B9Z1 124 aa9.12□□□□□ -0.95
SHMT2-230ENST00000557427 GATD1Q8NB37 220 aa9.12□□□□□ -0.95
SHMT2-230ENST00000557427 PGLYRP4Q96LB8 373 aa9.12□□□□□ -0.95
SHMT2-230ENST00000557427 MS4A6AQ9H2W1 248 aa9.12□□□□□ -0.95
SHMT2-230ENST00000557427 TP53TG3Q9ULZ0 132 aa9.12□□□□□ -0.95
SHMT2-230ENST00000557427 A0A1B0GW15 77 aa9.11□□□□□ -0.95
SHMT2-230ENST00000557427 GRIFINA4D1Z8 144 aa9.11□□□□□ -0.95
SHMT2-230ENST00000557427 PRAC2D3DTV9 90 aa9.11□□□□□ -0.95
SHMT2-230ENST00000557427 SH2D1AO60880 128 aa9.11□□□□□ -0.95
SHMT2-230ENST00000557427 CMC4P56277 68 aaPredicted RBP9.11□□□□□ -0.95
SHMT2-230ENST00000557427 PYY3Q5JQD4 70 aa9.11□□□□□ -0.95
SHMT2-230ENST00000557427 C9orf47Q6ZRZ4 202 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 347.3 ms