RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 LINC01356Q8N9X3 169 aa7.12□□□□□ -1.27
SYNE3-205ENST00000557275 EIF4EBP2Q13542 120 aaPredicted RBP7.12□□□□□ -1.27
SYNE3-205ENST00000557275 JMJD1CQ15652 2540 aa7.12□□□□□ -1.27
SYNE3-205ENST00000557275 CRYGBP07316 175 aa7.12□□□□□ -1.27
SYNE3-205ENST00000557275 MRPL51Q4U2R6 128 aaKnown RBP7.12□□□□□ -1.27
SYNE3-205ENST00000557275 Q6ZUT4 128 aa7.12□□□□□ -1.27
SYNE3-205ENST00000557275 MRPL53Q96EL3 112 aaKnown RBP7.12□□□□□ -1.27
SYNE3-205ENST00000557275 MSRB2Q9Y3D2 182 aa7.12□□□□□ -1.27
SYNE3-205ENST00000557275 TIAF1O95411 115 aa7.12□□□□□ -1.27
SYNE3-205ENST00000557275 MRPL23Q16540 153 aaKnown RBP7.12□□□□□ -1.27
SYNE3-205ENST00000557275 NPSP0C0P6 89 aa7.12□□□□□ -1.27
SYNE3-205ENST00000557275 PAX9P55771 341 aa7.12□□□□□ -1.27
SYNE3-205ENST00000557275 LCNL1Q6ZST4 164 aa7.12□□□□□ -1.27
SYNE3-205ENST00000557275 HOXB4P17483 251 aaPredicted RBP7.12□□□□□ -1.27
SYNE3-205ENST00000557275 TIRAPP58753 221 aa7.12□□□□□ -1.27
SYNE3-205ENST00000557275 REG4Q9BYZ8 158 aa7.12□□□□□ -1.27
SYNE3-205ENST00000557275 WFDC1Q9HC57 220 aa7.12□□□□□ -1.27
SYNE3-205ENST00000557275 RSPO4Q2I0M5 234 aaPredicted RBP7.11□□□□□ -1.27
SYNE3-205ENST00000557275 C17orf77Q96MU5 243 aa7.11□□□□□ -1.27
SYNE3-205ENST00000557275 TMEM178BH3BS89 294 aa7.11□□□□□ -1.27
SYNE3-205ENST00000557275 TM2D2Q9BX73 214 aa7.11□□□□□ -1.27
SYNE3-205ENST00000557275 TRBV19A0A075B6N1 114 aa7.11□□□□□ -1.27
SYNE3-205ENST00000557275 VPREB1P12018 145 aa7.11□□□□□ -1.27
SYNE3-205ENST00000557275 IGKV4-1P06312 121 aa7.11□□□□□ -1.27
SYNE3-205ENST00000557275 H3BUA1 57 aa7.11□□□□□ -1.27
SYNE3-205ENST00000557275 IGHV3-53P01767 116 aa7.11□□□□□ -1.27
SYNE3-205ENST00000557275 TMEM200BQ69YZ2 307 aa7.11□□□□□ -1.27
SYNE3-205ENST00000557275 RPP25Q9BUL9 199 aaKnown RBP7.11□□□□□ -1.27
SYNE3-205ENST00000557275 IMUPQ9GZP8 106 aa7.11□□□□□ -1.27
SYNE3-205ENST00000557275 Q9H8V8 135 aa7.11□□□□□ -1.27
SYNE3-205ENST00000557275 DEFB121Q5J5C9 76 aa7.1□□□□□ -1.27
SYNE3-205ENST00000557275 FAM236DA0A1B0GTK5 79 aa7.1□□□□□ -1.27
SYNE3-205ENST00000557275 FAM236CP0DP71 79 aa7.1□□□□□ -1.27
SYNE3-205ENST00000557275 C3orf56Q8N813 242 aa7.1□□□□□ -1.27
SYNE3-205ENST00000557275 IGLL1P15814 213 aa7.1□□□□□ -1.27
SYNE3-205ENST00000557275 C11orf52Q96A22 123 aa7.1□□□□□ -1.27
SYNE3-205ENST00000557275 J3QRE1 110 aa7.1□□□□□ -1.27
SYNE3-205ENST00000557275 BUB3O43684 328 aa7.1□□□□□ -1.27
SYNE3-205ENST00000557275 IL17DQ8TAD2 202 aa7.1□□□□□ -1.27
SYNE3-205ENST00000557275 CELA2AP08217 269 aa7.1□□□□□ -1.27
SYNE3-205ENST00000557275 FAM110DQ8TAY7 271 aaPredicted RBP7.1□□□□□ -1.27
SYNE3-205ENST00000557275 PRR25Q96S07 402 aa7.1□□□□□ -1.27
SYNE3-205ENST00000557275 UPK3BQ9BT76 320 aa7.1□□□□□ -1.27
SYNE3-205ENST00000557275 LINC01619G3V211 115 aa7.1□□□□□ -1.27
SYNE3-205ENST00000557275 MRPS36P82909 103 aaKnown RBP7.1□□□□□ -1.27
SYNE3-205ENST00000557275 FAM27E3Q08E93 113 aa7.1□□□□□ -1.27
SYNE3-205ENST00000557275 J3QLI3 93 aa7.1□□□□□ -1.27
SYNE3-205ENST00000557275 CSRP1P21291 193 aaKnown RBP7.1□□□□□ -1.27
SYNE3-205ENST00000557275 CYTL1Q9NRR1 136 aa7.1□□□□□ -1.27
SYNE3-205ENST00000557275 SMKR1H3BMG3 65 aa7.1□□□□□ -1.27
SYNE3-205ENST00000557275 C3orf22Q8N5N4 141 aa7.1□□□□□ -1.27
SYNE3-205ENST00000557275 SLC25A45Q8N413 288 aa7.09□□□□□ -1.27
SYNE3-205ENST00000557275 C15orf62A8K5M9 175 aa7.09□□□□□ -1.27
SYNE3-205ENST00000557275 C14orf177Q52M58 125 aa7.09□□□□□ -1.27
SYNE3-205ENST00000557275 NUP210LQ5VU65 1888 aa7.09□□□□□ -1.27
SYNE3-205ENST00000557275 C9orf47Q6ZRZ4 202 aa7.09□□□□□ -1.27
SYNE3-205ENST00000557275 NAV2Q8IVL1 2488 aa7.09□□□□□ -1.27
SYNE3-205ENST00000557275 SND1-IT1Q9HBX3 110 aa7.09□□□□□ -1.27
SYNE3-205ENST00000557275 NXPH4O95158 308 aa7.09□□□□□ -1.27
SYNE3-205ENST00000557275 H3BUX3 64 aa7.09□□□□□ -1.27
SYNE3-205ENST00000557275 TEX22C9J3V5 150 aa7.09□□□□□ -1.27
SYNE3-205ENST00000557275 PKD1L2Q7Z442 2459 aa7.09□□□□□ -1.27
SYNE3-205ENST00000557275 COX7A2LO14548 114 aa7.09□□□□□ -1.27
SYNE3-205ENST00000557275 CLPSP04118 112 aa7.09□□□□□ -1.27
SYNE3-205ENST00000557275 IGHV1-58A0A0C4DH39 117 aa7.09□□□□□ -1.27
SYNE3-205ENST00000557275 FOXF2Q12947 444 aa7.09□□□□□ -1.27
SYNE3-205ENST00000557275 C8orf86Q6ZUL3 223 aa7.09□□□□□ -1.27
SYNE3-205ENST00000557275 LYZL4Q96KX0 146 aa7.09□□□□□ -1.27
SYNE3-205ENST00000557275 RS1O15537 224 aa7.09□□□□□ -1.28
SYNE3-205ENST00000557275 MST1LQ2TV78 715 aa7.09□□□□□ -1.28
SYNE3-205ENST00000557275 PRSS57Q6UWY2 283 aa7.09□□□□□ -1.28
SYNE3-205ENST00000557275 Q8N1Y9 231 aa7.09□□□□□ -1.28
SYNE3-205ENST00000557275 COX7B2Q8TF08 81 aa7.09□□□□□ -1.28
SYNE3-205ENST00000557275 IGLV3-12A0A075B6K2 115 aa7.09□□□□□ -1.28
SYNE3-205ENST00000557275 KIAA1549LQ6ZVL6 1849 aa7.08□□□□□ -1.28
SYNE3-205ENST00000557275 LGALS9O00182 355 aa7.08□□□□□ -1.28
SYNE3-205ENST00000557275 DKK1O94907 266 aa7.08□□□□□ -1.28
SYNE3-205ENST00000557275 LOC101059948A0A1B0GTJ6 334 aa7.08□□□□□ -1.28
SYNE3-205ENST00000557275 ZNRF2Q8NHG8 242 aa7.08□□□□□ -1.28
SYNE3-205ENST00000557275 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.08□□□□□ -1.28
SYNE3-205ENST00000557275 FOXE3Q13461 319 aa7.08□□□□□ -1.28
SYNE3-205ENST00000557275 NDUFV3P56181 108 aaKnown RBP7.08□□□□□ -1.28
SYNE3-205ENST00000557275 C10orf91Q5T1B1 145 aa7.08□□□□□ -1.28
SYNE3-205ENST00000557275 IGKV1-5P01602 117 aa7.08□□□□□ -1.28
SYNE3-205ENST00000557275 NDPQ00604 133 aa7.08□□□□□ -1.28
SYNE3-205ENST00000557275 ANKRD17O75179 2603 aaKnown RBP7.08□□□□□ -1.28
SYNE3-205ENST00000557275 IGLC7A0M8Q6 106 aa7.08□□□□□ -1.28
SYNE3-205ENST00000557275 PATE3B3GLJ2 98 aa7.08□□□□□ -1.28
SYNE3-205ENST00000557275 IGHV1-46P01743 117 aa7.08□□□□□ -1.28
SYNE3-205ENST00000557275 TMEM219Q86XT9 240 aa7.08□□□□□ -1.28
SYNE3-205ENST00000557275 NTF4P34130 210 aa7.08□□□□□ -1.28
SYNE3-205ENST00000557275 V9GYV3 84 aa7.08□□□□□ -1.28
SYNE3-205ENST00000557275 FOXI1Q12951 378 aa7.08□□□□□ -1.28
SYNE3-205ENST00000557275 TRBV10-2A0A0K0K1G8 114 aa7.07□□□□□ -1.28
SYNE3-205ENST00000557275 NDUFA1O15239 70 aa7.07□□□□□ -1.28
SYNE3-205ENST00000557275 NDUFS7O75251 213 aa7.07□□□□□ -1.28
SYNE3-205ENST00000557275 IGHV2-5P01817 119 aa7.07□□□□□ -1.28
SYNE3-205ENST00000557275 CELA3BP08861 270 aa7.07□□□□□ -1.28
SYNE3-205ENST00000557275 ANKRD11Q6UB99 2663 aaPredicted RBP7.07□□□□□ -1.28
SYNE3-205ENST00000557275 IGKV1-9A0A0C4DH69 117 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms