RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 C9orf47Q6ZRZ4 202 aa13.85□□□□□ -0.19
SDR39U1-220ENST00000556548 HAX1O00165 279 aa13.84□□□□□ -0.19
SDR39U1-220ENST00000556548 TCTEX1D4Q5JR98 221 aa13.84□□□□□ -0.19
SDR39U1-220ENST00000556548 TMEM86BQ8N661 226 aa13.84□□□□□ -0.19
SDR39U1-220ENST00000556548 RNF152Q8N8N0 203 aa13.84□□□□□ -0.19
SDR39U1-220ENST00000556548 TMEM238C9JI98 176 aa13.84□□□□□ -0.19
SDR39U1-220ENST00000556548 IGLC3P0DOY3 106 aa13.84□□□□□ -0.19
SDR39U1-220ENST00000556548 SLURP1P55000 103 aa13.84□□□□□ -0.19
SDR39U1-220ENST00000556548 ZNF575Q86XF7 245 aa13.84□□□□□ -0.19
SDR39U1-220ENST00000556548 C11orf44Q8N8P7 122 aa13.84□□□□□ -0.19
SDR39U1-220ENST00000556548 HIST1H1AQ02539 215 aaPredicted RBP13.83□□□□□ -0.2
SDR39U1-220ENST00000556548 OR10J6PQ8NGY7 276 aa13.83□□□□□ -0.2
SDR39U1-220ENST00000556548 CLEC5AQ9NY25 188 aa13.83□□□□□ -0.2
SDR39U1-220ENST00000556548 M0QZ24 198 aa13.82□□□□□ -0.2
SDR39U1-220ENST00000556548 RIGQ13278 110 aa13.82□□□□□ -0.2
SDR39U1-220ENST00000556548 PRR9Q5T870 116 aa13.82□□□□□ -0.2
SDR39U1-220ENST00000556548 C18orf32Q8TCD1 76 aa13.82□□□□□ -0.2
SDR39U1-220ENST00000556548 SAMD10Q9BYL1 202 aa13.82□□□□□ -0.2
SDR39U1-220ENST00000556548 C11orf21Q9P2W6 132 aa13.82□□□□□ -0.2
SDR39U1-220ENST00000556548 TMEM238LA0A1B0GVL6 79 aa13.81□□□□□ -0.2
SDR39U1-220ENST00000556548 RPS20P60866 119 aaKnown RBP13.81□□□□□ -0.2
SDR39U1-220ENST00000556548 OR10J3Q5JRS4 329 aa13.81□□□□□ -0.2
SDR39U1-220ENST00000556548 Q6ZVH6 145 aa13.81□□□□□ -0.2
SDR39U1-220ENST00000556548 OR11H1Q8NG94 326 aa13.81□□□□□ -0.2
SDR39U1-220ENST00000556548 BORCS7Q96B45 105 aa13.81□□□□□ -0.2
SDR39U1-220ENST00000556548 MS4A6AQ9H2W1 248 aa13.81□□□□□ -0.2
SDR39U1-220ENST00000556548 OVOL1O14753 267 aa13.8□□□□□ -0.2
SDR39U1-220ENST00000556548 OCIAD2Q56VL3 154 aa13.8□□□□□ -0.2
SDR39U1-220ENST00000556548 FER1L6-AS1Q8NA97 138 aa13.8□□□□□ -0.2
SDR39U1-220ENST00000556548 DCANP1Q8TF63 244 aa13.8□□□□□ -0.2
SDR39U1-220ENST00000556548 MRPS16Q9Y3D3 137 aaKnown RBP13.8□□□□□ -0.2
SDR39U1-220ENST00000556548 Q6AWC8 147 aa13.8□□□□□ -0.2
SDR39U1-220ENST00000556548 OTOGQ6ZRI0 2925 aa13.8□□□□□ -0.2
SDR39U1-220ENST00000556548 Q8N976 141 aa13.8□□□□□ -0.2
SDR39U1-220ENST00000556548 WFDC12Q8WWY7 111 aa13.8□□□□□ -0.2
SDR39U1-220ENST00000556548 SETD2Q9BYW2 2564 aaPredicted RBP13.8□□□□□ -0.2
SDR39U1-220ENST00000556548 IGKV3D-20A0A0C4DH25 116 aa13.79□□□□□ -0.2
SDR39U1-220ENST00000556548 KRTDAPP60985 99 aa13.79□□□□□ -0.2
SDR39U1-220ENST00000556548 OR8A1Q8NGG7 326 aa13.79□□□□□ -0.2
SDR39U1-220ENST00000556548 CST9LQ9H4G1 147 aa13.79□□□□□ -0.2
SDR39U1-220ENST00000556548 C2orf70A6NJV1 201 aa13.79□□□□□ -0.2
SDR39U1-220ENST00000556548 ZNF688P0C7X2 276 aa13.79□□□□□ -0.2
SDR39U1-220ENST00000556548 PMCHP20382 165 aa13.79□□□□□ -0.2
SDR39U1-220ENST00000556548 HINT1P49773 126 aaPredicted RBP13.79□□□□□ -0.2
SDR39U1-220ENST00000556548 KIR3DS1Q14943 382 aa13.79□□□□□ -0.2
SDR39U1-220ENST00000556548 KLHL30-AS1Q8NEE0 82 aa13.79□□□□□ -0.2
SDR39U1-220ENST00000556548 LOC102724200A0A096LPH7 203 aaPredicted RBP13.78□□□□□ -0.2
SDR39U1-220ENST00000556548 KLF5Q13887 457 aaPredicted RBP13.78□□□□□ -0.2
SDR39U1-220ENST00000556548 LINC00477Q96M19 166 aa13.78□□□□□ -0.2
SDR39U1-220ENST00000556548 A0A1W2PRX2 142 aa13.78□□□□□ -0.2
SDR39U1-220ENST00000556548 LGALS9O00182 355 aa13.78□□□□□ -0.2
SDR39U1-220ENST00000556548 TWIST1Q15672 202 aa13.78□□□□□ -0.2
SDR39U1-220ENST00000556548 LINC01559Q495D7 138 aa13.78□□□□□ -0.2
SDR39U1-220ENST00000556548 FAM19A2Q8N3H0 131 aa13.78□□□□□ -0.2
SDR39U1-220ENST00000556548 DPF1Q92782 380 aa13.78□□□□□ -0.2
SDR39U1-220ENST00000556548 PRSS47A8MTI9 375 aa13.77□□□□□ -0.21
SDR39U1-220ENST00000556548 TSPOP30536 169 aa13.77□□□□□ -0.21
SDR39U1-220ENST00000556548 ID1P41134 155 aa13.77□□□□□ -0.21
SDR39U1-220ENST00000556548 MSRB1Q9NZV6 116 aa13.77□□□□□ -0.21
SDR39U1-220ENST00000556548 LINC01619G3V211 115 aa13.76□□□□□ -0.21
SDR39U1-220ENST00000556548 IGLC6P0CF74 106 aa13.76□□□□□ -0.21
SDR39U1-220ENST00000556548 NTF3P20783 257 aa13.76□□□□□ -0.21
SDR39U1-220ENST00000556548 VAMP3Q15836 100 aa13.76□□□□□ -0.21
SDR39U1-220ENST00000556548 PSMG4Q5JS54 123 aa13.76□□□□□ -0.21
SDR39U1-220ENST00000556548 ADAMTSL5Q6ZMM2 481 aa13.76□□□□□ -0.21
SDR39U1-220ENST00000556548 KCNS1Q96KK3 526 aa13.76□□□□□ -0.21
SDR39U1-220ENST00000556548 GPX1P07203 203 aa13.76□□□□□ -0.21
SDR39U1-220ENST00000556548 ZFAND2AQ8N6M9 145 aa13.76□□□□□ -0.21
SDR39U1-220ENST00000556548 OR1N2Q8NGR9 330 aa13.76□□□□□ -0.21
SDR39U1-220ENST00000556548 C4orf3Q8WVX3 66 aa13.76□□□□□ -0.21
SDR39U1-220ENST00000556548 RNASE4P34096 147 aaKnown RBP13.75□□□□□ -0.21
SDR39U1-220ENST00000556548 AMTP48728 403 aa13.75□□□□□ -0.21
SDR39U1-220ENST00000556548 RNASEKQ6P5S7 137 aaKnown RBP13.75□□□□□ -0.21
SDR39U1-220ENST00000556548 SRSF2Q01130 221 aaKnown RBP13.75□□□□□ -0.21
SDR39U1-220ENST00000556548 RNF114Q9Y508 228 aa13.75□□□□□ -0.21
SDR39U1-220ENST00000556548 IGKV3-20P01619 116 aa13.74□□□□□ -0.21
SDR39U1-220ENST00000556548 AMN1Q8IY45 258 aa13.74□□□□□ -0.21
SDR39U1-220ENST00000556548 TIMM8BQ9Y5J9 83 aaPredicted RBP13.74□□□□□ -0.21
SDR39U1-220ENST00000556548 CD28P10747 220 aa13.74□□□□□ -0.21
SDR39U1-220ENST00000556548 DLX4Q92988 240 aaPredicted RBP13.74□□□□□ -0.21
SDR39U1-220ENST00000556548 A0A1B0GW15 77 aa13.73□□□□□ -0.21
SDR39U1-220ENST00000556548 NIT1Q86X76 327 aa13.73□□□□□ -0.21
SDR39U1-220ENST00000556548 LENEPQ9Y5L5 61 aa13.73□□□□□ -0.21
SDR39U1-220ENST00000556548 HIVEP2P31629 2446 aa13.73□□□□□ -0.21
SDR39U1-220ENST00000556548 K7ERU9 68 aa13.73□□□□□ -0.21
SDR39U1-220ENST00000556548 LY6G6DO95868 133 aa13.73□□□□□ -0.21
SDR39U1-220ENST00000556548 CSN3P07498 182 aa13.73□□□□□ -0.21
SDR39U1-220ENST00000556548 K7EQG2 157 aa13.72□□□□□ -0.21
SDR39U1-220ENST00000556548 SPRY2O43597 315 aa13.72□□□□□ -0.21
SDR39U1-220ENST00000556548 ZNF324O75467 553 aaPredicted RBP13.72□□□□□ -0.21
SDR39U1-220ENST00000556548 URB1-AS1Q96HZ7 61 aa13.72□□□□□ -0.21
SDR39U1-220ENST00000556548 SNRPD3P62318 126 aaKnown RBP13.72□□□□□ -0.21
SDR39U1-220ENST00000556548 PMCHL1Q16048 86 aa13.72□□□□□ -0.21
SDR39U1-220ENST00000556548 ZNF493Q6ZR52 646 aa13.72□□□□□ -0.21
SDR39U1-220ENST00000556548 HSBP1O75506 76 aa13.71□□□□□ -0.21
SDR39U1-220ENST00000556548 RNASE1P07998 156 aaKnown RBP13.71□□□□□ -0.21
SDR39U1-220ENST00000556548 GATD1Q8NB37 220 aa13.71□□□□□ -0.21
SDR39U1-220ENST00000556548 OR9G4Q8NGQ1 327 aa13.71□□□□□ -0.21
SDR39U1-220ENST00000556548 OR10AG1Q8NH19 301 aa13.71□□□□□ -0.21
SDR39U1-220ENST00000556548 LINC01006Q8NI28 216 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms