RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 SCRT2Q9NQ03 307 aa15.38■□□□□ 0.05
ACTN1-220ENST00000556433 PGPEP1Q9NXJ5 209 aa15.38■□□□□ 0.05
ACTN1-220ENST00000556433 LY96Q9Y6Y9 160 aa15.38■□□□□ 0.05
ACTN1-220ENST00000556433 F6UZH7 168 aa15.37■□□□□ 0.05
ACTN1-220ENST00000556433 GNG5P63218 68 aa15.37■□□□□ 0.05
ACTN1-220ENST00000556433 ERVFC1-1P60608 527 aa15.36■□□□□ 0.05
ACTN1-220ENST00000556433 WFDC10BQ8IUB3 73 aa15.36■□□□□ 0.05
ACTN1-220ENST00000556433 TXNDC17Q9BRA2 123 aa15.36■□□□□ 0.05
ACTN1-220ENST00000556433 SDF2L1Q9HCN8 221 aa15.36■□□□□ 0.05
ACTN1-220ENST00000556433 C9JCJ5 164 aa15.35■□□□□ 0.05
ACTN1-220ENST00000556433 TYMSP04818 313 aa15.35■□□□□ 0.05
ACTN1-220ENST00000556433 SGK494Q96LW2 274 aa15.35■□□□□ 0.05
ACTN1-220ENST00000556433 ARL14EPLP0DKL9 152 aa15.34■□□□□ 0.05
ACTN1-220ENST00000556433 EVI2AP22794 236 aa15.34■□□□□ 0.05
ACTN1-220ENST00000556433 FUSP35637 526 aaKnown RBP eCLIP15.34■□□□□ 0.05
ACTN1-220ENST00000556433 CDC34P49427 236 aaPredicted RBP15.34■□□□□ 0.05
ACTN1-220ENST00000556433 KCNS1Q96KK3 526 aa15.34■□□□□ 0.05
ACTN1-220ENST00000556433 ALG5Q9Y673 324 aa15.34■□□□□ 0.05
ACTN1-220ENST00000556433 HSD17B11Q8NBQ5 300 aa15.33■□□□□ 0.04
ACTN1-220ENST00000556433 ASB13Q8WXK3 278 aa15.33■□□□□ 0.04
ACTN1-220ENST00000556433 NDFIP1Q9BT67 221 aa15.33■□□□□ 0.04
ACTN1-220ENST00000556433 MSRB1Q9NZV6 116 aa15.33■□□□□ 0.04
ACTN1-220ENST00000556433 LOC100131303A0A0U1RQF7 123 aa15.32■□□□□ 0.04
ACTN1-220ENST00000556433 K7EP13 123 aa15.32■□□□□ 0.04
ACTN1-220ENST00000556433 STAG3L2P0CL84 134 aa15.32■□□□□ 0.04
ACTN1-220ENST00000556433 STAG3L3P0CL85 134 aa15.32■□□□□ 0.04
ACTN1-220ENST00000556433 OR2G3Q8NGZ4 309 aa15.32■□□□□ 0.04
ACTN1-220ENST00000556433 SERTM2A0A1B0GWG4 89 aa15.31■□□□□ 0.04
ACTN1-220ENST00000556433 DNAH10OSP0CZ25 163 aa15.31■□□□□ 0.04
ACTN1-220ENST00000556433 RAB24Q969Q5 203 aa15.31■□□□□ 0.04
ACTN1-220ENST00000556433 A0A087WTM6 91 aa15.3■□□□□ 0.04
ACTN1-220ENST00000556433 TCRAP04437 139 aa15.3■□□□□ 0.04
ACTN1-220ENST00000556433 GCHFRP30047 84 aa15.3■□□□□ 0.04
ACTN1-220ENST00000556433 SH2D6Q7Z4S9 175 aa15.3■□□□□ 0.04
ACTN1-220ENST00000556433 C5orf17Q8NAS9 161 aa15.3■□□□□ 0.04
ACTN1-220ENST00000556433 NHLRC2Q8NBF2 726 aa15.3■□□□□ 0.04
ACTN1-220ENST00000556433 GATA1P15976 413 aaPredicted RBP15.29■□□□□ 0.04
ACTN1-220ENST00000556433 ATP6V0CP27449 155 aa15.29■□□□□ 0.04
ACTN1-220ENST00000556433 ZNF80P51504 273 aaPredicted RBP15.29■□□□□ 0.04
ACTN1-220ENST00000556433 CDPF1Q6NVV7 123 aa15.29■□□□□ 0.04
ACTN1-220ENST00000556433 SUN5Q8TC36 379 aa15.29■□□□□ 0.04
ACTN1-220ENST00000556433 PSMG3Q9BT73 122 aaPredicted RBP15.29■□□□□ 0.04
ACTN1-220ENST00000556433 PSG8Q9UQ74 426 aa15.29■□□□□ 0.04
ACTN1-220ENST00000556433 K7EQM0 130 aa15.28■□□□□ 0.04
ACTN1-220ENST00000556433 TAAR5O14804 337 aa15.28■□□□□ 0.04
ACTN1-220ENST00000556433 MBP02144 154 aa15.28■□□□□ 0.04
ACTN1-220ENST00000556433 CRYGDP07320 174 aa15.28■□□□□ 0.04
ACTN1-220ENST00000556433 SUMO1P63165 101 aaKnown RBP15.28■□□□□ 0.04
ACTN1-220ENST00000556433 ZNF876PQ49A33 203 aa15.28■□□□□ 0.04
ACTN1-220ENST00000556433 AQP10Q96PS8 301 aa15.28■□□□□ 0.04
ACTN1-220ENST00000556433 C11orf21Q9P2W6 132 aa15.28■□□□□ 0.04
ACTN1-220ENST00000556433 FBLL1A6NHQ2 334 aaKnown RBP15.27■□□□□ 0.04
ACTN1-220ENST00000556433 GCGP01275 180 aa15.27■□□□□ 0.04
ACTN1-220ENST00000556433 PPT1P50897 306 aa15.27■□□□□ 0.04
ACTN1-220ENST00000556433 MED28Q9H204 178 aa15.27■□□□□ 0.04
ACTN1-220ENST00000556433 TIRAPP58753 221 aa15.26■□□□□ 0.03
ACTN1-220ENST00000556433 SERF2P84101 59 aa15.26■□□□□ 0.03
ACTN1-220ENST00000556433 C10orf126Q8N4M7 172 aa15.26■□□□□ 0.03
ACTN1-220ENST00000556433 ACTR3CQ9C0K3 210 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-220ENST00000556433 TMEM167BQ9NRX6 74 aa15.26■□□□□ 0.03
ACTN1-220ENST00000556433 EPDR1Q9UM22 224 aa15.26■□□□□ 0.03
ACTN1-220ENST00000556433 RS1O15537 224 aa15.25■□□□□ 0.03
ACTN1-220ENST00000556433 CXorf1O96002 111 aa15.25■□□□□ 0.03
ACTN1-220ENST00000556433 PFN1P07737 140 aaKnown RBP15.25■□□□□ 0.03
ACTN1-220ENST00000556433 CFAP126Q5VTH2 177 aa15.25■□□□□ 0.03
ACTN1-220ENST00000556433 PRNTQ86SH4 94 aa15.25■□□□□ 0.03
ACTN1-220ENST00000556433 SLC25A29Q8N8R3 303 aa15.25■□□□□ 0.03
ACTN1-220ENST00000556433 IGHV3-73A0A0B4J1V6 119 aa15.24■□□□□ 0.03
ACTN1-220ENST00000556433 IGHV3-38A0A0C4DH36 116 aa15.24■□□□□ 0.03
ACTN1-220ENST00000556433 CIDEAO60543 219 aa15.24■□□□□ 0.03
ACTN1-220ENST00000556433 IGLV2-11P01706 119 aa15.24■□□□□ 0.03
ACTN1-220ENST00000556433 FLI1Q01543 452 aaPredicted RBP15.24■□□□□ 0.03
ACTN1-220ENST00000556433 ZFP69Q49AA0 526 aa15.24■□□□□ 0.03
ACTN1-220ENST00000556433 SMUG1Q53HV7 270 aa15.24■□□□□ 0.03
ACTN1-220ENST00000556433 Q5BKY6 102 aa15.24■□□□□ 0.03
ACTN1-220ENST00000556433 DPPA3Q6W0C5 159 aa15.24■□□□□ 0.03
ACTN1-220ENST00000556433 TMEM75Q8N9X5 138 aa15.24■□□□□ 0.03
ACTN1-220ENST00000556433 PRADC1Q9BSG0 188 aa15.24■□□□□ 0.03
ACTN1-220ENST00000556433 SH3BGRL3Q9H299 93 aa15.24■□□□□ 0.03
ACTN1-220ENST00000556433 TNFSF18Q9UNG2 199 aa15.24■□□□□ 0.03
ACTN1-220ENST00000556433 GGTLC3B5MD39 225 aa15.23■□□□□ 0.03
ACTN1-220ENST00000556433 CYB561D1Q8N8Q1 229 aa15.23■□□□□ 0.03
ACTN1-220ENST00000556433 C9orf85Q96MD7 179 aa15.23■□□□□ 0.03
ACTN1-220ENST00000556433 BATF3Q9NR55 127 aa15.23■□□□□ 0.03
ACTN1-220ENST00000556433 TRAV8-6A0A0B4J262 113 aa15.22■□□□□ 0.03
ACTN1-220ENST00000556433 TRBV6-4A0A1B0GX49 114 aa15.22■□□□□ 0.03
ACTN1-220ENST00000556433 PGPEP1LA6NFU8 196 aa15.22■□□□□ 0.03
ACTN1-220ENST00000556433 EPM2AB3EWF7 344 aa15.22■□□□□ 0.03
ACTN1-220ENST00000556433 PTTG1O95997 202 aa15.22■□□□□ 0.03
ACTN1-220ENST00000556433 XGP55808 180 aa15.22■□□□□ 0.03
ACTN1-220ENST00000556433 KRTAP10-1P60331 282 aa15.22■□□□□ 0.03
ACTN1-220ENST00000556433 RHOHQ15669 191 aa15.22■□□□□ 0.03
ACTN1-220ENST00000556433 LINC01556Q5JQF7 62 aa15.21■□□□□ 0.03
ACTN1-220ENST00000556433 SAPCD1Q5SSQ6 148 aa15.21■□□□□ 0.03
ACTN1-220ENST00000556433 INO80EQ8NBZ0 244 aaPredicted RBP15.21■□□□□ 0.03
ACTN1-220ENST00000556433 PTH2Q96A98 100 aa15.21■□□□□ 0.03
ACTN1-220ENST00000556433 OR10J3Q5JRS4 329 aa15.2■□□□□ 0.02
ACTN1-220ENST00000556433 ZNF506Q5JVG8 444 aa15.2■□□□□ 0.02
ACTN1-220ENST00000556433 A0A1W2PRE2 83 aa15.19■□□□□ 0.02
ACTN1-220ENST00000556433 PSCAO43653 123 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms