RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 OR4C12Q96R67 309 aa-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 LPAR5Q9H1C0 372 aa-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 NAT8BQ9UHF3 227 aa-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 TPRKBQ9Y3C4 175 aa-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 PRUNE2Q8WUY3 3088 aa-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 TNXBP22105 4242 aa-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 UBR2Q8IWV8 1755 aa-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.02□□□□□ -2.412e-6■■■■■ 26.9
SCFD1-214ENST00000554819 MYO7AQ13402 2215 aa-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 KDM6BO15054 1643 aa-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 KDM5CP41229 1560 aa-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 HMGXB3Q12766 1538 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 WDFY3Q8IZQ1 3526 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 TRAPPC8Q9Y2L5 1435 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 APC2O95996 2303 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 FRYQ5TBA9 3013 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 H3BQV1 296 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 KPNA4O00629 521 aaPredicted RBP-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 SULT1C4O75897 302 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 LY6G6CO95867 125 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 FABP4P15090 132 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 CAV3P56539 151 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 RPL37P61927 97 aaKnown RBP-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 ASB16-AS1Q495Z4 193 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 GLYATL3Q5SZD4 288 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 IZUMO2Q6UXV1 221 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 CASC2Q6XLA1 102 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 DEFB132Q7Z7B7 95 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 TMED4Q7Z7H5 227 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 LYG2Q86SG7 212 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 NEK7Q8TDX7 302 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 CARD19Q96LW7 228 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 LRTM1Q9HBL6 345 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 TAF9BQ9HBM6 251 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 OTORQ9NRC9 128 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 IL20Q9NYY1 176 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 LAMTOR3Q9UHA4 124 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 ADGBQ8N7X0 1667 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 CSMD2Q7Z408 3487 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 ATMQ13315 3056 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 CADP27708 2225 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 MED14O60244 1454 aa-0.03□□□□□ -2.41
SCFD1-214ENST00000554819 TRIOO75962 3097 aa-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 CTTNBP2Q8WZ74 1663 aa-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 TRDV1A0A1B0GX56 115 aa-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 TRACP01848 142 aa-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 MT-ND6P03923 174 aa-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 EVI2AP22794 236 aa-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 ASIPP42127 132 aa-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 NEDD8Q15843 81 aa-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 SPINK13Q1W4C9 94 aa-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 SMIM20Q8N5G0 67 aa-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 C5orf17Q8NAS9 161 aa-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 OR4B1Q8NGF8 309 aa-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 AP3S1Q92572 193 aa-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 BORCS8Q96FH0 119 aa-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 STOML2Q9UJZ1 356 aa-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 NUBP2Q9Y5Y2 271 aa-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 VPS13CQ709C8 3753 aa-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 SPTBN5Q9NRC6 3674 aaKnown RBP-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 ANK2Q01484 3957 aa-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 SPTBN2O15020 2390 aa-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 COL14A1Q05707 1796 aaKnown RBP-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 RBBP6Q7Z6E9 1792 aaKnown RBP-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 TECPR2O15040 1411 aa-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 YTHDC2Q9H6S0 1430 aaKnown RBP-0.04□□□□□ -2.42
SCFD1-214ENST00000554819 CDH23Q9H251 3354 aa-0.05□□□□□ -2.42
SCFD1-214ENST00000554819 PKHD1P08F94 4074 aa-0.05□□□□□ -2.42
SCFD1-214ENST00000554819 DNAH1Q9P2D7 4330 aa-0.05□□□□□ -2.42
SCFD1-214ENST00000554819 DSPPQ9NZW4 1301 aa-0.05□□□□□ -2.42
SCFD1-214ENST00000554819 SPTBN1Q01082 2364 aaKnown RBP-0.05□□□□□ -2.42
SCFD1-214ENST00000554819 SETBP1Q9Y6X0 1596 aa-0.05□□□□□ -2.42
SCFD1-214ENST00000554819 GYPBP06028 91 aa-0.05□□□□□ -2.42
SCFD1-214ENST00000554819 RPS3P23396 243 aaKnown RBP eCLIP-0.05□□□□□ -2.42
SCFD1-214ENST00000554819 GLRXP35754 106 aa-0.05□□□□□ -2.42
SCFD1-214ENST00000554819 TCTAP57738 103 aa-0.05□□□□□ -2.42
SCFD1-214ENST00000554819 TAS2R41P59536 307 aa-0.05□□□□□ -2.42
SCFD1-214ENST00000554819 KRTAP6-1Q3LI64 71 aa-0.05□□□□□ -2.42
SCFD1-214ENST00000554819 OR5AK2Q8NH90 309 aa-0.05□□□□□ -2.42
SCFD1-214ENST00000554819 ISOC1Q96CN7 298 aa-0.05□□□□□ -2.42
SCFD1-214ENST00000554819 AP1S3Q96PC3 154 aa-0.05□□□□□ -2.42
SCFD1-214ENST00000554819 CIB3Q96Q77 187 aaPredicted RBP-0.05□□□□□ -2.42
SCFD1-214ENST00000554819 BOLA2Q9H3K6 86 aa-0.05□□□□□ -2.42
SCFD1-214ENST00000554819 MRPL35Q9NZE8 188 aaKnown RBP-0.05□□□□□ -2.42
SCFD1-214ENST00000554819 UFC1Q9Y3C8 167 aa-0.05□□□□□ -2.42
SCFD1-214ENST00000554819 MYO5AQ9Y4I1 1855 aaKnown RBP-0.05□□□□□ -2.42
SCFD1-214ENST00000554819 PLECQ15149 4684 aaKnown RBP-0.05□□□□□ -2.42
SCFD1-214ENST00000554819 ACACAQ13085 2346 aa-0.05□□□□□ -2.42
SCFD1-214ENST00000554819 PKD1P98161 4303 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 NBDYA0A0U1RRE5 68 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 C3orf85A0A1B0GTC6 90 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 PRORSD1PA6NEY8 169 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 H7BYZ3 331 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 IGF2P01344 180 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 SAA1P0DJI8 122 aaPredicted RBP-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 NDUFA6P56556 154 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 FXYD3Q14802 87 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 KRTAP20-2Q3LI61 65 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 CCSMST1Q4G0I0 132 aa-0.06□□□□□ -2.42
SCFD1-214ENST00000554819 Q5VSD8 79 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms