RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 SEC11BP0C7V7 166 aa7.44□□□□□ -1.22
SHMT2-213ENST00000554600 PPT1P50897 306 aa7.44□□□□□ -1.22
SHMT2-213ENST00000554600 FAM3BP58499 235 aaPredicted RBP7.44□□□□□ -1.22
SHMT2-213ENST00000554600 LGALS9BQ3B8N2 356 aa7.44□□□□□ -1.22
SHMT2-213ENST00000554600 AKAP14Q86UN6 197 aa7.44□□□□□ -1.22
SHMT2-213ENST00000554600 FAM213BQ8TBF2 198 aa7.44□□□□□ -1.22
SHMT2-213ENST00000554600 KCNS1Q96KK3 526 aa7.44□□□□□ -1.22
SHMT2-213ENST00000554600 SPXQ9BT56 116 aa7.44□□□□□ -1.22
SHMT2-213ENST00000554600 TRGV4A0A0C4DH28 118 aa7.43□□□□□ -1.22
SHMT2-213ENST00000554600 A0A1B0GV50 99 aa7.43□□□□□ -1.22
SHMT2-213ENST00000554600 FBLL1A6NHQ2 334 aaKnown RBP7.43□□□□□ -1.22
SHMT2-213ENST00000554600 FAM74A7A6NL05 159 aa7.43□□□□□ -1.22
SHMT2-213ENST00000554600 UMAD1C9J7I0 102 aa7.43□□□□□ -1.22
SHMT2-213ENST00000554600 PAX4O43316 350 aa7.43□□□□□ -1.22
SHMT2-213ENST00000554600 C1QBP02746 253 aa7.43□□□□□ -1.22
SHMT2-213ENST00000554600 TYMSP04818 313 aa7.43□□□□□ -1.22
SHMT2-213ENST00000554600 FHITP49789 147 aa7.43□□□□□ -1.22
SHMT2-213ENST00000554600 SMUG1Q53HV7 270 aa7.43□□□□□ -1.22
SHMT2-213ENST00000554600 CST9LP1Q5W188 147 aa7.43□□□□□ -1.22
SHMT2-213ENST00000554600 TMEM75Q8N9X5 138 aa7.43□□□□□ -1.22
SHMT2-213ENST00000554600 C18orf15Q96N68 181 aa7.43□□□□□ -1.22
SHMT2-213ENST00000554600 NKX6-2Q9C056 277 aaPredicted RBP7.43□□□□□ -1.22
SHMT2-213ENST00000554600 LINC00588Q9Y4M8 146 aa7.43□□□□□ -1.22
SHMT2-213ENST00000554600 IGHV3-16A0A0C4DH30 117 aa7.42□□□□□ -1.22
SHMT2-213ENST00000554600 H3BNG1 76 aa7.42□□□□□ -1.22
SHMT2-213ENST00000554600 PEX7O00628 323 aa7.42□□□□□ -1.22
SHMT2-213ENST00000554600 IGLV2-11P01706 119 aa7.42□□□□□ -1.22
SHMT2-213ENST00000554600 SFTA3P0C7M3 94 aa7.42□□□□□ -1.22
SHMT2-213ENST00000554600 TPT1P13693 172 aaKnown RBP7.42□□□□□ -1.22
SHMT2-213ENST00000554600 ZNF80P51504 273 aaPredicted RBP7.42□□□□□ -1.22
SHMT2-213ENST00000554600 TDRG1Q3Y452 100 aa7.42□□□□□ -1.22
SHMT2-213ENST00000554600 SOHLH1Q5JUK2 328 aa7.42□□□□□ -1.22
SHMT2-213ENST00000554600 SAPCD1Q5SSQ6 148 aa7.42□□□□□ -1.22
SHMT2-213ENST00000554600 SFT2D1Q8WV19 159 aa7.42□□□□□ -1.22
SHMT2-213ENST00000554600 VSIG2Q96IQ7 327 aa7.42□□□□□ -1.22
SHMT2-213ENST00000554600 LINC00479Q96M42 142 aa7.42□□□□□ -1.22
SHMT2-213ENST00000554600 DNAH10Q8IVF4 4471 aa7.41□□□□□ -1.22
SHMT2-213ENST00000554600 C9JCJ5 164 aa7.41□□□□□ -1.22
SHMT2-213ENST00000554600 M0R2P5 195 aa7.41□□□□□ -1.22
SHMT2-213ENST00000554600 PFN1P07737 140 aaKnown RBP7.41□□□□□ -1.22
SHMT2-213ENST00000554600 UBE2G1P62253 170 aa7.41□□□□□ -1.22
SHMT2-213ENST00000554600 SLAQ13239 276 aa7.41□□□□□ -1.22
SHMT2-213ENST00000554600 LGALSLQ3ZCW2 172 aaPredicted RBP7.41□□□□□ -1.22
SHMT2-213ENST00000554600 Q6ZR54 194 aa7.41□□□□□ -1.22
SHMT2-213ENST00000554600 LINC00336Q6ZUF6 198 aa7.41□□□□□ -1.22
SHMT2-213ENST00000554600 OR4C5Q8NGB2 326 aa7.41□□□□□ -1.22
SHMT2-213ENST00000554600 ZNRF2Q8NHG8 242 aa7.41□□□□□ -1.22
SHMT2-213ENST00000554600 HIST1H2BAQ96A08 127 aa7.41□□□□□ -1.22
SHMT2-213ENST00000554600 ZNF479Q96JC4 524 aa7.41□□□□□ -1.22
SHMT2-213ENST00000554600 PRO0255Q9UI72 69 aa7.41□□□□□ -1.22
SHMT2-213ENST00000554600 HHLA3Q9XRX5 114 aa7.41□□□□□ -1.22
SHMT2-213ENST00000554600 ICOSQ9Y6W8 199 aa7.41□□□□□ -1.22
SHMT2-213ENST00000554600 ARL2-SNX15V9GYD0 113 aa7.41□□□□□ -1.22
SHMT2-213ENST00000554600 A0A096LPF7 62 aa7.4□□□□□ -1.22
SHMT2-213ENST00000554600 NBDYA0A0U1RRE5 68 aa7.4□□□□□ -1.22
SHMT2-213ENST00000554600 PRSS29PA6NIE9 313 aa7.4□□□□□ -1.22
SHMT2-213ENST00000554600 PAGE4O60829 102 aa7.4□□□□□ -1.22
SHMT2-213ENST00000554600 FHL2Q14192 279 aa7.4□□□□□ -1.22
SHMT2-213ENST00000554600 ESRGQ1W209 222 aa7.4□□□□□ -1.22
SHMT2-213ENST00000554600 C1orf134Q5TEV5 83 aa7.4□□□□□ -1.22
SHMT2-213ENST00000554600 EIF5AL1Q6IS14 154 aaKnown RBP7.4□□□□□ -1.22
SHMT2-213ENST00000554600 DPPA3Q6W0C5 159 aa7.4□□□□□ -1.22
SHMT2-213ENST00000554600 Q86TA4 180 aa7.4□□□□□ -1.22
SHMT2-213ENST00000554600 C11orf21Q9P2W6 132 aa7.4□□□□□ -1.22
SHMT2-213ENST00000554600 TRAV4A0A0B4J268 109 aa7.39□□□□□ -1.23
SHMT2-213ENST00000554600 RTL8CO15255 209 aa7.39□□□□□ -1.23
SHMT2-213ENST00000554600 H2AFB1P0C5Y9 115 aa7.39□□□□□ -1.23
SHMT2-213ENST00000554600 S100A4P26447 101 aaKnown RBP7.39□□□□□ -1.23
SHMT2-213ENST00000554600 AKR1C3P42330 323 aa7.39□□□□□ -1.23
SHMT2-213ENST00000554600 CRYBA4P53673 196 aa7.39□□□□□ -1.23
SHMT2-213ENST00000554600 PCNPQ8WW12 178 aaKnown RBP7.39□□□□□ -1.23
SHMT2-213ENST00000554600 MBD3L1Q8WWY6 194 aa7.39□□□□□ -1.23
SHMT2-213ENST00000554600 RASL10AQ92737 203 aa7.39□□□□□ -1.23
SHMT2-213ENST00000554600 Q9H8V8 135 aa7.39□□□□□ -1.23
SHMT2-213ENST00000554600 FABP5P3A8MUU1 101 aa7.38□□□□□ -1.23
SHMT2-213ENST00000554600 ORM1P02763 201 aa7.38□□□□□ -1.23
SHMT2-213ENST00000554600 MRPL23Q16540 153 aaKnown RBP7.38□□□□□ -1.23
SHMT2-213ENST00000554600 ZNF876PQ49A33 203 aa7.38□□□□□ -1.23
SHMT2-213ENST00000554600 SLC51BQ86UW2 128 aa7.38□□□□□ -1.23
SHMT2-213ENST00000554600 FMC1Q96HJ9 113 aa7.38□□□□□ -1.23
SHMT2-213ENST00000554600 MRPS16Q9Y3D3 137 aaKnown RBP7.38□□□□□ -1.23
SHMT2-213ENST00000554600 M0R036 132 aa7.37□□□□□ -1.23
SHMT2-213ENST00000554600 GYPEP15421 78 aa7.37□□□□□ -1.23
SHMT2-213ENST00000554600 SRIP30626 198 aa7.37□□□□□ -1.23
SHMT2-213ENST00000554600 ASIPP42127 132 aa7.37□□□□□ -1.23
SHMT2-213ENST00000554600 RAB5CP51148 216 aa7.37□□□□□ -1.23
SHMT2-213ENST00000554600 TTC32Q5I0X7 151 aa7.37□□□□□ -1.23
SHMT2-213ENST00000554600 ZC2HC1AQ96GY0 325 aa7.37□□□□□ -1.23
SHMT2-213ENST00000554600 TCEAL7Q9BRU2 100 aa7.37□□□□□ -1.23
SHMT2-213ENST00000554600 ZFP30Q9Y2G7 519 aa7.37□□□□□ -1.23
SHMT2-213ENST00000554600 IGHV3-73A0A0B4J1V6 119 aa7.36□□□□□ -1.23
SHMT2-213ENST00000554600 B4DEV8 164 aa7.36□□□□□ -1.23
SHMT2-213ENST00000554600 SH2D1AO60880 128 aa7.36□□□□□ -1.23
SHMT2-213ENST00000554600 NEGR1Q7Z3B1 354 aa7.36□□□□□ -1.23
SHMT2-213ENST00000554600 C6orf223Q8N319 242 aa7.36□□□□□ -1.23
SHMT2-213ENST00000554600 C9orf62Q8N4C0 152 aa7.36□□□□□ -1.23
SHMT2-213ENST00000554600 NHLRC2Q8NBF2 726 aa7.36□□□□□ -1.23
SHMT2-213ENST00000554600 C9orf85Q96MD7 179 aa7.36□□□□□ -1.23
SHMT2-213ENST00000554600 TMSB15BA0A087X1C1 80 aa7.35□□□□□ -1.23
SHMT2-213ENST00000554600 IGKV3D-20A0A0C4DH25 116 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms