RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 GFRALQ6UXV0 394 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 ZCCHC24Q8N2G6 241 aaKnown RBP3.13□□□□□ -1.91
RDH11-204ENST00000553578 FAM19A4Q96LR4 140 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 RPUSD1Q9UJJ7 312 aaKnown RBP3.13□□□□□ -1.91
RDH11-204ENST00000553578 HHLA3Q9XRX5 114 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 TP53TG1Q9Y2A0 90 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 ZNF706Q9Y5V0 76 aaPredicted RBP3.13□□□□□ -1.91
RDH11-204ENST00000553578 NCOA6Q14686 2063 aaPredicted RBP3.13□□□□□ -1.91
RDH11-204ENST00000553578 NCOR1O75376 2440 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 IGHV4-4A0A075B6R2 117 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 IGHV3-15A0A0B4J1V0 119 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 IGHV4-28A0A0C4DH34 117 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 PATE4P0C8F1 98 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 IGHV4-30-4P0DP06 118 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 COX7CP15954 63 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 ZNF355PQ9NSJ1 428 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 CACNG5Q9UF02 275 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 C5orf63A6NC05 138 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 ZNF672Q499Z4 452 aaPredicted RBP3.12□□□□□ -1.91
RDH11-204ENST00000553578 LCE1DQ5T752 114 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 ZFP2Q6ZN57 461 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 Q6ZS92 163 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 SPTSSAQ969W0 71 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 CALYQ9NYX4 217 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 TRBV25-1A0A075B6N4 114 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 IGKV1D-8A0A087WSZ0 117 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 M0R2P5 195 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 SYNGR2O43760 224 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 NDUFS5O43920 106 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 IGHV3-9P01782 118 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 ARL14EPLP0DKL9 152 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 PYYP10082 97 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 HLA-DRB4P13762 266 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 NPC2P61916 151 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 SPRNQ5BIV9 151 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 FAM120AOSQ5T036 256 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 RTL8AQ9BWD3 113 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 HLA-DRB4X5D2U9 266 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 DOCK10Q96BY6 2186 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 IGKV1-27A0A075B6S5 117 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 IGHV1-69DA0A0B4J2H0 117 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 LOC389332A0A1B0GUA5 103 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 A6NED7 52 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 IQCF6A8MYZ5 107 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 H7C2G1 150 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 PPYP01298 95 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 GATA1P15976 413 aaPredicted RBP3.12□□□□□ -1.91
RDH11-204ENST00000553578 HOXD3P31249 432 aaPredicted RBP3.12□□□□□ -1.91
RDH11-204ENST00000553578 CIRBPQ14011 172 aaKnown RBP3.12□□□□□ -1.91
RDH11-204ENST00000553578 Q1RN00 199 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 S100A7L2Q5SY68 101 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 CEMP1Q6PRD7 247 aaPredicted RBP3.12□□□□□ -1.91
RDH11-204ENST00000553578 Q6ZPA2 131 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 FGF23Q9GZV9 251 aaPredicted RBP3.12□□□□□ -1.91
RDH11-204ENST00000553578 OSTCQ9NRP0 149 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 PLCE1Q9P212 2302 aa3.12□□□□□ -1.91
RDH11-204ENST00000553578 ABCA1O95477 2261 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 PIGBOS1A0A0B4J2F0 54 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 SHISA9B4DS77 424 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 J3QT63 122 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 TCL1BO95988 128 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 TCRAP04437 139 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 LGALS1P09382 135 aaKnown RBP3.11□□□□□ -1.91
RDH11-204ENST00000553578 MYCNOSP40205 109 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 PLGLB1Q02325 96 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 DRAM1Q8N682 238 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 OR11H6Q8NGC7 330 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 TXNDC17Q9BRA2 123 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 ZNF747Q9BV97 191 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 MED13Q9UHV7 2174 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 WDFY4Q6ZS81 3184 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 MYMXA0A1B0GTQ4 84 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 RPL37AP8A6NKH3 93 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 NCBP2LA6PVI3 153 aaKnown RBP3.11□□□□□ -1.91
RDH11-204ENST00000553578 EPM2AB3EWF7 344 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 CD28P10747 220 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 KISS1Q15726 138 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 FBXL19-AS1Q494R0 122 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 LINC00311Q8N616 119 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 TIMM17AQ99595 171 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 MGST2Q99735 147 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 OTORQ9NRC9 128 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 SPRR3Q9UBC9 169 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 PRR14LQ5THK1 2151 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 A6NDX4 124 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 HIGD1CA8MV81 97 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 H3BMM0 161 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 M0R135 149 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 DLX1P56177 255 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 FGF12P61328 243 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 HBBP68871 147 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 CD164Q04900 197 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 TFF3Q07654 80 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 Q8N9W7 124 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 UBE2WQ96B02 151 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 ZNF799Q96GE5 643 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 ODF3Q96PU9 254 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 AGPAT4-IT1Q9H0P7 198 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 TIMM9Q9Y5J7 89 aa3.11□□□□□ -1.91
RDH11-204ENST00000553578 APC2O95996 2303 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms