RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 H3BNG1 76 aa13.05□□□□□ -0.32
HDAC4-217ENST00000553145 PEX7O00628 323 aa13.05□□□□□ -0.32
HDAC4-217ENST00000553145 GCGP01275 180 aa13.05□□□□□ -0.32
HDAC4-217ENST00000553145 Q6ZR54 194 aa13.05□□□□□ -0.32
HDAC4-217ENST00000553145 DNAH2Q9P225 4427 aa13.04□□□□□ -0.32
HDAC4-217ENST00000553145 PFDN1O60925 122 aa13.04□□□□□ -0.32
HDAC4-217ENST00000553145 FAM3BP58499 235 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-217ENST00000553145 ZNRF2Q8NHG8 242 aa13.04□□□□□ -0.32
HDAC4-217ENST00000553145 FAM213BQ8TBF2 198 aa13.04□□□□□ -0.32
HDAC4-217ENST00000553145 SPXQ9BT56 116 aa13.04□□□□□ -0.32
HDAC4-217ENST00000553145 SDF2L1Q9HCN8 221 aa13.04□□□□□ -0.32
HDAC4-217ENST00000553145 MUC4Q99102 2169 aa13.04□□□□□ -0.32
HDAC4-217ENST00000553145 FBLL1A6NHQ2 334 aaKnown RBP13.03□□□□□ -0.32
HDAC4-217ENST00000553145 CCL18P55774 89 aa13.03□□□□□ -0.32
HDAC4-217ENST00000553145 SMUG1Q53HV7 270 aa13.03□□□□□ -0.32
HDAC4-217ENST00000553145 Q86TA4 180 aa13.03□□□□□ -0.32
HDAC4-217ENST00000553145 TCTE3Q8IZS6 198 aa13.03□□□□□ -0.32
HDAC4-217ENST00000553145 STOML3Q8TAV4 291 aa13.03□□□□□ -0.32
HDAC4-217ENST00000553145 MBD3L1Q8WWY6 194 aa13.03□□□□□ -0.32
HDAC4-217ENST00000553145 RASL10AQ92737 203 aa13.03□□□□□ -0.32
HDAC4-217ENST00000553145 ARL2-SNX15V9GYD0 113 aa13.03□□□□□ -0.32
HDAC4-217ENST00000553145 A0A1B0GV50 99 aa13.02□□□□□ -0.33
HDAC4-217ENST00000553145 UMAD1C9J7I0 102 aa13.02□□□□□ -0.33
HDAC4-217ENST00000553145 PFN1P07737 140 aaKnown RBP13.02□□□□□ -0.33
HDAC4-217ENST00000553145 SFTA3P0C7M3 94 aa13.02□□□□□ -0.33
HDAC4-217ENST00000553145 FHL2Q14192 279 aa13.02□□□□□ -0.33
HDAC4-217ENST00000553145 ZFP69Q49AA0 526 aa13.02□□□□□ -0.33
HDAC4-217ENST00000553145 SAPCD1Q5SSQ6 148 aa13.02□□□□□ -0.33
HDAC4-217ENST00000553145 HIST1H2BAQ96A08 127 aa13.02□□□□□ -0.33
HDAC4-217ENST00000553145 KCNS1Q96KK3 526 aa13.02□□□□□ -0.33
HDAC4-217ENST00000553145 NKX6-2Q9C056 277 aaPredicted RBP13.02□□□□□ -0.33
HDAC4-217ENST00000553145 A0A096LPF7 62 aa13.01□□□□□ -0.33
HDAC4-217ENST00000553145 RTL8CO15255 209 aa13.01□□□□□ -0.33
HDAC4-217ENST00000553145 TPT1P13693 172 aaKnown RBP13.01□□□□□ -0.33
HDAC4-217ENST00000553145 LGALSLQ3ZCW2 172 aaPredicted RBP13.01□□□□□ -0.33
HDAC4-217ENST00000553145 SFT2D1Q8WV19 159 aa13.01□□□□□ -0.33
HDAC4-217ENST00000553145 ZNF479Q96JC4 524 aa13.01□□□□□ -0.33
HDAC4-217ENST00000553145 M0R2P5 195 aa13□□□□□ -0.33
HDAC4-217ENST00000553145 PAGE4O60829 102 aa13□□□□□ -0.33
HDAC4-217ENST00000553145 PPT1P50897 306 aa13□□□□□ -0.33
HDAC4-217ENST00000553145 EIF5AP63241 154 aaKnown RBP13□□□□□ -0.33
HDAC4-217ENST00000553145 ESRGQ1W209 222 aa13□□□□□ -0.33
HDAC4-217ENST00000553145 CST9LP1Q5W188 147 aa13□□□□□ -0.33
HDAC4-217ENST00000553145 DNAH17Q9UFH2 4485 aa13□□□□□ -0.33
HDAC4-217ENST00000553145 FAT2Q9NYQ8 4349 aa12.99□□□□□ -0.33
HDAC4-217ENST00000553145 hCG_2014768A0A024R1R8 64 aa12.99□□□□□ -0.33
HDAC4-217ENST00000553145 PAX4O43316 350 aa12.99□□□□□ -0.33
HDAC4-217ENST00000553145 CRYBA4P53673 196 aa12.99□□□□□ -0.33
HDAC4-217ENST00000553145 DPPA3Q6W0C5 159 aa12.99□□□□□ -0.33
HDAC4-217ENST00000553145 PRO0255Q9UI72 69 aa12.99□□□□□ -0.33
HDAC4-217ENST00000553145 HHLA3Q9XRX5 114 aa12.98□□□□□ -0.33
HDAC4-217ENST00000553145 TRAV4A0A0B4J268 109 aa12.97□□□□□ -0.33
HDAC4-217ENST00000553145 IGKV3D-20A0A0C4DH25 116 aa12.97□□□□□ -0.33
HDAC4-217ENST00000553145 TRGV4A0A0C4DH28 118 aa12.97□□□□□ -0.33
HDAC4-217ENST00000553145 C1QBP02746 253 aa12.97□□□□□ -0.33
HDAC4-217ENST00000553145 H2AFB1P0C5Y9 115 aa12.97□□□□□ -0.33
HDAC4-217ENST00000553145 LINC00336Q6ZUF6 198 aa12.97□□□□□ -0.33
HDAC4-217ENST00000553145 ZC2HC1AQ96GY0 325 aa12.97□□□□□ -0.33
HDAC4-217ENST00000553145 C9orf85Q96MD7 179 aa12.97□□□□□ -0.33
HDAC4-217ENST00000553145 ICOSQ9Y6W8 199 aa12.97□□□□□ -0.33
HDAC4-217ENST00000553145 NBDYA0A0U1RRE5 68 aa12.96□□□□□ -0.33
HDAC4-217ENST00000553145 CRIP1P50238 77 aa12.96□□□□□ -0.33
HDAC4-217ENST00000553145 FMC1Q96HJ9 113 aa12.96□□□□□ -0.33
HDAC4-217ENST00000553145 TCEAL7Q9BRU2 100 aa12.96□□□□□ -0.33
HDAC4-217ENST00000553145 MRPS16Q9Y3D3 137 aaKnown RBP12.96□□□□□ -0.33
HDAC4-217ENST00000553145 TRBV6-1A0A0K0K1D8 114 aa12.95□□□□□ -0.34
HDAC4-217ENST00000553145 FABP5P3A8MUU1 101 aa12.95□□□□□ -0.34
HDAC4-217ENST00000553145 C9JCJ5 164 aa12.95□□□□□ -0.34
HDAC4-217ENST00000553145 RNASE3P12724 160 aaKnown RBP12.95□□□□□ -0.34
HDAC4-217ENST00000553145 AKR1C3P42330 323 aa12.95□□□□□ -0.34
HDAC4-217ENST00000553145 UBE2G1P62253 170 aa12.95□□□□□ -0.34
HDAC4-217ENST00000553145 SLAQ13239 276 aa12.95□□□□□ -0.34
HDAC4-217ENST00000553145 COX8CQ7Z4L0 72 aa12.95□□□□□ -0.34
HDAC4-217ENST00000553145 OR4C5Q8NGB2 326 aa12.95□□□□□ -0.34
HDAC4-217ENST00000553145 UPK3BQ9BT76 320 aa12.95□□□□□ -0.34
HDAC4-217ENST00000553145 ZFP30Q9Y2G7 519 aa12.95□□□□□ -0.34
HDAC4-217ENST00000553145 HECTD4Q9Y4D8 3996 aa12.95□□□□□ -0.34
HDAC4-217ENST00000553145 SCO2A0A1W2PP80 73 aa12.94□□□□□ -0.34
HDAC4-217ENST00000553145 CCL20P78556 96 aa12.94□□□□□ -0.34
HDAC4-217ENST00000553145 Q9H8V8 135 aa12.94□□□□□ -0.34
HDAC4-217ENST00000553145 A0A1B0GVY2 172 aa12.93□□□□□ -0.34
HDAC4-217ENST00000553145 PGPEP1LA6NFU8 196 aa12.93□□□□□ -0.34
HDAC4-217ENST00000553145 PRSS29PA6NIE9 313 aa12.93□□□□□ -0.34
HDAC4-217ENST00000553145 LTAP01374 205 aa12.93□□□□□ -0.34
HDAC4-217ENST00000553145 ZNF876PQ49A33 203 aa12.93□□□□□ -0.34
HDAC4-217ENST00000553145 C1orf134Q5TEV5 83 aa12.93□□□□□ -0.34
HDAC4-217ENST00000553145 AKAP14Q86UN6 197 aa12.93□□□□□ -0.34
HDAC4-217ENST00000553145 KRTAP1-5Q9BYS1 174 aa12.93□□□□□ -0.34
HDAC4-217ENST00000553145 SH2D1AO60880 128 aa12.92□□□□□ -0.34
HDAC4-217ENST00000553145 ZNF506Q5JVG8 444 aa12.92□□□□□ -0.34
HDAC4-217ENST00000553145 LOC100131303A0A0U1RQF7 123 aa12.91□□□□□ -0.34
HDAC4-217ENST00000553145 B4DEV8 164 aa12.91□□□□□ -0.34
HDAC4-217ENST00000553145 K7EQD1 137 aa12.91□□□□□ -0.34
HDAC4-217ENST00000553145 M0R036 132 aa12.91□□□□□ -0.34
HDAC4-217ENST00000553145 RS1O15537 224 aa12.91□□□□□ -0.34
HDAC4-217ENST00000553145 ORM1P02763 201 aa12.91□□□□□ -0.34
HDAC4-217ENST00000553145 SULT1A2P50226 295 aa12.91□□□□□ -0.34
HDAC4-217ENST00000553145 RAB5CP51148 216 aa12.91□□□□□ -0.34
HDAC4-217ENST00000553145 MRPL23Q16540 153 aaKnown RBP12.91□□□□□ -0.34
HDAC4-217ENST00000553145 CFAP126Q5VTH2 177 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms