RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 PXDC1Q5TGL8 231 aa4.57□□□□□ -1.68
PRPF40B-214ENST00000551320 C9orf47Q6ZRZ4 202 aa4.57□□□□□ -1.68
PRPF40B-214ENST00000551320 NEGR1Q7Z3B1 354 aa4.57□□□□□ -1.68
PRPF40B-214ENST00000551320 TMEM252Q8N6L7 170 aa4.57□□□□□ -1.68
PRPF40B-214ENST00000551320 ZNF680Q8NEM1 530 aa4.57□□□□□ -1.68
PRPF40B-214ENST00000551320 FXYD5Q96DB9 178 aa4.57□□□□□ -1.68
PRPF40B-214ENST00000551320 ODF3Q96PU9 254 aa4.57□□□□□ -1.68
PRPF40B-214ENST00000551320 BCL7BQ9BQE9 202 aa4.57□□□□□ -1.68
PRPF40B-214ENST00000551320 LINC00467Q9BRT7 94 aa4.57□□□□□ -1.68
PRPF40B-214ENST00000551320 MRPL32Q9BYC8 188 aaKnown RBP4.57□□□□□ -1.68
PRPF40B-214ENST00000551320 SLC25A31Q9H0C2 315 aa4.57□□□□□ -1.68
PRPF40B-214ENST00000551320 OR5AC2Q9NZP5 309 aa4.57□□□□□ -1.68
PRPF40B-214ENST00000551320 ZNF492Q9P255 531 aa4.57□□□□□ -1.68
PRPF40B-214ENST00000551320 Q9UF83 564 aa4.57□□□□□ -1.68
PRPF40B-214ENST00000551320 FAT3Q8TDW7 4589 aa4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 TRAV8-1A0A0A6YYK1 113 aa4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 HMGB3O15347 200 aaKnown RBP4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 TCRBP04435 133 aa4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 NBEAP1P0C6P0 100 aa4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 CRISP2P16562 243 aa4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 RPL29P47914 159 aaKnown RBP4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 SULT1A1P50225 295 aa4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 ZNF138P52744 262 aa4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 TIRAPP58753 221 aa4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 GNG5P63218 68 aa4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 VWC2Q2TAL6 325 aa4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 DPPA3Q6W0C5 159 aa4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 C12orf45Q8N5I9 185 aaPredicted RBP4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 NHLRC2Q8NBF2 726 aa4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 OR1L4Q8NGR5 311 aa4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 TVP23CQ96ET8 276 aa4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 GGACTQ9BVM4 153 aa4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 NPCDR1Q9BY65 106 aa4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 SMIM3Q9BZL3 60 aa4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 NUDT15Q9NV35 164 aa4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 PTTG2Q9NZH5 202 aa4.56□□□□□ -1.68
PRPF40B-214ENST00000551320 PIGBOS1A0A0B4J2F0 54 aa4.55□□□□□ -1.68
PRPF40B-214ENST00000551320 NAP1L6A6NFF2 107 aa4.55□□□□□ -1.68
PRPF40B-214ENST00000551320 C9JCJ5 164 aa4.55□□□□□ -1.68
PRPF40B-214ENST00000551320 H0YIZ8 118 aa4.55□□□□□ -1.68
PRPF40B-214ENST00000551320 LYRM1O43325 122 aa4.55□□□□□ -1.68
PRPF40B-214ENST00000551320 PSCAO43653 123 aa4.55□□□□□ -1.68
PRPF40B-214ENST00000551320 OR7C2O60412 319 aa4.55□□□□□ -1.68
PRPF40B-214ENST00000551320 EVI2AP22794 236 aa4.55□□□□□ -1.68
PRPF40B-214ENST00000551320 IL15RAQ13261 267 aa4.55□□□□□ -1.68
PRPF40B-214ENST00000551320 RAB31Q13636 194 aa4.55□□□□□ -1.68
PRPF40B-214ENST00000551320 GUK1Q16774 197 aa4.55□□□□□ -1.68
PRPF40B-214ENST00000551320 S100A7AQ86SG5 101 aa4.55□□□□□ -1.68
PRPF40B-214ENST00000551320 TMEM75Q8N9X5 138 aa4.55□□□□□ -1.68
PRPF40B-214ENST00000551320 OR5C1Q8NGR4 320 aa4.55□□□□□ -1.68
PRPF40B-214ENST00000551320 C2orf50Q96LR7 162 aa4.55□□□□□ -1.68
PRPF40B-214ENST00000551320 PFDN5Q99471 154 aa4.55□□□□□ -1.68
PRPF40B-214ENST00000551320 PAXXQ9BUH6 204 aa4.55□□□□□ -1.68
PRPF40B-214ENST00000551320 OR51M1Q9H341 326 aa4.55□□□□□ -1.68
PRPF40B-214ENST00000551320 AAMDCQ9H7C9 122 aa4.55□□□□□ -1.68
PRPF40B-214ENST00000551320 LYRM2Q9NU23 88 aaPredicted RBP4.55□□□□□ -1.68
PRPF40B-214ENST00000551320 TMEM14CQ9P0S9 112 aa4.55□□□□□ -1.68
PRPF40B-214ENST00000551320 C11orf21Q9P2W6 132 aa4.55□□□□□ -1.68
PRPF40B-214ENST00000551320 S100A11P31949 105 aa4.54□□□□□ -1.68
PRPF40B-214ENST00000551320 ZNF80P51504 273 aaPredicted RBP4.54□□□□□ -1.68
PRPF40B-214ENST00000551320 IBA57Q5T440 356 aaKnown RBP4.54□□□□□ -1.68
PRPF40B-214ENST00000551320 OR4C5Q8NGB2 326 aa4.54□□□□□ -1.68
PRPF40B-214ENST00000551320 PCNPQ8WW12 178 aaKnown RBP4.54□□□□□ -1.68
PRPF40B-214ENST00000551320 MRPL53Q96EL3 112 aaKnown RBP4.54□□□□□ -1.68
PRPF40B-214ENST00000551320 TRAV9-2A0A087WT02 112 aa4.53□□□□□ -1.68
PRPF40B-214ENST00000551320 CENPXA8MT69 81 aa4.53□□□□□ -1.68
PRPF40B-214ENST00000551320 ZNF253O75346 499 aa4.53□□□□□ -1.68
PRPF40B-214ENST00000551320 TYMSP04818 313 aa4.53□□□□□ -1.68
PRPF40B-214ENST00000551320 PPT1P50897 306 aa4.53□□□□□ -1.68
PRPF40B-214ENST00000551320 SUMO2P61956 95 aaKnown RBP4.53□□□□□ -1.68
PRPF40B-214ENST00000551320 UBE2L3P68036 154 aaKnown RBP4.53□□□□□ -1.68
PRPF40B-214ENST00000551320 ZNF266Q14584 549 aa4.53□□□□□ -1.68
PRPF40B-214ENST00000551320 OR10J3Q5JRS4 329 aa4.53□□□□□ -1.68
PRPF40B-214ENST00000551320 GOLT1AQ6ZVE7 132 aa4.53□□□□□ -1.68
PRPF40B-214ENST00000551320 DAZ4Q86SG3 579 aaKnown RBP4.53□□□□□ -1.68
PRPF40B-214ENST00000551320 NFE4Q86UQ8 179 aa4.53□□□□□ -1.68
PRPF40B-214ENST00000551320 STX12Q86Y82 276 aa4.53□□□□□ -1.68
PRPF40B-214ENST00000551320 Q8N814 137 aa4.53□□□□□ -1.68
PRPF40B-214ENST00000551320 SLC25A29Q8N8R3 303 aa4.53□□□□□ -1.68
PRPF40B-214ENST00000551320 OR10G4Q8NGN3 311 aa4.53□□□□□ -1.68
PRPF40B-214ENST00000551320 BAALCQ8WXS3 180 aa4.53□□□□□ -1.68
PRPF40B-214ENST00000551320 JPT2Q9H910 190 aa4.53□□□□□ -1.68
PRPF40B-214ENST00000551320 WFDC1Q9HC57 220 aa4.53□□□□□ -1.68
PRPF40B-214ENST00000551320 DAZ3Q9NR90 486 aaKnown RBP4.53□□□□□ -1.68
PRPF40B-214ENST00000551320 PRELID1Q9Y255 219 aa4.53□□□□□ -1.68
PRPF40B-214ENST00000551320 IGHV3-38A0A0C4DH36 116 aa4.52□□□□□ -1.69
PRPF40B-214ENST00000551320 PGPA6NDG6 321 aa4.52□□□□□ -1.69
PRPF40B-214ENST00000551320 PGPEP1LA6NFU8 196 aa4.52□□□□□ -1.69
PRPF40B-214ENST00000551320 TNFRSF6BO95407 300 aa4.52□□□□□ -1.69
PRPF40B-214ENST00000551320 SLPIP03973 132 aa4.52□□□□□ -1.69
PRPF40B-214ENST00000551320 GATA1P15976 413 aaPredicted RBP4.52□□□□□ -1.69
PRPF40B-214ENST00000551320 PVALBP20472 110 aaPredicted RBP4.52□□□□□ -1.69
PRPF40B-214ENST00000551320 PDE6HQ13956 83 aa4.52□□□□□ -1.69
PRPF40B-214ENST00000551320 FFAR4Q5NUL3 377 aa4.52□□□□□ -1.69
PRPF40B-214ENST00000551320 FAM159AQ6UWV7 190 aa4.52□□□□□ -1.69
PRPF40B-214ENST00000551320 RASL10AQ92737 203 aa4.52□□□□□ -1.69
PRPF40B-214ENST00000551320 WDR61Q9GZS3 305 aaKnown RBP4.52□□□□□ -1.69
PRPF40B-214ENST00000551320 RNF24Q9Y225 148 aa4.52□□□□□ -1.69
PRPF40B-214ENST00000551320 TRAV4A0A0B4J268 109 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms