RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 C17orf112F2Z3M2 114 aa10.29□□□□□ -0.76
RAB5C-205ENST00000550013 F6UZH7 168 aa10.29□□□□□ -0.76
RAB5C-205ENST00000550013 TYMSP04818 313 aa10.29□□□□□ -0.76
RAB5C-205ENST00000550013 FFAR4Q5NUL3 377 aa10.29□□□□□ -0.76
RAB5C-205ENST00000550013 SH2D6Q7Z4S9 175 aa10.29□□□□□ -0.76
RAB5C-205ENST00000550013 Q8N814 137 aa10.29□□□□□ -0.76
RAB5C-205ENST00000550013 TMED6Q8WW62 240 aa10.29□□□□□ -0.76
RAB5C-205ENST00000550013 KHDC3LQ587J8 217 aa10.28□□□□□ -0.76
RAB5C-205ENST00000550013 TVP23CQ96ET8 276 aa10.28□□□□□ -0.76
RAB5C-205ENST00000550013 TRAV21A0A0B4J279 112 aa10.27□□□□□ -0.77
RAB5C-205ENST00000550013 PGPA6NDG6 321 aa10.27□□□□□ -0.77
RAB5C-205ENST00000550013 J3QL48 77 aa10.27□□□□□ -0.77
RAB5C-205ENST00000550013 IGHV3-30P01768 117 aa10.27□□□□□ -0.77
RAB5C-205ENST00000550013 IGHV3-33P01772 117 aa10.27□□□□□ -0.77
RAB5C-205ENST00000550013 IGHV3-30-3P0DP02 117 aa10.27□□□□□ -0.77
RAB5C-205ENST00000550013 IGHV3-30-5P0DP03 117 aa10.27□□□□□ -0.77
RAB5C-205ENST00000550013 OR10J3Q5JRS4 329 aa10.27□□□□□ -0.77
RAB5C-205ENST00000550013 GOLT1AQ6ZVE7 132 aa10.27□□□□□ -0.77
RAB5C-205ENST00000550013 SLC25A29Q8N8R3 303 aa10.27□□□□□ -0.77
RAB5C-205ENST00000550013 ATP5SQ99766 215 aa10.27□□□□□ -0.77
RAB5C-205ENST00000550013 CCDC32Q9BV29 185 aa10.27□□□□□ -0.77
RAB5C-205ENST00000550013 NMES1Q9C002 83 aa10.27□□□□□ -0.77
RAB5C-205ENST00000550013 OTORQ9NRC9 128 aa10.27□□□□□ -0.77
RAB5C-205ENST00000550013 TRAV8-1A0A0A6YYK1 113 aa10.26□□□□□ -0.77
RAB5C-205ENST00000550013 TRAV8-6A0A0B4J262 113 aa10.26□□□□□ -0.77
RAB5C-205ENST00000550013 FBLL1A6NHQ2 334 aaKnown RBP10.26□□□□□ -0.77
RAB5C-205ENST00000550013 CMTM2Q8TAZ6 248 aa10.26□□□□□ -0.77
RAB5C-205ENST00000550013 SDF2L1Q9HCN8 221 aa10.26□□□□□ -0.77
RAB5C-205ENST00000550013 IGHV3-73A0A0B4J1V6 119 aa10.25□□□□□ -0.77
RAB5C-205ENST00000550013 PFN1P07737 140 aaKnown RBP10.25□□□□□ -0.77
RAB5C-205ENST00000550013 TAS2R45P59539 299 aa10.25□□□□□ -0.77
RAB5C-205ENST00000550013 GNG5P63218 68 aa10.25□□□□□ -0.77
RAB5C-205ENST00000550013 WFDC2Q14508 124 aa10.25□□□□□ -0.77
RAB5C-205ENST00000550013 MZT2BQ6NZ67 158 aa10.25□□□□□ -0.77
RAB5C-205ENST00000550013 DPPA3Q6W0C5 159 aa10.25□□□□□ -0.77
RAB5C-205ENST00000550013 SMIM3Q9BZL3 60 aa10.25□□□□□ -0.77
RAB5C-205ENST00000550013 TREM1Q9NP99 234 aa10.25□□□□□ -0.77
RAB5C-205ENST00000550013 MBD2Q9UBB5 411 aa10.25□□□□□ -0.77
RAB5C-205ENST00000550013 ASAH1Q13510 395 aa10.24□□□□□ -0.77
RAB5C-205ENST00000550013 ZNF876PQ49A33 203 aa10.24□□□□□ -0.77
RAB5C-205ENST00000550013 CFAP126Q5VTH2 177 aa10.24□□□□□ -0.77
RAB5C-205ENST00000550013 Q8N3U1 123 aa10.24□□□□□ -0.77
RAB5C-205ENST00000550013 ASB13Q8WXK3 278 aa10.24□□□□□ -0.77
RAB5C-205ENST00000550013 KCNS1Q96KK3 526 aa10.24□□□□□ -0.77
RAB5C-205ENST00000550013 C11orf21Q9P2W6 132 aa10.24□□□□□ -0.77
RAB5C-205ENST00000550013 HSPB11Q9Y547 144 aa10.24□□□□□ -0.77
RAB5C-205ENST00000550013 RS1O15537 224 aa10.23□□□□□ -0.77
RAB5C-205ENST00000550013 LELP1Q5T871 98 aa10.23□□□□□ -0.77
RAB5C-205ENST00000550013 SGK494Q96LW2 274 aa10.23□□□□□ -0.77
RAB5C-205ENST00000550013 PRADC1Q9BSG0 188 aa10.23□□□□□ -0.77
RAB5C-205ENST00000550013 C1QBP02746 253 aa10.22□□□□□ -0.77
RAB5C-205ENST00000550013 ZNF80P51504 273 aaPredicted RBP10.22□□□□□ -0.77
RAB5C-205ENST00000550013 H2BFSP57053 126 aa10.22□□□□□ -0.77
RAB5C-205ENST00000550013 RHOHQ15669 191 aa10.22□□□□□ -0.77
RAB5C-205ENST00000550013 FAM74A1Q5RGS3 127 aa10.22□□□□□ -0.77
RAB5C-205ENST00000550013 SCGB1C1Q8TD33 95 aa10.22□□□□□ -0.77
RAB5C-205ENST00000550013 PPP1R1CQ8WVI7 109 aa10.22□□□□□ -0.77
RAB5C-205ENST00000550013 TRBV6-4A0A1B0GX49 114 aa10.21□□□□□ -0.77
RAB5C-205ENST00000550013 LECT2O14960 151 aa10.21□□□□□ -0.77
RAB5C-205ENST00000550013 HMGB3O15347 200 aaKnown RBP10.21□□□□□ -0.77
RAB5C-205ENST00000550013 CYCSP99999 105 aaKnown RBP10.21□□□□□ -0.77
RAB5C-205ENST00000550013 Q6ZSA8 131 aa10.21□□□□□ -0.77
RAB5C-205ENST00000550013 LINC00528Q8N1L1 170 aa10.21□□□□□ -0.77
RAB5C-205ENST00000550013 ATP6V0E2Q8NHE4 81 aa10.21□□□□□ -0.77
RAB5C-205ENST00000550013 ENKURQ8TC29 256 aa10.21□□□□□ -0.77
RAB5C-205ENST00000550013 GTSF1LQ9H1H1 148 aa10.21□□□□□ -0.77
RAB5C-205ENST00000550013 WFDC1Q9HC57 220 aa10.21□□□□□ -0.77
RAB5C-205ENST00000550013 PGPEP1LA6NFU8 196 aa10.2□□□□□ -0.78
RAB5C-205ENST00000550013 RAB2AP61019 212 aa10.2□□□□□ -0.78
RAB5C-205ENST00000550013 LAGE3Q14657 143 aa10.2□□□□□ -0.78
RAB5C-205ENST00000550013 ZNF506Q5JVG8 444 aa10.2□□□□□ -0.78
RAB5C-205ENST00000550013 PQLC2Q6ZP29 291 aa10.2□□□□□ -0.78
RAB5C-205ENST00000550013 ARL6IP6Q8N6S5 226 aa10.2□□□□□ -0.78
RAB5C-205ENST00000550013 TMEM75Q8N9X5 138 aa10.2□□□□□ -0.78
RAB5C-205ENST00000550013 C9orf85Q96MD7 179 aa10.2□□□□□ -0.78
RAB5C-205ENST00000550013 TM2D2Q9BX73 214 aa10.2□□□□□ -0.78
RAB5C-205ENST00000550013 BOLA1Q9Y3E2 137 aa10.2□□□□□ -0.78
RAB5C-205ENST00000550013 LRP1Q07954 4544 aaKnown RBP10.19□□□□□ -0.78
RAB5C-205ENST00000550013 A0A1W2PPV4 95 aa10.19□□□□□ -0.78
RAB5C-205ENST00000550013 MPC2O95563 127 aa10.19□□□□□ -0.78
RAB5C-205ENST00000550013 PLA2G1BP04054 148 aaKnown RBP10.19□□□□□ -0.78
RAB5C-205ENST00000550013 RPL12P30050 165 aaKnown RBP10.19□□□□□ -0.78
RAB5C-205ENST00000550013 ACOT6Q3I5F7 207 aaPredicted RBP10.19□□□□□ -0.78
RAB5C-205ENST00000550013 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.18□□□□□ -0.78
RAB5C-205ENST00000550013 CIDEAO60543 219 aa10.18□□□□□ -0.78
RAB5C-205ENST00000550013 GCGP01275 180 aa10.18□□□□□ -0.78
RAB5C-205ENST00000550013 LINC01620Q4KN68 170 aa10.18□□□□□ -0.78
RAB5C-205ENST00000550013 NDFIP1Q9BT67 221 aa10.18□□□□□ -0.78
RAB5C-205ENST00000550013 KRTAP29-1A8MX34 341 aaPredicted RBP10.17□□□□□ -0.78
RAB5C-205ENST00000550013 INMT-MINDY4F8WBC2 141 aa10.17□□□□□ -0.78
RAB5C-205ENST00000550013 ARL14EPLP0DKL9 152 aa10.17□□□□□ -0.78
RAB5C-205ENST00000550013 MGST1P10620 155 aaKnown RBP10.17□□□□□ -0.78
RAB5C-205ENST00000550013 RNASE3P12724 160 aaKnown RBP10.17□□□□□ -0.78
RAB5C-205ENST00000550013 DAZ4Q86SG3 579 aaKnown RBP10.17□□□□□ -0.78
RAB5C-205ENST00000550013 DAZ3Q9NR90 486 aaKnown RBP10.17□□□□□ -0.78
RAB5C-205ENST00000550013 NDUFA13Q9P0J0 144 aa10.17□□□□□ -0.78
RAB5C-205ENST00000550013 HMCN2Q8NDA2 5059 aa10.16□□□□□ -0.78
RAB5C-205ENST00000550013 GAGE12JA6NER3 117 aa10.16□□□□□ -0.78
RAB5C-205ENST00000550013 TAAR5O14804 337 aa10.16□□□□□ -0.78
RAB5C-205ENST00000550013 TCRAP04437 139 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms