RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 SULT1A2P50226 295 aa5.85□□□□□ -1.47
USP28-215ENST00000545608 PKIAP61925 76 aa5.85□□□□□ -1.47
USP28-215ENST00000545608 ERCC8Q13216 396 aa5.85□□□□□ -1.47
USP28-215ENST00000545608 IL15RAQ13261 267 aa5.85□□□□□ -1.47
USP28-215ENST00000545608 RAB31Q13636 194 aa5.85□□□□□ -1.47
USP28-215ENST00000545608 GUK1Q16774 197 aa5.85□□□□□ -1.47
USP28-215ENST00000545608 VWC2Q2TAL6 325 aa5.85□□□□□ -1.47
USP28-215ENST00000545608 LRRC37A5PQ49AS3 106 aa5.85□□□□□ -1.47
USP28-215ENST00000545608 Q6ZTI0 123 aa5.85□□□□□ -1.47
USP28-215ENST00000545608 OR1L4Q8NGR5 311 aa5.85□□□□□ -1.47
USP28-215ENST00000545608 TMED6Q8WW62 240 aa5.85□□□□□ -1.47
USP28-215ENST00000545608 ZNF503Q96F45 646 aa5.85□□□□□ -1.47
USP28-215ENST00000545608 C2orf50Q96LR7 162 aa5.85□□□□□ -1.47
USP28-215ENST00000545608 AQP10Q96PS8 301 aa5.85□□□□□ -1.47
USP28-215ENST00000545608 ODF3Q96PU9 254 aa5.85□□□□□ -1.47
USP28-215ENST00000545608 PYGO2Q9BRQ0 406 aa5.85□□□□□ -1.47
USP28-215ENST00000545608 SLC39A9Q9NUM3 307 aa5.85□□□□□ -1.47
USP28-215ENST00000545608 CBY1Q9Y3M2 126 aa5.85□□□□□ -1.47
USP28-215ENST00000545608 TRBV19A0A075B6N1 114 aa5.84□□□□□ -1.47
USP28-215ENST00000545608 IGSF23A1L1A6 192 aa5.84□□□□□ -1.47
USP28-215ENST00000545608 ZNF253O75346 499 aa5.84□□□□□ -1.47
USP28-215ENST00000545608 NDUFB4O95168 129 aa5.84□□□□□ -1.47
USP28-215ENST00000545608 BAXQ07812 192 aa5.84□□□□□ -1.47
USP28-215ENST00000545608 DAZ2Q13117 558 aaKnown RBP5.84□□□□□ -1.47
USP28-215ENST00000545608 SPATA12Q7Z6I5 190 aa5.84□□□□□ -1.47
USP28-215ENST00000545608 TMEM252Q8N6L7 170 aa5.84□□□□□ -1.47
USP28-215ENST00000545608 VSIG2Q96IQ7 327 aa5.84□□□□□ -1.47
USP28-215ENST00000545608 UPK3BQ9BT76 320 aa5.84□□□□□ -1.47
USP28-215ENST00000545608 AGPAT4-IT1Q9H0P7 198 aa5.84□□□□□ -1.47
USP28-215ENST00000545608 RYR1P21817 5038 aa5.84□□□□□ -1.47
USP28-215ENST00000545608 A0A096LPF7 62 aa5.83□□□□□ -1.48
USP28-215ENST00000545608 UBE2L5PA0A1B0GUS4 154 aa5.83□□□□□ -1.48
USP28-215ENST00000545608 C7orf77A4D0Y5 90 aa5.83□□□□□ -1.48
USP28-215ENST00000545608 C7orf71A4D174 169 aa5.83□□□□□ -1.48
USP28-215ENST00000545608 H3BNG1 76 aa5.83□□□□□ -1.48
USP28-215ENST00000545608 PAX4O43316 350 aa5.83□□□□□ -1.48
USP28-215ENST00000545608 ZNF324O75467 553 aaPredicted RBP5.83□□□□□ -1.48
USP28-215ENST00000545608 SLC25A5P05141 298 aaKnown RBP5.83□□□□□ -1.48
USP28-215ENST00000545608 PYYP10082 97 aa5.83□□□□□ -1.48
USP28-215ENST00000545608 HIST1H1EP10412 219 aaKnown RBP5.83□□□□□ -1.48
USP28-215ENST00000545608 SULT1A1P50225 295 aa5.83□□□□□ -1.48
USP28-215ENST00000545608 KRTAP10-2P60368 255 aa5.83□□□□□ -1.48
USP28-215ENST00000545608 S100A10P60903 97 aa5.83□□□□□ -1.48
USP28-215ENST00000545608 TTC32Q5I0X7 151 aa5.83□□□□□ -1.48
USP28-215ENST00000545608 GCSAMLQ5JQS6 135 aa5.83□□□□□ -1.48
USP28-215ENST00000545608 MAPKAPK5-AS1Q8N8E1 139 aa5.83□□□□□ -1.48
USP28-215ENST00000545608 C11orf72Q8NBR9 251 aa5.83□□□□□ -1.48
USP28-215ENST00000545608 MRPL53Q96EL3 112 aaKnown RBP5.83□□□□□ -1.48
USP28-215ENST00000545608 FAM19A4Q96LR4 140 aa5.83□□□□□ -1.48
USP28-215ENST00000545608 Q9H3A6 140 aa5.83□□□□□ -1.48
USP28-215ENST00000545608 LYRM2Q9NU23 88 aaPredicted RBP5.83□□□□□ -1.48
USP28-215ENST00000545608 TMEM14CQ9P0S9 112 aa5.83□□□□□ -1.48
USP28-215ENST00000545608 MRPS16Q9Y3D3 137 aaKnown RBP5.83□□□□□ -1.48
USP28-215ENST00000545608 KLF12Q9Y4X4 402 aa5.83□□□□□ -1.48
USP28-215ENST00000545608 LRP1BQ9NZR2 4599 aa5.82□□□□□ -1.48
USP28-215ENST00000545608 TRGV2A0A075B6R0 118 aa5.82□□□□□ -1.48
USP28-215ENST00000545608 A0A1W2PPQ1 181 aa5.82□□□□□ -1.48
USP28-215ENST00000545608 KLLNB2CW77 178 aa5.82□□□□□ -1.48
USP28-215ENST00000545608 F5H697 171 aa5.82□□□□□ -1.48
USP28-215ENST00000545608 PPP1R2P9O14990 202 aa5.82□□□□□ -1.48
USP28-215ENST00000545608 TRIAP1O43715 76 aa5.82□□□□□ -1.48
USP28-215ENST00000545608 FGF7P21781 194 aa5.82□□□□□ -1.48
USP28-215ENST00000545608 RNASE4P34096 147 aaKnown RBP5.82□□□□□ -1.48
USP28-215ENST00000545608 ANXA2RQ3ZCQ2 193 aa5.82□□□□□ -1.48
USP28-215ENST00000545608 Q6ZQT7 251 aa5.82□□□□□ -1.48
USP28-215ENST00000545608 EXOC3-AS1Q8N2X6 119 aa5.82□□□□□ -1.48
USP28-215ENST00000545608 SYT8Q8NBV8 401 aa5.82□□□□□ -1.48
USP28-215ENST00000545608 BLNKQ8WV28 456 aa5.82□□□□□ -1.48
USP28-215ENST00000545608 LINC00477Q96M19 166 aa5.82□□□□□ -1.48
USP28-215ENST00000545608 C18orf15Q96N68 181 aa5.82□□□□□ -1.48
USP28-215ENST00000545608 LINC00467Q9BRT7 94 aa5.82□□□□□ -1.48
USP28-215ENST00000545608 EIF5A2Q9GZV4 153 aaKnown RBP5.82□□□□□ -1.48
USP28-215ENST00000545608 TIMM9Q9Y5J7 89 aa5.82□□□□□ -1.48
USP28-215ENST00000545608 HSPG2P98160 4391 aa5.82□□□□□ -1.48
USP28-215ENST00000545608 IGKV2-40A0A087WW87 121 aaPredicted RBP5.81□□□□□ -1.48
USP28-215ENST00000545608 A0A087WWC5 75 aa5.81□□□□□ -1.48
USP28-215ENST00000545608 TRGV1A0A0A0MS02 117 aa5.81□□□□□ -1.48
USP28-215ENST00000545608 B4DEV8 164 aa5.81□□□□□ -1.48
USP28-215ENST00000545608 SPINK4O60575 86 aa5.81□□□□□ -1.48
USP28-215ENST00000545608 IGKV2D-40P01614 121 aaPredicted RBP5.81□□□□□ -1.48
USP28-215ENST00000545608 SEC11BP0C7V7 166 aa5.81□□□□□ -1.48
USP28-215ENST00000545608 CRISP2P16562 243 aa5.81□□□□□ -1.48
USP28-215ENST00000545608 DDTP30046 118 aa5.81□□□□□ -1.48
USP28-215ENST00000545608 TCL1AP56279 114 aa5.81□□□□□ -1.48
USP28-215ENST00000545608 HBG1P69891 147 aa5.81□□□□□ -1.48
USP28-215ENST00000545608 HBG2P69892 147 aa5.81□□□□□ -1.48
USP28-215ENST00000545608 ICAM4Q14773 271 aa5.81□□□□□ -1.48
USP28-215ENST00000545608 ATP6V1FQ16864 119 aa5.81□□□□□ -1.48
USP28-215ENST00000545608 PRR9Q5T870 116 aa5.81□□□□□ -1.48
USP28-215ENST00000545608 C9orf47Q6ZRZ4 202 aa5.81□□□□□ -1.48
USP28-215ENST00000545608 ZFAND2AQ8N6M9 145 aa5.81□□□□□ -1.48
USP28-215ENST00000545608 FAM167A-AS1Q96KT0 104 aa5.81□□□□□ -1.48
USP28-215ENST00000545608 VGLL1Q99990 258 aa5.81□□□□□ -1.48
USP28-215ENST00000545608 C2orf88Q9BSF0 95 aa5.81□□□□□ -1.48
USP28-215ENST00000545608 SLC25A2Q9BXI2 301 aa5.81□□□□□ -1.48
USP28-215ENST00000545608 CYTL1Q9NRR1 136 aa5.81□□□□□ -1.48
USP28-215ENST00000545608 TP53TG3Q9ULZ0 132 aa5.81□□□□□ -1.48
USP28-215ENST00000545608 FUT9Q9Y231 359 aa5.81□□□□□ -1.48
USP28-215ENST00000545608 UMAD1C9J7I0 102 aa5.8□□□□□ -1.48
USP28-215ENST00000545608 MPDU1O75352 247 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms