RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 PRR9Q5T870 116 aa5.36□□□□□ -1.55
SNHG1-223ENST00000545440 ARL6IP6Q8N6S5 226 aa5.36□□□□□ -1.55
SNHG1-223ENST00000545440 Q8TAT8 98 aa5.36□□□□□ -1.55
SNHG1-223ENST00000545440 TMED6Q8WW62 240 aa5.36□□□□□ -1.55
SNHG1-223ENST00000545440 ATG101Q9BSB4 218 aa5.36□□□□□ -1.55
SNHG1-223ENST00000545440 OTORQ9NRC9 128 aa5.36□□□□□ -1.55
SNHG1-223ENST00000545440 LENEPQ9Y5L5 61 aa5.36□□□□□ -1.55
SNHG1-223ENST00000545440 DNAH10Q8IVF4 4471 aa5.36□□□□□ -1.55
SNHG1-223ENST00000545440 HECTD4Q9Y4D8 3996 aa5.36□□□□□ -1.55
SNHG1-223ENST00000545440 H3BNG1 76 aa5.35□□□□□ -1.55
SNHG1-223ENST00000545440 GAGE7O76087 117 aa5.35□□□□□ -1.55
SNHG1-223ENST00000545440 GAGE12FP0CL80 117 aa5.35□□□□□ -1.55
SNHG1-223ENST00000545440 GAGE12GP0CL81 117 aa5.35□□□□□ -1.55
SNHG1-223ENST00000545440 GAGE12IP0CL82 117 aa5.35□□□□□ -1.55
SNHG1-223ENST00000545440 CDC34P49427 236 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-223ENST00000545440 CCL18P55774 89 aa5.35□□□□□ -1.55
SNHG1-223ENST00000545440 FAM74A1Q5RGS3 127 aa5.35□□□□□ -1.55
SNHG1-223ENST00000545440 Q6ZTI0 123 aa5.35□□□□□ -1.55
SNHG1-223ENST00000545440 CMTM2Q8TAZ6 248 aa5.35□□□□□ -1.55
SNHG1-223ENST00000545440 TMEM18Q96B42 140 aa5.35□□□□□ -1.55
SNHG1-223ENST00000545440 GSN-AS1Q9NRJ2 163 aa5.35□□□□□ -1.55
SNHG1-223ENST00000545440 IGLV2-18A0A075B6J9 118 aa5.34□□□□□ -1.55
SNHG1-223ENST00000545440 IGHV1OR15-1A0A075B7D0 117 aa5.34□□□□□ -1.55
SNHG1-223ENST00000545440 TRAV26-1A0A087WT03 109 aa5.34□□□□□ -1.55
SNHG1-223ENST00000545440 M0R2N4 97 aa5.34□□□□□ -1.55
SNHG1-223ENST00000545440 RTL8CO15255 209 aa5.34□□□□□ -1.55
SNHG1-223ENST00000545440 SPINK4O60575 86 aa5.34□□□□□ -1.55
SNHG1-223ENST00000545440 MBP02144 154 aa5.34□□□□□ -1.55
SNHG1-223ENST00000545440 ARL14EPLP0DKL9 152 aa5.34□□□□□ -1.55
SNHG1-223ENST00000545440 ATP6V0CP27449 155 aa5.34□□□□□ -1.55
SNHG1-223ENST00000545440 SERF2P84101 59 aa5.34□□□□□ -1.55
SNHG1-223ENST00000545440 ZNF415Q09FC8 603 aa5.34□□□□□ -1.55
SNHG1-223ENST00000545440 OR5I1Q13606 314 aa5.34□□□□□ -1.55
SNHG1-223ENST00000545440 RGS21Q2M5E4 152 aa5.34□□□□□ -1.55
SNHG1-223ENST00000545440 SOHLH1Q5JUK2 328 aa5.34□□□□□ -1.55
SNHG1-223ENST00000545440 Q6AWC8 147 aa5.34□□□□□ -1.55
SNHG1-223ENST00000545440 HSD17B11Q8NBQ5 300 aa5.34□□□□□ -1.55
SNHG1-223ENST00000545440 INO80EQ8NBZ0 244 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-223ENST00000545440 OR10G4Q8NGN3 311 aa5.34□□□□□ -1.55
SNHG1-223ENST00000545440 OR10G9Q8NGN4 311 aa5.34□□□□□ -1.55
SNHG1-223ENST00000545440 OR10G7Q8NGN6 311 aa5.34□□□□□ -1.55
SNHG1-223ENST00000545440 ZNRF2Q8NHG8 242 aa5.34□□□□□ -1.55
SNHG1-223ENST00000545440 GNPNAT1Q96EK6 184 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-223ENST00000545440 TRGV2A0A075B6R0 118 aa5.33□□□□□ -1.56
SNHG1-223ENST00000545440 TRGV1A0A0A0MS02 117 aa5.33□□□□□ -1.56
SNHG1-223ENST00000545440 A0A1B0GVY2 172 aa5.33□□□□□ -1.56
SNHG1-223ENST00000545440 SERTM2A0A1B0GWG4 89 aa5.33□□□□□ -1.56
SNHG1-223ENST00000545440 RNF222A6NCQ9 220 aa5.33□□□□□ -1.56
SNHG1-223ENST00000545440 EIF3GO75821 320 aaKnown RBP eCLIP5.33□□□□□ -1.56
SNHG1-223ENST00000545440 STAG3L2P0CL84 134 aa5.33□□□□□ -1.56
SNHG1-223ENST00000545440 STAG3L3P0CL85 134 aa5.33□□□□□ -1.56
SNHG1-223ENST00000545440 TWIST1Q15672 202 aa5.33□□□□□ -1.56
SNHG1-223ENST00000545440 C5orf17Q8NAS9 161 aa5.33□□□□□ -1.56
SNHG1-223ENST00000545440 OR2T35Q8NGX2 323 aa5.33□□□□□ -1.56
SNHG1-223ENST00000545440 ST6GAL2Q96JF0 529 aa5.33□□□□□ -1.56
SNHG1-223ENST00000545440 HYLS1Q96M11 299 aa5.33□□□□□ -1.56
SNHG1-223ENST00000545440 TNFSF18Q9UNG2 199 aa5.33□□□□□ -1.56
SNHG1-223ENST00000545440 LINC00588Q9Y4M8 146 aa5.33□□□□□ -1.56
SNHG1-223ENST00000545440 KLF12Q9Y4X4 402 aa5.33□□□□□ -1.56
SNHG1-223ENST00000545440 FXYD6-FXYD2A0A087WZ82 144 aa5.32□□□□□ -1.56
SNHG1-223ENST00000545440 BORCS7-ASMTA0A0B4J1R7 106 aa5.32□□□□□ -1.56
SNHG1-223ENST00000545440 A0A0J9YY99 117 aa5.32□□□□□ -1.56
SNHG1-223ENST00000545440 NBDYA0A0U1RRE5 68 aa5.32□□□□□ -1.56
SNHG1-223ENST00000545440 PGPA6NDG6 321 aa5.32□□□□□ -1.56
SNHG1-223ENST00000545440 HMGB3O15347 200 aaKnown RBP5.32□□□□□ -1.56
SNHG1-223ENST00000545440 GCHFRP30047 84 aa5.32□□□□□ -1.56
SNHG1-223ENST00000545440 TDRG1Q3Y452 100 aa5.32□□□□□ -1.56
SNHG1-223ENST00000545440 Q5BKY6 102 aa5.32□□□□□ -1.56
SNHG1-223ENST00000545440 C1orf134Q5TEV5 83 aa5.32□□□□□ -1.56
SNHG1-223ENST00000545440 Q6ZQT7 251 aa5.32□□□□□ -1.56
SNHG1-223ENST00000545440 GOLT1AQ6ZVE7 132 aa5.32□□□□□ -1.56
SNHG1-223ENST00000545440 SSX7Q7RTT5 188 aa5.32□□□□□ -1.56
SNHG1-223ENST00000545440 SUN5Q8TC36 379 aa5.32□□□□□ -1.56
SNHG1-223ENST00000545440 UPK3BQ9BT76 320 aa5.32□□□□□ -1.56
SNHG1-223ENST00000545440 SH3BGRL3Q9H299 93 aa5.32□□□□□ -1.56
SNHG1-223ENST00000545440 TP53TG3Q9ULZ0 132 aa5.32□□□□□ -1.56
SNHG1-223ENST00000545440 RPH3ALQ9UNE2 315 aa5.32□□□□□ -1.56
SNHG1-223ENST00000545440 FAT2Q9NYQ8 4349 aa5.32□□□□□ -1.56
SNHG1-223ENST00000545440 TRAV8-1A0A0A6YYK1 113 aa5.31□□□□□ -1.56
SNHG1-223ENST00000545440 G3V3Q6 166 aa5.31□□□□□ -1.56
SNHG1-223ENST00000545440 K7EQM0 130 aa5.31□□□□□ -1.56
SNHG1-223ENST00000545440 CXorf1O96002 111 aa5.31□□□□□ -1.56
SNHG1-223ENST00000545440 TCRAP04437 139 aa5.31□□□□□ -1.56
SNHG1-223ENST00000545440 GNG5P63218 68 aa5.31□□□□□ -1.56
SNHG1-223ENST00000545440 TTC32Q5I0X7 151 aa5.31□□□□□ -1.56
SNHG1-223ENST00000545440 MUC21Q5SSG8 566 aa5.31□□□□□ -1.56
SNHG1-223ENST00000545440 RPL7L1Q6DKI1 246 aaKnown RBP5.31□□□□□ -1.56
SNHG1-223ENST00000545440 FAM159AQ6UWV7 190 aa5.31□□□□□ -1.56
SNHG1-223ENST00000545440 VSIG2Q96IQ7 327 aa5.31□□□□□ -1.56
SNHG1-223ENST00000545440 NDFIP1Q9BT67 221 aa5.31□□□□□ -1.56
SNHG1-223ENST00000545440 ACTR3CQ9C0K3 210 aaPredicted RBP5.31□□□□□ -1.56
SNHG1-223ENST00000545440 TMEM167BQ9NRX6 74 aa5.31□□□□□ -1.56
SNHG1-223ENST00000545440 MRPL16Q9NX20 251 aaKnown RBP5.31□□□□□ -1.56
SNHG1-223ENST00000545440 MRPS16Q9Y3D3 137 aaKnown RBP5.31□□□□□ -1.56
SNHG1-223ENST00000545440 DNAH2Q9P225 4427 aa5.31□□□□□ -1.56
SNHG1-223ENST00000545440 PKHD1P08F94 4074 aa5.3□□□□□ -1.56
SNHG1-223ENST00000545440 A0A096LPF7 62 aa5.3□□□□□ -1.56
SNHG1-223ENST00000545440 TRAV21A0A0B4J279 112 aa5.3□□□□□ -1.56
SNHG1-223ENST00000545440 CTXND1A0A1B0GTU2 59 aa5.3□□□□□ -1.56
SNHG1-223ENST00000545440 FBLL1A6NHQ2 334 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms