RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 ACTR3CQ9C0K3 210 aaPredicted RBP13.91□□□□□ -0.18
DDB1-220ENST00000542337 TMEM167BQ9NRX6 74 aa13.91□□□□□ -0.18
DDB1-220ENST00000542337 TRAV4A0A0B4J268 109 aa13.9□□□□□ -0.18
DDB1-220ENST00000542337 GNRH2O43555 120 aa13.9□□□□□ -0.18
DDB1-220ENST00000542337 CXorf1O96002 111 aa13.9□□□□□ -0.18
DDB1-220ENST00000542337 SFTA3P0C7M3 94 aa13.9□□□□□ -0.18
DDB1-220ENST00000542337 GCHFRP30047 84 aa13.9□□□□□ -0.18
DDB1-220ENST00000542337 ZNF479Q96JC4 524 aa13.9□□□□□ -0.18
DDB1-220ENST00000542337 TNFSF18Q9UNG2 199 aa13.9□□□□□ -0.18
DDB1-220ENST00000542337 TRAV9-2A0A087WT02 112 aa13.89□□□□□ -0.19
DDB1-220ENST00000542337 BORCS7-ASMTA0A0B4J1R7 106 aa13.89□□□□□ -0.19
DDB1-220ENST00000542337 IGHV3-16A0A0C4DH30 117 aa13.89□□□□□ -0.19
DDB1-220ENST00000542337 TXNDC17Q9BRA2 123 aa13.89□□□□□ -0.19
DDB1-220ENST00000542337 C9JCJ5 164 aa13.88□□□□□ -0.19
DDB1-220ENST00000542337 TCRAP04437 139 aa13.88□□□□□ -0.19
DDB1-220ENST00000542337 GYPEP15421 78 aa13.88□□□□□ -0.19
DDB1-220ENST00000542337 SPATA12Q7Z6I5 190 aa13.88□□□□□ -0.19
DDB1-220ENST00000542337 SUN5Q8TC36 379 aa13.88□□□□□ -0.19
DDB1-220ENST00000542337 TVP23CQ96ET8 276 aa13.88□□□□□ -0.19
DDB1-220ENST00000542337 SGK494Q96LW2 274 aa13.88□□□□□ -0.19
DDB1-220ENST00000542337 K7EQD1 137 aa13.87□□□□□ -0.19
DDB1-220ENST00000542337 TAAR5O14804 337 aa13.87□□□□□ -0.19
DDB1-220ENST00000542337 TYMSP04818 313 aa13.87□□□□□ -0.19
DDB1-220ENST00000542337 LINC00315P59091 139 aa13.87□□□□□ -0.19
DDB1-220ENST00000542337 SUMO1P63165 101 aaKnown RBP13.87□□□□□ -0.19
DDB1-220ENST00000542337 ZFP69Q49AA0 526 aa13.87□□□□□ -0.19
DDB1-220ENST00000542337 FXYD6-FXYD2A0A087WZ82 144 aa13.86□□□□□ -0.19
DDB1-220ENST00000542337 FBLL1A6NHQ2 334 aaKnown RBP13.86□□□□□ -0.19
DDB1-220ENST00000542337 Q5BKY6 102 aa13.86□□□□□ -0.19
DDB1-220ENST00000542337 SH2D6Q7Z4S9 175 aa13.86□□□□□ -0.19
DDB1-220ENST00000542337 SH3BGRL3Q9H299 93 aa13.86□□□□□ -0.19
DDB1-220ENST00000542337 PSG8Q9UQ74 426 aa13.86□□□□□ -0.19
DDB1-220ENST00000542337 EREGO14944 169 aa13.85□□□□□ -0.19
DDB1-220ENST00000542337 SMUG1Q53HV7 270 aa13.85□□□□□ -0.19
DDB1-220ENST00000542337 SAPCD1Q5SSQ6 148 aa13.85□□□□□ -0.19
DDB1-220ENST00000542337 NFE4Q86UQ8 179 aa13.85□□□□□ -0.19
DDB1-220ENST00000542337 EPDR1Q9UM22 224 aa13.85□□□□□ -0.19
DDB1-220ENST00000542337 LY96Q9Y6Y9 160 aa13.85□□□□□ -0.19
DDB1-220ENST00000542337 K7EP13 123 aa13.84□□□□□ -0.19
DDB1-220ENST00000542337 CDK2AP2O75956 126 aa13.84□□□□□ -0.19
DDB1-220ENST00000542337 FLI1Q01543 452 aaPredicted RBP13.84□□□□□ -0.19
DDB1-220ENST00000542337 RPL7L1Q6DKI1 246 aaKnown RBP13.84□□□□□ -0.19
DDB1-220ENST00000542337 PRNTQ86SH4 94 aa13.84□□□□□ -0.19
DDB1-220ENST00000542337 CYB561D1Q8N8Q1 229 aa13.84□□□□□ -0.19
DDB1-220ENST00000542337 OR2T35Q8NGX2 323 aa13.84□□□□□ -0.19
DDB1-220ENST00000542337 GCGP01275 180 aa13.83□□□□□ -0.2
DDB1-220ENST00000542337 EVI2AP22794 236 aa13.83□□□□□ -0.2
DDB1-220ENST00000542337 A0A1W2PRE2 83 aa13.82□□□□□ -0.2
DDB1-220ENST00000542337 CIDEAO60543 219 aa13.82□□□□□ -0.2
DDB1-220ENST00000542337 PFN1P07737 140 aaKnown RBP13.82□□□□□ -0.2
DDB1-220ENST00000542337 PPT1P50897 306 aa13.82□□□□□ -0.2
DDB1-220ENST00000542337 ZNF876PQ49A33 203 aa13.82□□□□□ -0.2
DDB1-220ENST00000542337 TMEM75Q8N9X5 138 aa13.82□□□□□ -0.2
DDB1-220ENST00000542337 NHLRC2Q8NBF2 726 aa13.82□□□□□ -0.2
DDB1-220ENST00000542337 GGTLC3B5MD39 225 aa13.81□□□□□ -0.2
DDB1-220ENST00000542337 IFNA7P01567 189 aa13.81□□□□□ -0.2
DDB1-220ENST00000542337 AKR1C8PQ5T2L2 129 aa13.81□□□□□ -0.2
DDB1-220ENST00000542337 CTXND1A0A1B0GTU2 59 aa13.8□□□□□ -0.2
DDB1-220ENST00000542337 RNF222A6NCQ9 220 aa13.8□□□□□ -0.2
DDB1-220ENST00000542337 ZNF80P51504 273 aaPredicted RBP13.8□□□□□ -0.2
DDB1-220ENST00000542337 ERVFC1-1P60608 527 aa13.8□□□□□ -0.2
DDB1-220ENST00000542337 RGS21Q2M5E4 152 aa13.8□□□□□ -0.2
DDB1-220ENST00000542337 PRADC1Q9BSG0 188 aa13.8□□□□□ -0.2
DDB1-220ENST00000542337 NKX6-2Q9C056 277 aaPredicted RBP13.8□□□□□ -0.2
DDB1-220ENST00000542337 IGLV2-11P01706 119 aa13.79□□□□□ -0.2
DDB1-220ENST00000542337 GATA1P15976 413 aaPredicted RBP13.79□□□□□ -0.2
DDB1-220ENST00000542337 Q6ZRN7 208 aaPredicted RBP13.79□□□□□ -0.2
DDB1-220ENST00000542337 PCLOQ9Y6V0 5065 aa13.78□□□□□ -0.2
DDB1-220ENST00000542337 PGPEP1Q9NXJ5 209 aa13.78□□□□□ -0.2
DDB1-220ENST00000542337 BOLA1Q9Y3E2 137 aa13.78□□□□□ -0.2
DDB1-220ENST00000542337 RYR1P21817 5038 aa13.77□□□□□ -0.2
DDB1-220ENST00000542337 RS1O15537 224 aa13.77□□□□□ -0.21
DDB1-220ENST00000542337 S100A4P26447 101 aaKnown RBP13.77□□□□□ -0.21
DDB1-220ENST00000542337 KRTAP10-2P60368 255 aa13.77□□□□□ -0.21
DDB1-220ENST00000542337 UBE2G2P60604 165 aa13.77□□□□□ -0.21
DDB1-220ENST00000542337 CFAP126Q5VTH2 177 aa13.77□□□□□ -0.21
DDB1-220ENST00000542337 WFDC10BQ8IUB3 73 aa13.77□□□□□ -0.21
DDB1-220ENST00000542337 C10orf126Q8N4M7 172 aa13.77□□□□□ -0.21
DDB1-220ENST00000542337 PTH2Q96A98 100 aa13.77□□□□□ -0.21
DDB1-220ENST00000542337 MSRB1Q9NZV6 116 aa13.77□□□□□ -0.21
DDB1-220ENST00000542337 C11orf21Q9P2W6 132 aa13.77□□□□□ -0.21
DDB1-220ENST00000542337 TRAV34A0A0B4J273 112 aa13.76□□□□□ -0.21
DDB1-220ENST00000542337 LOC100131303A0A0U1RQF7 123 aa13.76□□□□□ -0.21
DDB1-220ENST00000542337 FABP5P3A8MUU1 101 aa13.76□□□□□ -0.21
DDB1-220ENST00000542337 DNAH10OSP0CZ25 163 aa13.76□□□□□ -0.21
DDB1-220ENST00000542337 TIRAPP58753 221 aa13.76□□□□□ -0.21
DDB1-220ENST00000542337 RHOHQ15669 191 aa13.76□□□□□ -0.21
DDB1-220ENST00000542337 HIST1H2BAQ96A08 127 aa13.76□□□□□ -0.21
DDB1-220ENST00000542337 C9orf85Q96MD7 179 aa13.76□□□□□ -0.21
DDB1-220ENST00000542337 TRAV8-6A0A0B4J262 113 aa13.75□□□□□ -0.21
DDB1-220ENST00000542337 TRBV6-4A0A1B0GX49 114 aa13.75□□□□□ -0.21
DDB1-220ENST00000542337 ARPC5O15511 151 aa13.75□□□□□ -0.21
DDB1-220ENST00000542337 CRYGDP07320 174 aa13.75□□□□□ -0.21
DDB1-220ENST00000542337 ZNF726P1Q15940 193 aa13.75□□□□□ -0.21
DDB1-220ENST00000542337 MAPKAPK5-AS1Q8N8E1 139 aa13.75□□□□□ -0.21
DDB1-220ENST00000542337 SLC25A29Q8N8R3 303 aa13.75□□□□□ -0.21
DDB1-220ENST00000542337 LINC00479Q96M42 142 aa13.75□□□□□ -0.21
DDB1-220ENST00000542337 TNFRSF18Q9Y5U5 241 aa13.75□□□□□ -0.21
DDB1-220ENST00000542337 IGHV3-73A0A0B4J1V6 119 aa13.74□□□□□ -0.21
DDB1-220ENST00000542337 PEX7O00628 323 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms