RNA–Protein interactions for RNA: ENST00000542279.5

GTF2H3-209, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-209ENST00000542279 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.34□□□□□ -2.19
GTF2H3-209ENST00000542279 C1orf140Q5VVS0 124 aa1.34□□□□□ -2.19
GTF2H3-209ENST00000542279 C22orf39Q6P5X5 142 aa1.34□□□□□ -2.19
GTF2H3-209ENST00000542279 GTF2H5Q6ZYL4 71 aa1.34□□□□□ -2.19
GTF2H3-209ENST00000542279 AAED1Q7RTV5 226 aa1.34□□□□□ -2.19
GTF2H3-209ENST00000542279 LINC00305Q7Z4B0 112 aa1.34□□□□□ -2.19
GTF2H3-209ENST00000542279 BPIFA4PQ86YQ2 179 aa1.34□□□□□ -2.19
GTF2H3-209ENST00000542279 Q8N2B8 174 aa1.34□□□□□ -2.19
GTF2H3-209ENST00000542279 C10orf126Q8N4M7 172 aa1.34□□□□□ -2.19
GTF2H3-209ENST00000542279 TTC9CQ8N5M4 171 aa1.34□□□□□ -2.19
GTF2H3-209ENST00000542279 LINC00301Q8NCQ3 95 aa1.34□□□□□ -2.19
GTF2H3-209ENST00000542279 LCN9Q8WX39 176 aa1.34□□□□□ -2.19
GTF2H3-209ENST00000542279 HIST1H2BHQ93079 126 aa1.34□□□□□ -2.19
GTF2H3-209ENST00000542279 HIST1H2BNQ99877 126 aa1.34□□□□□ -2.19
GTF2H3-209ENST00000542279 HIST1H2BMQ99879 126 aa1.34□□□□□ -2.19
GTF2H3-209ENST00000542279 SEC11CQ9BY50 192 aa1.34□□□□□ -2.19
GTF2H3-209ENST00000542279 CYSTM1Q9H1C7 97 aa1.34□□□□□ -2.19
GTF2H3-209ENST00000542279 MLH3Q9UHC1 1453 aa1.34□□□□□ -2.19
GTF2H3-209ENST00000542279 MROH2AA6NES4 1674 aa1.34□□□□□ -2.19
GTF2H3-209ENST00000542279 ESPL1Q14674 2120 aa1.34□□□□□ -2.2
GTF2H3-209ENST00000542279 EPRSP07814 1512 aaKnown RBP1.34□□□□□ -2.2
GTF2H3-209ENST00000542279 DLC1Q96QB1 1528 aa1.34□□□□□ -2.2
GTF2H3-209ENST00000542279 ABCA8O94911 1581 aa1.34□□□□□ -2.2
GTF2H3-209ENST00000542279 MUC6Q6W4X9 2439 aa1.34□□□□□ -2.2
GTF2H3-209ENST00000542279 KTN1Q86UP2 1357 aaKnown RBP1.34□□□□□ -2.2
GTF2H3-209ENST00000542279 NESP48681 1621 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 NINQ8N4C6 2090 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 UACAQ9BZF9 1416 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 MGAMO43451 1857 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 RGPD1P0DJD0 1748 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 TRAV9-1A0A075B6T8 112 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 IGHV1-58A0A0C4DH39 117 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 RBAKDNA6NC62 111 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 CDC42EP2O14613 210 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 OR1I1O60431 355 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 SDC2P34741 201 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 ZNF93P35789 620 aaPredicted RBP1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 QRFPP83859 136 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 RRN3P1Q2M238 152 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 LINC01554Q52M75 96 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 SPRNQ5BIV9 151 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 MIC13Q5XKP0 118 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 Q6ZS92 163 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 C7orf65Q6ZTY9 151 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 HIST3H2BBQ8N257 126 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 KCNRGQ8N5I3 272 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 OR8B3Q8NGG8 313 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 OTOSQ8NHW6 89 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 C10orf105Q8TEF2 133 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 TOMM6Q96B49 74 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 Q96M85 177 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 MRPL32Q9BYC8 188 aaKnown RBP1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 TCEAL2Q9H3H9 227 aaPredicted RBP1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 Q9H521 79 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 RPRMQ9NS64 109 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 MED9Q9NWA0 146 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 FKBP11Q9NYL4 201 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 DNAJC15Q9Y5T4 150 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 ABCC3O15438 1527 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 PRDM15P57071 1507 aaPredicted RBP1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 RP1L1Q8IWN7 2480 aaPredicted RBP1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 MED1Q15648 1581 aaPredicted RBP1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 DOCK11Q5JSL3 2073 aa1.33□□□□□ -2.2
GTF2H3-209ENST00000542279 RRBP1Q9P2E9 1410 aaKnown RBP1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 NUP188Q5SRE5 1749 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 SHANK2Q9UPX8 1470 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 LAMB1P07942 1786 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 TRAV13-1A0A0B4J241 112 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 A6NN06 94 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 H3BQ15 152 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 GEMIN2O14893 280 aaKnown RBP1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 CRPP02741 224 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 MT-ND6P03923 174 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 CD3DP04234 171 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 NFYAP23511 347 aaPredicted RBP1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 DYNLT3P51808 116 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 FXYD2P54710 66 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 KLRD1Q13241 179 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 SPANXN3Q5MJ09 141 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 C9orf153Q5TBE3 101 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 MRPL54Q6P161 138 aaKnown RBP1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 IZUMO2Q6UXV1 221 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 PATE2Q6UY27 113 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 SOSTDC1Q6X4U4 206 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 PPTC7Q8NI37 304 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 AMELYQ99218 206 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 SNRNP25Q9BV90 132 aaKnown RBP1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 TMEM191AQ9H0A3 160 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 AGPAT4-IT1Q9H0P7 198 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 TAS2R8Q9NYW2 309 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 EPDR1Q9UM22 224 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 MPC1Q9Y5U8 109 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 IER3IP1Q9Y5U9 82 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 CHCHD2Q9Y6H1 151 aaPredicted RBP1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 COL4A6Q14031 1691 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 KDM6AO15550 1401 aaPredicted RBP1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 EEA1Q15075 1411 aa1.32□□□□□ -2.2
GTF2H3-209ENST00000542279 HEATR1Q9H583 2144 aaKnown RBP1.31□□□□□ -2.2
GTF2H3-209ENST00000542279 CFTRP13569 1480 aa1.31□□□□□ -2.2
GTF2H3-209ENST00000542279 NLRP1Q9C000 1473 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms